RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 A0A1B0GU69 56 aa3.44□□□□□ -1.86
RN7SL561P-201ENST00000488553 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
RN7SL561P-201ENST00000488553 LCA10Q71F78 164 aa3.43□□□□□ -1.86
RN7SL561P-201ENST00000488553 A6NED7 52 aa3.42□□□□□ -1.86
RN7SL561P-201ENST00000488553 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
RN7SL561P-201ENST00000488553 KRTAP3-3Q9BYR6 98 aa3.41□□□□□ -1.86
RN7SL561P-201ENST00000488553 A8MU10 97 aa3.4□□□□□ -1.87
RN7SL561P-201ENST00000488553 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.87
RN7SL561P-201ENST00000488553 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
RN7SL561P-201ENST00000488553 SEC61GP60059 68 aa3.39□□□□□ -1.87
RN7SL561P-201ENST00000488553 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
RN7SL561P-201ENST00000488553 SPATA8Q6RVD6 105 aa3.38□□□□□ -1.87
RN7SL561P-201ENST00000488553 UQCR11O14957 56 aa3.36□□□□□ -1.87
RN7SL561P-201ENST00000488553 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
RN7SL561P-201ENST00000488553 S4R3F8 94 aa3.36□□□□□ -1.87
RN7SL561P-201ENST00000488553 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
RN7SL561P-201ENST00000488553 LPAP08519 4548 aa3.34□□□□□ -1.87
RN7SL561P-201ENST00000488553 MIR22HGQ0VDD5 57 aa3.34□□□□□ -1.87
RN7SL561P-201ENST00000488553 LRP2P98164 4655 aa3.34□□□□□ -1.88
RN7SL561P-201ENST00000488553 A0A1B0GU33 70 aa3.33□□□□□ -1.88
RN7SL561P-201ENST00000488553 MUC2Q02817 5179 aa3.32□□□□□ -1.88
RN7SL561P-201ENST00000488553 KRTAP3-2Q9BYR7 98 aa3.32□□□□□ -1.88
RN7SL561P-201ENST00000488553 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
RN7SL561P-201ENST00000488553 MUC17Q685J3 4493 aa3.3□□□□□ -1.88
RN7SL561P-201ENST00000488553 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
RN7SL561P-201ENST00000488553 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
RN7SL561P-201ENST00000488553 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
RN7SL561P-201ENST00000488553 A6NN06 94 aa3.28□□□□□ -1.88
RN7SL561P-201ENST00000488553 H0YAA0 97 aa3.28□□□□□ -1.88
RN7SL561P-201ENST00000488553 P0C880 135 aa3.25□□□□□ -1.89
RN7SL561P-201ENST00000488553 ADM2Q7Z4H4 148 aa3.25□□□□□ -1.89
RN7SL561P-201ENST00000488553 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
RN7SL561P-201ENST00000488553 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
RN7SL561P-201ENST00000488553 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
RN7SL561P-201ENST00000488553 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
RN7SL561P-201ENST00000488553 M0QZ58 72 aa3.18□□□□□ -1.9
RN7SL561P-201ENST00000488553 LCE2CQ5TA81 110 aa3.17□□□□□ -1.9
RN7SL561P-201ENST00000488553 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
RN7SL561P-201ENST00000488553 A0A0D9SG42 100 aa3.15□□□□□ -1.91
RN7SL561P-201ENST00000488553 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
RN7SL561P-201ENST00000488553 K7ERS5 55 aa3.14□□□□□ -1.91
RN7SL561P-201ENST00000488553 LORP23490 312 aaPredicted RBP3.12□□□□□ -1.91
RN7SL561P-201ENST00000488553 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
RN7SL561P-201ENST00000488553 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
RN7SL561P-201ENST00000488553 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
RN7SL561P-201ENST00000488553 R4GN34 69 aa3.1□□□□□ -1.91
RN7SL561P-201ENST00000488553 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
RN7SL561P-201ENST00000488553 MT1HP80294 61 aa3.07□□□□□ -1.92
RN7SL561P-201ENST00000488553 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
RN7SL561P-201ENST00000488553 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
RN7SL561P-201ENST00000488553 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
RN7SL561P-201ENST00000488553 ROMO1P60602 79 aa3.06□□□□□ -1.92
RN7SL561P-201ENST00000488553 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
RN7SL561P-201ENST00000488553 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
RN7SL561P-201ENST00000488553 M0R2T5 61 aa3.02□□□□□ -1.93
RN7SL561P-201ENST00000488553 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
RN7SL561P-201ENST00000488553 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
RN7SL561P-201ENST00000488553 MT2AP02795 61 aa2.98□□□□□ -1.93
RN7SL561P-201ENST00000488553 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
RN7SL561P-201ENST00000488553 KRTAP19-1Q8IUB9 90 aa2.97□□□□□ -1.93
RN7SL561P-201ENST00000488553 MT1FP04733 61 aa2.96□□□□□ -1.94
RN7SL561P-201ENST00000488553 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
RN7SL561P-201ENST00000488553 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
RN7SL561P-201ENST00000488553 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
RN7SL561P-201ENST00000488553 LCE2AQ5TA79 106 aaPredicted RBP2.91□□□□□ -1.94
RN7SL561P-201ENST00000488553 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
RN7SL561P-201ENST00000488553 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
RN7SL561P-201ENST00000488553 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
RN7SL561P-201ENST00000488553 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
RN7SL561P-201ENST00000488553 LCE2BO14633 110 aa2.87□□□□□ -1.95
RN7SL561P-201ENST00000488553 MT1BP07438 61 aa2.84□□□□□ -1.95
RN7SL561P-201ENST00000488553 TNP1P09430 55 aa2.8□□□□□ -1.96
RN7SL561P-201ENST00000488553 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
RN7SL561P-201ENST00000488553 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
RN7SL561P-201ENST00000488553 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
RN7SL561P-201ENST00000488553 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
RN7SL561P-201ENST00000488553 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
RN7SL561P-201ENST00000488553 NEBP20929 6669 aa2.76□□□□□ -1.97
RN7SL561P-201ENST00000488553 MT1XP80297 61 aa2.76□□□□□ -1.97
RN7SL561P-201ENST00000488553 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
RN7SL561P-201ENST00000488553 KRTAP15-1Q3LI76 137 aa2.69□□□□□ -1.98
RN7SL561P-201ENST00000488553 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
RN7SL561P-201ENST00000488553 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
RN7SL561P-201ENST00000488553 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
RN7SL561P-201ENST00000488553 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
RN7SL561P-201ENST00000488553 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
RN7SL561P-201ENST00000488553 USH2AO75445 5202 aa2.65□□□□□ -1.99
RN7SL561P-201ENST00000488553 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
RN7SL561P-201ENST00000488553 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
RN7SL561P-201ENST00000488553 LOC100996750A0A140TA64 210 aa2.6□□□□□ -1.99
RN7SL561P-201ENST00000488553 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
RN7SL561P-201ENST00000488553 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
RN7SL561P-201ENST00000488553 KRTAP12-3P60328 96 aa2.57□□□□□ -2
RN7SL561P-201ENST00000488553 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
RN7SL561P-201ENST00000488553 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
RN7SL561P-201ENST00000488553 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
RN7SL561P-201ENST00000488553 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
RN7SL561P-201ENST00000488553 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
RN7SL561P-201ENST00000488553 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
RN7SL561P-201ENST00000488553 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 609.9 ms