RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
CLIC4-203ENST00000489758 S4R3F8 94 aa7.75□□□□□ -1.17
CLIC4-203ENST00000489758 LCA10Q71F78 164 aa7.73□□□□□ -1.17
CLIC4-203ENST00000489758 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
CLIC4-203ENST00000489758 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
CLIC4-203ENST00000489758 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
CLIC4-203ENST00000489758 MT2AP02795 61 aa7.65□□□□□ -1.18
CLIC4-203ENST00000489758 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
CLIC4-203ENST00000489758 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
CLIC4-203ENST00000489758 CCDC179H3BU77 68 aa7.61□□□□□ -1.19
CLIC4-203ENST00000489758 H7BZZ5 65 aa7.6□□□□□ -1.19
CLIC4-203ENST00000489758 NDUFC1O43677 76 aa7.6□□□□□ -1.19
CLIC4-203ENST00000489758 MT1FP04733 61 aa7.6□□□□□ -1.19
CLIC4-203ENST00000489758 ACYP2P14621 99 aa7.58□□□□□ -1.2
CLIC4-203ENST00000489758 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
CLIC4-203ENST00000489758 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
CLIC4-203ENST00000489758 H0YAA0 97 aa7.43□□□□□ -1.22
CLIC4-203ENST00000489758 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
CLIC4-203ENST00000489758 COA5Q86WW8 74 aa7.41□□□□□ -1.22
CLIC4-203ENST00000489758 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
CLIC4-203ENST00000489758 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
CLIC4-203ENST00000489758 LCE2BO14633 110 aa7.33□□□□□ -1.24
CLIC4-203ENST00000489758 ATP5EP56381 51 aaPredicted RBP7.33□□□□□ -1.24
CLIC4-203ENST00000489758 TMEM258P61165 79 aa7.32□□□□□ -1.24
CLIC4-203ENST00000489758 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
CLIC4-203ENST00000489758 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
CLIC4-203ENST00000489758 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
CLIC4-203ENST00000489758 P0C880 135 aa7.28□□□□□ -1.24
CLIC4-203ENST00000489758 SPRR2GQ9BYE4 73 aa7.26□□□□□ -1.25
CLIC4-203ENST00000489758 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
CLIC4-203ENST00000489758 PCP4P48539 62 aa7.25□□□□□ -1.25
CLIC4-203ENST00000489758 USH2AO75445 5202 aa7.25□□□□□ -1.25
CLIC4-203ENST00000489758 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
CLIC4-203ENST00000489758 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.26
CLIC4-203ENST00000489758 MT1BP07438 61 aa7.1□□□□□ -1.27
CLIC4-203ENST00000489758 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
CLIC4-203ENST00000489758 R4GN34 69 aa7.1□□□□□ -1.27
CLIC4-203ENST00000489758 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
CLIC4-203ENST00000489758 M0QZ58 72 aa7.08□□□□□ -1.28
CLIC4-203ENST00000489758 Q5VV11 94 aa7.06□□□□□ -1.28
CLIC4-203ENST00000489758 SEC61GP60059 68 aa7.05□□□□□ -1.28
CLIC4-203ENST00000489758 A0A1B0GU69 56 aa6.99□□□□□ -1.29
CLIC4-203ENST00000489758 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
CLIC4-203ENST00000489758 KRTAP19-6Q3LI70 58 aa6.98□□□□□ -1.29
CLIC4-203ENST00000489758 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
CLIC4-203ENST00000489758 A0A1B0GU33 70 aa6.94□□□□□ -1.3
CLIC4-203ENST00000489758 LINC01554Q52M75 96 aa6.94□□□□□ -1.3
CLIC4-203ENST00000489758 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.3
CLIC4-203ENST00000489758 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
CLIC4-203ENST00000489758 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
CLIC4-203ENST00000489758 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
CLIC4-203ENST00000489758 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
CLIC4-203ENST00000489758 A6NN06 94 aa6.85□□□□□ -1.31
CLIC4-203ENST00000489758 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
CLIC4-203ENST00000489758 SMIM26A0A096LP01 95 aa6.84□□□□□ -1.31
CLIC4-203ENST00000489758 Q1T7F1 81 aa6.83□□□□□ -1.32
CLIC4-203ENST00000489758 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
CLIC4-203ENST00000489758 V9GYY9 64 aa6.81□□□□□ -1.32
CLIC4-203ENST00000489758 A0A0D9SG42 100 aa6.77□□□□□ -1.33
CLIC4-203ENST00000489758 MT1XP80297 61 aa6.76□□□□□ -1.33
CLIC4-203ENST00000489758 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
CLIC4-203ENST00000489758 PSPHP1O15172 72 aa6.73□□□□□ -1.33
CLIC4-203ENST00000489758 A8MU10 97 aa6.71□□□□□ -1.34
CLIC4-203ENST00000489758 UQCR11O14957 56 aa6.69□□□□□ -1.34
CLIC4-203ENST00000489758 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
CLIC4-203ENST00000489758 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
CLIC4-203ENST00000489758 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
CLIC4-203ENST00000489758 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
CLIC4-203ENST00000489758 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
CLIC4-203ENST00000489758 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
CLIC4-203ENST00000489758 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
CLIC4-203ENST00000489758 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
CLIC4-203ENST00000489758 A6NED7 52 aa6.5□□□□□ -1.37
CLIC4-203ENST00000489758 NEBP20929 6669 aa6.46□□□□□ -1.37
CLIC4-203ENST00000489758 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
CLIC4-203ENST00000489758 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
CLIC4-203ENST00000489758 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
CLIC4-203ENST00000489758 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
CLIC4-203ENST00000489758 C10orf95Q9H7T3 257 aa6.36□□□□□ -1.39
CLIC4-203ENST00000489758 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
CLIC4-203ENST00000489758 K7ERS5 55 aa6.33□□□□□ -1.4
CLIC4-203ENST00000489758 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
CLIC4-203ENST00000489758 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
CLIC4-203ENST00000489758 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
CLIC4-203ENST00000489758 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
CLIC4-203ENST00000489758 KMT2DO14686 5537 aa6.23□□□□□ -1.41
CLIC4-203ENST00000489758 TNP1P09430 55 aa6.2□□□□□ -1.42
CLIC4-203ENST00000489758 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
CLIC4-203ENST00000489758 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
CLIC4-203ENST00000489758 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.42
CLIC4-203ENST00000489758 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.42
CLIC4-203ENST00000489758 SPRR2EP22531 72 aa6.11□□□□□ -1.43
CLIC4-203ENST00000489758 SPRR2BP35325 72 aa6.11□□□□□ -1.43
CLIC4-203ENST00000489758 SPRR2AP35326 72 aa6.11□□□□□ -1.43
CLIC4-203ENST00000489758 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
CLIC4-203ENST00000489758 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
CLIC4-203ENST00000489758 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
CLIC4-203ENST00000489758 ROMO1P60602 79 aa6.04□□□□□ -1.44
CLIC4-203ENST00000489758 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
CLIC4-203ENST00000489758 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms