RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MPLKIPQ8TAP9 179 aa5.35□□□□□ -1.55
TTC28-207ENST00000490475 LINC00208Q96KT6 92 aa5.35□□□□□ -1.55
TTC28-207ENST00000490475 MMP24-AS1A0A0U1RRL7 71 aa5.33□□□□□ -1.56
TTC28-207ENST00000490475 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
TTC28-207ENST00000490475 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
TTC28-207ENST00000490475 C8orf17Q9NRJ1 99 aa5.28□□□□□ -1.56
TTC28-207ENST00000490475 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
TTC28-207ENST00000490475 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
TTC28-207ENST00000490475 MRPL34Q9BQ48 92 aaKnown RBP5.25□□□□□ -1.57
TTC28-207ENST00000490475 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
TTC28-207ENST00000490475 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
TTC28-207ENST00000490475 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
TTC28-207ENST00000490475 Q5VV11 94 aa5.21□□□□□ -1.58
TTC28-207ENST00000490475 C7orf65Q6ZTY9 151 aa5.21□□□□□ -1.58
TTC28-207ENST00000490475 COA5Q86WW8 74 aa5.21□□□□□ -1.58
TTC28-207ENST00000490475 LCA10Q71F78 164 aa5.2□□□□□ -1.58
TTC28-207ENST00000490475 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
TTC28-207ENST00000490475 A8MUN3 132 aa5.19□□□□□ -1.58
TTC28-207ENST00000490475 PSPHP1O15172 72 aa5.19□□□□□ -1.58
TTC28-207ENST00000490475 A6NN06 94 aa5.18□□□□□ -1.58
TTC28-207ENST00000490475 HRES1P13985 223 aa5.17□□□□□ -1.58
TTC28-207ENST00000490475 SPINK7P58062 85 aa5.17□□□□□ -1.58
TTC28-207ENST00000490475 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
TTC28-207ENST00000490475 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
TTC28-207ENST00000490475 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
TTC28-207ENST00000490475 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
TTC28-207ENST00000490475 MT2AP02795 61 aa5.13□□□□□ -1.59
TTC28-207ENST00000490475 ACYP2P14621 99 aa5.13□□□□□ -1.59
TTC28-207ENST00000490475 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
TTC28-207ENST00000490475 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
TTC28-207ENST00000490475 Q5W150 140 aa5.12□□□□□ -1.59
TTC28-207ENST00000490475 A6NED7 52 aa5.1□□□□□ -1.59
TTC28-207ENST00000490475 H3BS24 57 aa5.1□□□□□ -1.59
TTC28-207ENST00000490475 DMAC1Q96GE9 116 aa5.09□□□□□ -1.59
TTC28-207ENST00000490475 USH2AO75445 5202 aa5.09□□□□□ -1.59
TTC28-207ENST00000490475 MT1FP04733 61 aa5.08□□□□□ -1.6
TTC28-207ENST00000490475 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
TTC28-207ENST00000490475 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
TTC28-207ENST00000490475 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
TTC28-207ENST00000490475 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
TTC28-207ENST00000490475 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
TTC28-207ENST00000490475 LCE2BO14633 110 aa5.04□□□□□ -1.6
TTC28-207ENST00000490475 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
TTC28-207ENST00000490475 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
TTC28-207ENST00000490475 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
TTC28-207ENST00000490475 A8MU10 97 aa4.98□□□□□ -1.61
TTC28-207ENST00000490475 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.62
TTC28-207ENST00000490475 A0A1B0GU69 56 aa4.95□□□□□ -1.62
TTC28-207ENST00000490475 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
TTC28-207ENST00000490475 SPATA8Q6RVD6 105 aa4.94□□□□□ -1.62
TTC28-207ENST00000490475 UQCR11O14957 56 aa4.92□□□□□ -1.62
TTC28-207ENST00000490475 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
TTC28-207ENST00000490475 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
TTC28-207ENST00000490475 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
TTC28-207ENST00000490475 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
TTC28-207ENST00000490475 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
TTC28-207ENST00000490475 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
TTC28-207ENST00000490475 S4R3F8 94 aa4.8□□□□□ -1.64
TTC28-207ENST00000490475 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
TTC28-207ENST00000490475 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
TTC28-207ENST00000490475 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
TTC28-207ENST00000490475 A0A1B0GU33 70 aa4.67□□□□□ -1.66
TTC28-207ENST00000490475 ROMO1P60602 79 aa4.66□□□□□ -1.66
TTC28-207ENST00000490475 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
TTC28-207ENST00000490475 K7ERS5 55 aa4.65□□□□□ -1.67
TTC28-207ENST00000490475 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
TTC28-207ENST00000490475 MT1BP07438 61 aa4.63□□□□□ -1.67
TTC28-207ENST00000490475 H0YAA0 97 aa4.62□□□□□ -1.67
TTC28-207ENST00000490475 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
TTC28-207ENST00000490475 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
TTC28-207ENST00000490475 NEBP20929 6669 aa4.53□□□□□ -1.68
TTC28-207ENST00000490475 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
TTC28-207ENST00000490475 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
TTC28-207ENST00000490475 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
TTC28-207ENST00000490475 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
TTC28-207ENST00000490475 P0C880 135 aa4.48□□□□□ -1.69
TTC28-207ENST00000490475 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
TTC28-207ENST00000490475 KMT2DO14686 5537 aa4.42□□□□□ -1.7
TTC28-207ENST00000490475 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
TTC28-207ENST00000490475 R4GN34 69 aa4.41□□□□□ -1.7
TTC28-207ENST00000490475 M0QZ58 72 aa4.39□□□□□ -1.71
TTC28-207ENST00000490475 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
TTC28-207ENST00000490475 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
TTC28-207ENST00000490475 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
TTC28-207ENST00000490475 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
TTC28-207ENST00000490475 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
TTC28-207ENST00000490475 SPRR2EP22531 72 aa4.32□□□□□ -1.72
TTC28-207ENST00000490475 SPRR2BP35325 72 aa4.32□□□□□ -1.72
TTC28-207ENST00000490475 SPRR2AP35326 72 aa4.32□□□□□ -1.72
TTC28-207ENST00000490475 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
TTC28-207ENST00000490475 MT1XP80297 61 aa4.32□□□□□ -1.72
TTC28-207ENST00000490475 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
TTC28-207ENST00000490475 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
TTC28-207ENST00000490475 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
TTC28-207ENST00000490475 A0A0D9SG42 100 aa4.27□□□□□ -1.73
TTC28-207ENST00000490475 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
TTC28-207ENST00000490475 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
TTC28-207ENST00000490475 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
TTC28-207ENST00000490475 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
TTC28-207ENST00000490475 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms