RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 MT1HP80294 61 aa6.2□□□□□ -1.42
GGPS1-207ENST00000489692 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
GGPS1-207ENST00000489692 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
GGPS1-207ENST00000489692 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
GGPS1-207ENST00000489692 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
GGPS1-207ENST00000489692 LCE2DQ5TA82 110 aaPredicted RBP6.15□□□□□ -1.42
GGPS1-207ENST00000489692 Q75L30 129 aa6.15□□□□□ -1.42
GGPS1-207ENST00000489692 A8MUN3 132 aa6.13□□□□□ -1.43
GGPS1-207ENST00000489692 PSPHP1O15172 72 aa6.13□□□□□ -1.43
GGPS1-207ENST00000489692 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
GGPS1-207ENST00000489692 Q5VV11 94 aa6.12□□□□□ -1.43
GGPS1-207ENST00000489692 CHKB-CPT1BH3BT56 60 aa6.11□□□□□ -1.43
GGPS1-207ENST00000489692 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
GGPS1-207ENST00000489692 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
GGPS1-207ENST00000489692 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
GGPS1-207ENST00000489692 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
GGPS1-207ENST00000489692 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
GGPS1-207ENST00000489692 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
GGPS1-207ENST00000489692 SPINK7P58062 85 aa6.02□□□□□ -1.45
GGPS1-207ENST00000489692 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
GGPS1-207ENST00000489692 A6NED7 52 aa5.97□□□□□ -1.45
GGPS1-207ENST00000489692 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.45
GGPS1-207ENST00000489692 A0A1B0GU69 56 aa5.95□□□□□ -1.46
GGPS1-207ENST00000489692 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
GGPS1-207ENST00000489692 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
GGPS1-207ENST00000489692 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
GGPS1-207ENST00000489692 LCA10Q71F78 164 aa5.9□□□□□ -1.46
GGPS1-207ENST00000489692 SEC61GP60059 68 aa5.85□□□□□ -1.47
GGPS1-207ENST00000489692 A8MU10 97 aa5.84□□□□□ -1.47
GGPS1-207ENST00000489692 UQCR11O14957 56 aa5.83□□□□□ -1.48
GGPS1-207ENST00000489692 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
GGPS1-207ENST00000489692 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
GGPS1-207ENST00000489692 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
GGPS1-207ENST00000489692 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
GGPS1-207ENST00000489692 MT2AP02795 61 aa5.77□□□□□ -1.49
GGPS1-207ENST00000489692 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
GGPS1-207ENST00000489692 A6NN06 94 aa5.74□□□□□ -1.49
GGPS1-207ENST00000489692 S4R3F8 94 aa5.74□□□□□ -1.49
GGPS1-207ENST00000489692 MT1FP04733 61 aa5.73□□□□□ -1.49
GGPS1-207ENST00000489692 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
GGPS1-207ENST00000489692 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
GGPS1-207ENST00000489692 USH2AO75445 5202 aa5.69□□□□□ -1.5
GGPS1-207ENST00000489692 A0A1B0GU33 70 aa5.69□□□□□ -1.5
GGPS1-207ENST00000489692 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
GGPS1-207ENST00000489692 H0YAA0 97 aa5.64□□□□□ -1.51
GGPS1-207ENST00000489692 LCE2BO14633 110 aa5.64□□□□□ -1.51
GGPS1-207ENST00000489692 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
GGPS1-207ENST00000489692 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
GGPS1-207ENST00000489692 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
GGPS1-207ENST00000489692 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
GGPS1-207ENST00000489692 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
GGPS1-207ENST00000489692 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
GGPS1-207ENST00000489692 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
GGPS1-207ENST00000489692 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
GGPS1-207ENST00000489692 K7ERS5 55 aa5.49□□□□□ -1.53
GGPS1-207ENST00000489692 P0C880 135 aa5.49□□□□□ -1.53
GGPS1-207ENST00000489692 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
GGPS1-207ENST00000489692 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
GGPS1-207ENST00000489692 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
GGPS1-207ENST00000489692 M0QZ58 72 aa5.44□□□□□ -1.54
GGPS1-207ENST00000489692 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
GGPS1-207ENST00000489692 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
GGPS1-207ENST00000489692 A0A0D9SG42 100 aa5.36□□□□□ -1.55
GGPS1-207ENST00000489692 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
GGPS1-207ENST00000489692 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
GGPS1-207ENST00000489692 ROMO1P60602 79 aa5.3□□□□□ -1.56
GGPS1-207ENST00000489692 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
GGPS1-207ENST00000489692 R4GN34 69 aa5.27□□□□□ -1.57
GGPS1-207ENST00000489692 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
GGPS1-207ENST00000489692 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
GGPS1-207ENST00000489692 MT1BP07438 61 aa5.22□□□□□ -1.57
GGPS1-207ENST00000489692 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
GGPS1-207ENST00000489692 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
GGPS1-207ENST00000489692 CRIPTQ9P021 101 aa5.21□□□□□ -1.58
GGPS1-207ENST00000489692 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
GGPS1-207ENST00000489692 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
GGPS1-207ENST00000489692 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
GGPS1-207ENST00000489692 NEBP20929 6669 aa5.08□□□□□ -1.6
GGPS1-207ENST00000489692 PLAC4Q8WY50 150 aa5□□□□□ -1.61
GGPS1-207ENST00000489692 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
GGPS1-207ENST00000489692 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
GGPS1-207ENST00000489692 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
GGPS1-207ENST00000489692 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
GGPS1-207ENST00000489692 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
GGPS1-207ENST00000489692 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
GGPS1-207ENST00000489692 KMT2DO14686 5537 aa4.9□□□□□ -1.62
GGPS1-207ENST00000489692 MDN1Q9NU22 5596 aa4.9□□□□□ -1.63
GGPS1-207ENST00000489692 MT1XP80297 61 aa4.89□□□□□ -1.63
GGPS1-207ENST00000489692 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
GGPS1-207ENST00000489692 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
GGPS1-207ENST00000489692 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
GGPS1-207ENST00000489692 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
GGPS1-207ENST00000489692 TNP1P09430 55 aa4.81□□□□□ -1.64
GGPS1-207ENST00000489692 SPRR2EP22531 72 aa4.81□□□□□ -1.64
GGPS1-207ENST00000489692 SPRR2BP35325 72 aa4.81□□□□□ -1.64
GGPS1-207ENST00000489692 SPRR2AP35326 72 aa4.81□□□□□ -1.64
GGPS1-207ENST00000489692 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
GGPS1-207ENST00000489692 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
GGPS1-207ENST00000489692 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
GGPS1-207ENST00000489692 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms