RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 SPANXA2-OT1Q8N9U9 137 aa5.43□□□□□ -1.54
TFF3-203ENST00000489676 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
TFF3-203ENST00000489676 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
TFF3-203ENST00000489676 CYSTM1Q9H1C7 97 aa5.38□□□□□ -1.55
TFF3-203ENST00000489676 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
TFF3-203ENST00000489676 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
TFF3-203ENST00000489676 A8MUN3 132 aa5.3□□□□□ -1.56
TFF3-203ENST00000489676 DMAC1Q96GE9 116 aa5.29□□□□□ -1.56
TFF3-203ENST00000489676 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
TFF3-203ENST00000489676 M0R2T5 61 aa5.27□□□□□ -1.57
TFF3-203ENST00000489676 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
TFF3-203ENST00000489676 V9GYY9 64 aa5.27□□□□□ -1.57
TFF3-203ENST00000489676 S4R3F8 94 aa5.26□□□□□ -1.57
TFF3-203ENST00000489676 ACYP2P14621 99 aa5.25□□□□□ -1.57
TFF3-203ENST00000489676 LCA10Q71F78 164 aa5.25□□□□□ -1.57
TFF3-203ENST00000489676 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
TFF3-203ENST00000489676 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
TFF3-203ENST00000489676 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
TFF3-203ENST00000489676 MT2AP02795 61 aa5.16□□□□□ -1.58
TFF3-203ENST00000489676 Q1T7F1 81 aa5.16□□□□□ -1.58
TFF3-203ENST00000489676 COA5Q86WW8 74 aa5.16□□□□□ -1.58
TFF3-203ENST00000489676 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
TFF3-203ENST00000489676 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
TFF3-203ENST00000489676 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
TFF3-203ENST00000489676 SPTSSBQ8NFR3 76 aa5.14□□□□□ -1.59
TFF3-203ENST00000489676 MT1FP04733 61 aa5.13□□□□□ -1.59
TFF3-203ENST00000489676 PRR15LQ9BU68 103 aa5.07□□□□□ -1.6
TFF3-203ENST00000489676 H0YAA0 97 aa5.06□□□□□ -1.6
TFF3-203ENST00000489676 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
TFF3-203ENST00000489676 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
TFF3-203ENST00000489676 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
TFF3-203ENST00000489676 SEC61GP60059 68 aa5□□□□□ -1.61
TFF3-203ENST00000489676 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
TFF3-203ENST00000489676 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
TFF3-203ENST00000489676 A0A1B0GU69 56 aa4.95□□□□□ -1.62
TFF3-203ENST00000489676 PSPHP1O15172 72 aa4.95□□□□□ -1.62
TFF3-203ENST00000489676 P0C880 135 aa4.95□□□□□ -1.62
TFF3-203ENST00000489676 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
TFF3-203ENST00000489676 LCE2BO14633 110 aa4.94□□□□□ -1.62
TFF3-203ENST00000489676 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
TFF3-203ENST00000489676 Q5VV11 94 aa4.92□□□□□ -1.62
TFF3-203ENST00000489676 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
TFF3-203ENST00000489676 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
TFF3-203ENST00000489676 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
TFF3-203ENST00000489676 USH2AO75445 5202 aa4.9□□□□□ -1.62
TFF3-203ENST00000489676 A6NED7 52 aa4.9□□□□□ -1.63
TFF3-203ENST00000489676 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
TFF3-203ENST00000489676 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
TFF3-203ENST00000489676 UQCR11O14957 56 aa4.87□□□□□ -1.63
TFF3-203ENST00000489676 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
TFF3-203ENST00000489676 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
TFF3-203ENST00000489676 CDC42SE1Q9NRR8 79 aa4.84□□□□□ -1.63
TFF3-203ENST00000489676 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
TFF3-203ENST00000489676 M0QZ58 72 aa4.81□□□□□ -1.64
TFF3-203ENST00000489676 MT1BP07438 61 aa4.81□□□□□ -1.64
TFF3-203ENST00000489676 R4GN34 69 aa4.81□□□□□ -1.64
TFF3-203ENST00000489676 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
TFF3-203ENST00000489676 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
TFF3-203ENST00000489676 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
TFF3-203ENST00000489676 A0A1B0GU33 70 aa4.76□□□□□ -1.65
TFF3-203ENST00000489676 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
TFF3-203ENST00000489676 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
TFF3-203ENST00000489676 K7ERS5 55 aa4.69□□□□□ -1.66
TFF3-203ENST00000489676 LINC01554Q52M75 96 aa4.69□□□□□ -1.66
TFF3-203ENST00000489676 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
TFF3-203ENST00000489676 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
TFF3-203ENST00000489676 A6NN06 94 aa4.67□□□□□ -1.66
TFF3-203ENST00000489676 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
TFF3-203ENST00000489676 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
TFF3-203ENST00000489676 A0A0D9SG42 100 aa4.6□□□□□ -1.67
TFF3-203ENST00000489676 MT1XP80297 61 aa4.59□□□□□ -1.67
TFF3-203ENST00000489676 A8MU10 97 aa4.58□□□□□ -1.68
TFF3-203ENST00000489676 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
TFF3-203ENST00000489676 NEBP20929 6669 aa4.57□□□□□ -1.68
TFF3-203ENST00000489676 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
TFF3-203ENST00000489676 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
TFF3-203ENST00000489676 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
TFF3-203ENST00000489676 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
TFF3-203ENST00000489676 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
TFF3-203ENST00000489676 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
TFF3-203ENST00000489676 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
TFF3-203ENST00000489676 ROMO1P60602 79 aa4.38□□□□□ -1.71
TFF3-203ENST00000489676 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
TFF3-203ENST00000489676 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
TFF3-203ENST00000489676 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
TFF3-203ENST00000489676 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
TFF3-203ENST00000489676 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
TFF3-203ENST00000489676 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
TFF3-203ENST00000489676 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TFF3-203ENST00000489676 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
TFF3-203ENST00000489676 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
TFF3-203ENST00000489676 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
TFF3-203ENST00000489676 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
TFF3-203ENST00000489676 TNP1P09430 55 aa4.21□□□□□ -1.74
TFF3-203ENST00000489676 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
TFF3-203ENST00000489676 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
TFF3-203ENST00000489676 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
TFF3-203ENST00000489676 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
TFF3-203ENST00000489676 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
TFF3-203ENST00000489676 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms