RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 C1orf64Q8NEQ6 169 aa10.34□□□□□ -0.75
HPS3-207ENST00000494327 LINC00208Q96KT6 92 aa10.34□□□□□ -0.75
HPS3-207ENST00000494327 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
HPS3-207ENST00000494327 SSPOA2VEC9 5147 aa10.32□□□□□ -0.76
HPS3-207ENST00000494327 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
HPS3-207ENST00000494327 S4R3F8 94 aa10.27□□□□□ -0.77
HPS3-207ENST00000494327 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
HPS3-207ENST00000494327 COX7CP15954 63 aa10.24□□□□□ -0.77
HPS3-207ENST00000494327 KRTAP19-1Q8IUB9 90 aa10.22□□□□□ -0.77
HPS3-207ENST00000494327 LCA10Q71F78 164 aa10.19□□□□□ -0.78
HPS3-207ENST00000494327 C20orf197Q8N268 126 aa10.19□□□□□ -0.78
HPS3-207ENST00000494327 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
HPS3-207ENST00000494327 KLKP1Q107X0 134 aa10.16□□□□□ -0.78
HPS3-207ENST00000494327 SNURFQ9Y675 71 aa10.15□□□□□ -0.78
HPS3-207ENST00000494327 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.09□□□□□ -0.79
HPS3-207ENST00000494327 FCGBPQ9Y6R7 5405 aaPredicted RBP10.08□□□□□ -0.8
HPS3-207ENST00000494327 KRTAP19-6Q3LI70 58 aa10.02□□□□□ -0.81
HPS3-207ENST00000494327 CCDC179H3BU77 68 aa10.01□□□□□ -0.81
HPS3-207ENST00000494327 KRTAP9-7A8MTY7 169 aa10□□□□□ -0.81
HPS3-207ENST00000494327 NDUFC1O43677 76 aa9.99□□□□□ -0.81
HPS3-207ENST00000494327 A8MUN3 132 aa9.93□□□□□ -0.82
HPS3-207ENST00000494327 SPANXA2-OT1Q8N9U9 137 aa9.92□□□□□ -0.82
HPS3-207ENST00000494327 CYSTM1Q9H1C7 97 aa9.92□□□□□ -0.82
HPS3-207ENST00000494327 H7BZZ5 65 aa9.9□□□□□ -0.82
HPS3-207ENST00000494327 DMAC1Q96GE9 116 aa9.87□□□□□ -0.83
HPS3-207ENST00000494327 SPRR2GQ9BYE4 73 aa9.84□□□□□ -0.83
HPS3-207ENST00000494327 ACYP2P14621 99 aa9.82□□□□□ -0.84
HPS3-207ENST00000494327 PCP4P48539 62 aa9.82□□□□□ -0.84
HPS3-207ENST00000494327 Q5VV11 94 aa9.8□□□□□ -0.84
HPS3-207ENST00000494327 MT1BP07438 61 aa9.77□□□□□ -0.85
HPS3-207ENST00000494327 KRTAP19-8Q3LI54 63 aa9.76□□□□□ -0.85
HPS3-207ENST00000494327 CRIPTQ9P021 101 aa9.73□□□□□ -0.85
HPS3-207ENST00000494327 H0YAA0 97 aa9.7□□□□□ -0.86
HPS3-207ENST00000494327 MACF1Q9UPN3 7388 aaKnown RBP9.69□□□□□ -0.86
HPS3-207ENST00000494327 ATP5EP56381 51 aaPredicted RBP9.68□□□□□ -0.86
HPS3-207ENST00000494327 TMEM258P61165 79 aa9.68□□□□□ -0.86
HPS3-207ENST00000494327 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
HPS3-207ENST00000494327 A6NN06 94 aa9.66□□□□□ -0.86
HPS3-207ENST00000494327 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
HPS3-207ENST00000494327 COA5Q86WW8 74 aa9.6□□□□□ -0.87
HPS3-207ENST00000494327 SYNE2Q8WXH0 6885 aaKnown RBP9.59□□□□□ -0.87
HPS3-207ENST00000494327 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
HPS3-207ENST00000494327 KRTAP10-5P60370 271 aa9.52□□□□□ -0.89
HPS3-207ENST00000494327 P0C880 135 aa9.46□□□□□ -0.9
HPS3-207ENST00000494327 KRTAP6-3Q3LI67 103 aa9.46□□□□□ -0.9
HPS3-207ENST00000494327 R4GN34 69 aa9.42□□□□□ -0.9
HPS3-207ENST00000494327 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.9
HPS3-207ENST00000494327 KRTAP4-8Q9BYQ9 185 aa9.37□□□□□ -0.91
HPS3-207ENST00000494327 M0QZ58 72 aa9.36□□□□□ -0.91
HPS3-207ENST00000494327 PLAC4Q8WY50 150 aa9.32□□□□□ -0.92
HPS3-207ENST00000494327 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
HPS3-207ENST00000494327 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
HPS3-207ENST00000494327 SEC61GP60059 68 aa9.21□□□□□ -0.94
HPS3-207ENST00000494327 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
HPS3-207ENST00000494327 MT1XP80297 61 aa9.19□□□□□ -0.94
HPS3-207ENST00000494327 LINC01558Q9Y6Z2 57 aa9.12□□□□□ -0.95
HPS3-207ENST00000494327 A0A1B0GU69 56 aa9.11□□□□□ -0.95
HPS3-207ENST00000494327 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
HPS3-207ENST00000494327 PRR15LQ9BU68 103 aa9.06□□□□□ -0.96
HPS3-207ENST00000494327 V9GYY9 64 aa9.05□□□□□ -0.96
HPS3-207ENST00000494327 KRTAP5-9P26371 169 aa9.04□□□□□ -0.96
HPS3-207ENST00000494327 MUC12Q9UKN1 5478 aa9.01□□□□□ -0.97
HPS3-207ENST00000494327 Q1T7F1 81 aa9□□□□□ -0.97
HPS3-207ENST00000494327 NEBP20929 6669 aa8.98□□□□□ -0.97
HPS3-207ENST00000494327 A0A1B0GU33 70 aa8.96□□□□□ -0.98
HPS3-207ENST00000494327 KMT2DO14686 5537 aa8.92□□□□□ -0.98
HPS3-207ENST00000494327 KRTAP12-2P59991 146 aa8.91□□□□□ -0.98
HPS3-207ENST00000494327 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
HPS3-207ENST00000494327 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
HPS3-207ENST00000494327 KRTAP13-4Q3LI77 160 aa8.87□□□□□ -0.99
HPS3-207ENST00000494327 SPRR2FQ96RM1 72 aa8.87□□□□□ -0.99
HPS3-207ENST00000494327 PSPHP1O15172 72 aa8.86□□□□□ -0.99
HPS3-207ENST00000494327 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
HPS3-207ENST00000494327 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
HPS3-207ENST00000494327 KRTAP10-7P60409 375 aaPredicted RBP8.8□□□□□ -1
HPS3-207ENST00000494327 KRTAP4-12Q9BQ66 201 aa8.8□□□□□ -1
HPS3-207ENST00000494327 MDN1Q9NU22 5596 aa8.79□□□□□ -1
HPS3-207ENST00000494327 UQCR11O14957 56 aa8.77□□□□□ -1.01
HPS3-207ENST00000494327 KRTAP9-9Q9BYP9 154 aa8.76□□□□□ -1.01
HPS3-207ENST00000494327 KRTAP9-4Q9BYQ2 154 aa8.76□□□□□ -1.01
HPS3-207ENST00000494327 KRTAP20-1Q3LI63 56 aa8.73□□□□□ -1.01
HPS3-207ENST00000494327 SPRR2EP22531 72 aa8.72□□□□□ -1.01
HPS3-207ENST00000494327 SPRR2BP35325 72 aa8.72□□□□□ -1.01
HPS3-207ENST00000494327 SPRR2AP35326 72 aa8.72□□□□□ -1.01
HPS3-207ENST00000494327 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
HPS3-207ENST00000494327 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.02
HPS3-207ENST00000494327 A0A0D9SG42 100 aa8.68□□□□□ -1.02
HPS3-207ENST00000494327 MIR22HGQ0VDD5 57 aa8.63□□□□□ -1.03
HPS3-207ENST00000494327 A6NED7 52 aa8.61□□□□□ -1.03
HPS3-207ENST00000494327 A8MU10 97 aa8.61□□□□□ -1.03
HPS3-207ENST00000494327 LCE1AQ5T7P2 110 aa8.58□□□□□ -1.04
HPS3-207ENST00000494327 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
HPS3-207ENST00000494327 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
HPS3-207ENST00000494327 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
HPS3-207ENST00000494327 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
HPS3-207ENST00000494327 SPRR2DP22532 72 aa8.42□□□□□ -1.06
HPS3-207ENST00000494327 KRTAP4-7Q9BYR0 210 aa8.41□□□□□ -1.06
HPS3-207ENST00000494327 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
HPS3-207ENST00000494327 K7ERS5 55 aa8.36□□□□□ -1.07
HPS3-207ENST00000494327 LCE1DQ5T752 114 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms