RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 MT2AP02795 61 aa7.99□□□□□ -1.13
HCLS1-210ENST00000491824 NDUFC1O43677 76 aa7.98□□□□□ -1.13
HCLS1-210ENST00000491824 SNURFQ9Y675 71 aa7.97□□□□□ -1.13
HCLS1-210ENST00000491824 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.14
HCLS1-210ENST00000491824 MT1FP04733 61 aa7.92□□□□□ -1.14
HCLS1-210ENST00000491824 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
HCLS1-210ENST00000491824 S4R3F8 94 aa7.89□□□□□ -1.15
HCLS1-210ENST00000491824 H7BZZ5 65 aa7.86□□□□□ -1.15
HCLS1-210ENST00000491824 KRTAP9-7A8MTY7 169 aa7.84□□□□□ -1.15
HCLS1-210ENST00000491824 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
HCLS1-210ENST00000491824 ACYP2P14621 99 aa7.83□□□□□ -1.16
HCLS1-210ENST00000491824 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
HCLS1-210ENST00000491824 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
HCLS1-210ENST00000491824 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
HCLS1-210ENST00000491824 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
HCLS1-210ENST00000491824 LCA10Q71F78 164 aa7.79□□□□□ -1.16
HCLS1-210ENST00000491824 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
HCLS1-210ENST00000491824 LCE2BO14633 110 aa7.71□□□□□ -1.18
HCLS1-210ENST00000491824 ATP5EP56381 51 aaPredicted RBP7.71□□□□□ -1.18
HCLS1-210ENST00000491824 TMEM258P61165 79 aa7.67□□□□□ -1.18
HCLS1-210ENST00000491824 USH2AO75445 5202 aa7.67□□□□□ -1.18
HCLS1-210ENST00000491824 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
HCLS1-210ENST00000491824 H0YAA0 97 aa7.64□□□□□ -1.19
HCLS1-210ENST00000491824 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
HCLS1-210ENST00000491824 PCP4P48539 62 aa7.63□□□□□ -1.19
HCLS1-210ENST00000491824 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
HCLS1-210ENST00000491824 COA5Q86WW8 74 aa7.6□□□□□ -1.19
HCLS1-210ENST00000491824 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
HCLS1-210ENST00000491824 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
HCLS1-210ENST00000491824 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
HCLS1-210ENST00000491824 KRTAP19-6Q3LI70 58 aa7.47□□□□□ -1.21
HCLS1-210ENST00000491824 Q5VV11 94 aa7.46□□□□□ -1.22
HCLS1-210ENST00000491824 SPRR2GQ9BYE4 73 aa7.45□□□□□ -1.22
HCLS1-210ENST00000491824 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
HCLS1-210ENST00000491824 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
HCLS1-210ENST00000491824 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
HCLS1-210ENST00000491824 SYNE2Q8WXH0 6885 aaKnown RBP7.37□□□□□ -1.23
HCLS1-210ENST00000491824 KRTAP19-8Q3LI54 63 aa7.35□□□□□ -1.23
HCLS1-210ENST00000491824 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
HCLS1-210ENST00000491824 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
HCLS1-210ENST00000491824 P0C880 135 aa7.32□□□□□ -1.24
HCLS1-210ENST00000491824 SEC61GP60059 68 aa7.3□□□□□ -1.24
HCLS1-210ENST00000491824 A6NN06 94 aa7.29□□□□□ -1.24
HCLS1-210ENST00000491824 MT1BP07438 61 aa7.29□□□□□ -1.24
HCLS1-210ENST00000491824 R4GN34 69 aa7.28□□□□□ -1.24
HCLS1-210ENST00000491824 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
HCLS1-210ENST00000491824 M0QZ58 72 aa7.24□□□□□ -1.25
HCLS1-210ENST00000491824 A0A1B0GU69 56 aa7.21□□□□□ -1.26
HCLS1-210ENST00000491824 V9GYY9 64 aa7.2□□□□□ -1.26
HCLS1-210ENST00000491824 SMIM26A0A096LP01 95 aa7.19□□□□□ -1.26
HCLS1-210ENST00000491824 PRR15LQ9BU68 103 aa7.19□□□□□ -1.26
HCLS1-210ENST00000491824 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
HCLS1-210ENST00000491824 Q1T7F1 81 aa7.16□□□□□ -1.26
HCLS1-210ENST00000491824 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
HCLS1-210ENST00000491824 A0A1B0GU33 70 aa7.12□□□□□ -1.27
HCLS1-210ENST00000491824 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
HCLS1-210ENST00000491824 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
HCLS1-210ENST00000491824 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
HCLS1-210ENST00000491824 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
HCLS1-210ENST00000491824 UQCR11O14957 56 aa6.97□□□□□ -1.29
HCLS1-210ENST00000491824 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
HCLS1-210ENST00000491824 NEBP20929 6669 aa6.91□□□□□ -1.3
HCLS1-210ENST00000491824 PSPHP1O15172 72 aa6.9□□□□□ -1.3
HCLS1-210ENST00000491824 MT1XP80297 61 aa6.89□□□□□ -1.31
HCLS1-210ENST00000491824 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
HCLS1-210ENST00000491824 KRTAP20-1Q3LI63 56 aa6.84□□□□□ -1.31
HCLS1-210ENST00000491824 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
HCLS1-210ENST00000491824 A0A0D9SG42 100 aa6.8□□□□□ -1.32
HCLS1-210ENST00000491824 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
HCLS1-210ENST00000491824 A8MU10 97 aa6.77□□□□□ -1.33
HCLS1-210ENST00000491824 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
HCLS1-210ENST00000491824 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
HCLS1-210ENST00000491824 A6NED7 52 aa6.74□□□□□ -1.33
HCLS1-210ENST00000491824 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
HCLS1-210ENST00000491824 SPINT4Q6UDR6 99 aa6.71□□□□□ -1.34
HCLS1-210ENST00000491824 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
HCLS1-210ENST00000491824 SPRR2FQ96RM1 72 aa6.63□□□□□ -1.35
HCLS1-210ENST00000491824 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
HCLS1-210ENST00000491824 K7ERS5 55 aa6.62□□□□□ -1.35
HCLS1-210ENST00000491824 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
HCLS1-210ENST00000491824 KMT2DO14686 5537 aa6.58□□□□□ -1.36
HCLS1-210ENST00000491824 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
HCLS1-210ENST00000491824 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
HCLS1-210ENST00000491824 SPRR2EP22531 72 aa6.51□□□□□ -1.37
HCLS1-210ENST00000491824 SPRR2BP35325 72 aa6.51□□□□□ -1.37
HCLS1-210ENST00000491824 SPRR2AP35326 72 aa6.51□□□□□ -1.37
HCLS1-210ENST00000491824 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
HCLS1-210ENST00000491824 KRTAP2-3P0C7H8 128 aa6.5□□□□□ -1.37
HCLS1-210ENST00000491824 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
HCLS1-210ENST00000491824 KRTAP2-4Q9BYR9 128 aa6.5□□□□□ -1.37
HCLS1-210ENST00000491824 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
HCLS1-210ENST00000491824 TNP1P09430 55 aa6.36□□□□□ -1.39
HCLS1-210ENST00000491824 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
HCLS1-210ENST00000491824 BRK1Q8WUW1 75 aa6.34□□□□□ -1.39
HCLS1-210ENST00000491824 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
HCLS1-210ENST00000491824 SPRR2DP22532 72 aa6.3□□□□□ -1.4
HCLS1-210ENST00000491824 KRTAP2-2Q9BYT5 123 aa6.27□□□□□ -1.41
HCLS1-210ENST00000491824 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
HCLS1-210ENST00000491824 ROMO1P60602 79 aa6.25□□□□□ -1.41
HCLS1-210ENST00000491824 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms