RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 KRTAP3-1Q9BYR8 98 aa3.15□□□□□ -1.91
VAMP3-203ENST00000487194 SPTSSBQ8NFR3 76 aa3.14□□□□□ -1.91
VAMP3-203ENST00000487194 MPLKIPQ8TAP9 179 aa3.14□□□□□ -1.91
VAMP3-203ENST00000487194 V9GYY9 64 aa3.14□□□□□ -1.91
VAMP3-203ENST00000487194 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
VAMP3-203ENST00000487194 Q1T7F1 81 aa3.12□□□□□ -1.91
VAMP3-203ENST00000487194 H1FX-AS1Q4G0G2 97 aa3.12□□□□□ -1.91
VAMP3-203ENST00000487194 FSIP2Q5CZC0 6907 aa3.1□□□□□ -1.91
VAMP3-203ENST00000487194 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
VAMP3-203ENST00000487194 LINC01558Q9Y6Z2 57 aa3.09□□□□□ -1.91
VAMP3-203ENST00000487194 S4R3F8 94 aa3.09□□□□□ -1.91
VAMP3-203ENST00000487194 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
VAMP3-203ENST00000487194 SEC61GP60059 68 aa3.06□□□□□ -1.92
VAMP3-203ENST00000487194 LCA10Q71F78 164 aa3.06□□□□□ -1.92
VAMP3-203ENST00000487194 A0A1B0GU69 56 aa3.05□□□□□ -1.92
VAMP3-203ENST00000487194 PSPHP1O15172 72 aa3.04□□□□□ -1.92
VAMP3-203ENST00000487194 CSAG1Q6PB30 78 aa3.04□□□□□ -1.92
VAMP3-203ENST00000487194 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
VAMP3-203ENST00000487194 KRTAP3-3Q9BYR6 98 aa3.03□□□□□ -1.92
VAMP3-203ENST00000487194 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
VAMP3-203ENST00000487194 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
VAMP3-203ENST00000487194 Q5VV11 94 aa3.01□□□□□ -1.93
VAMP3-203ENST00000487194 A6NED7 52 aa2.97□□□□□ -1.93
VAMP3-203ENST00000487194 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
VAMP3-203ENST00000487194 H0YAA0 97 aa2.97□□□□□ -1.93
VAMP3-203ENST00000487194 UQCR11O14957 56 aa2.96□□□□□ -1.94
VAMP3-203ENST00000487194 LCE2AQ5TA79 106 aaPredicted RBP2.96□□□□□ -1.94
VAMP3-203ENST00000487194 A0A1B0GU33 70 aa2.95□□□□□ -1.94
VAMP3-203ENST00000487194 LCE2CQ5TA81 110 aa2.95□□□□□ -1.94
VAMP3-203ENST00000487194 ADM2Q7Z4H4 148 aa2.94□□□□□ -1.94
VAMP3-203ENST00000487194 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
VAMP3-203ENST00000487194 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
VAMP3-203ENST00000487194 KRTAP3-2Q9BYR7 98 aa2.93□□□□□ -1.94
VAMP3-203ENST00000487194 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
VAMP3-203ENST00000487194 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
VAMP3-203ENST00000487194 M0R2T5 61 aa2.91□□□□□ -1.94
VAMP3-203ENST00000487194 SPATA8Q6RVD6 105 aa2.91□□□□□ -1.94
VAMP3-203ENST00000487194 P0C880 135 aa2.9□□□□□ -1.95
VAMP3-203ENST00000487194 MT1HP80294 61 aa2.9□□□□□ -1.95
VAMP3-203ENST00000487194 M0QZ58 72 aa2.89□□□□□ -1.95
VAMP3-203ENST00000487194 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
VAMP3-203ENST00000487194 CRIPTQ9P021 101 aa2.86□□□□□ -1.95
VAMP3-203ENST00000487194 R4GN34 69 aa2.86□□□□□ -1.95
VAMP3-203ENST00000487194 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
VAMP3-203ENST00000487194 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.95
VAMP3-203ENST00000487194 A8MU10 97 aa2.83□□□□□ -1.96
VAMP3-203ENST00000487194 K7ERS5 55 aa2.83□□□□□ -1.96
VAMP3-203ENST00000487194 A0A0D9SG42 100 aa2.8□□□□□ -1.96
VAMP3-203ENST00000487194 LORP23490 312 aaPredicted RBP2.8□□□□□ -1.96
VAMP3-203ENST00000487194 MT2AP02795 61 aa2.79□□□□□ -1.96
VAMP3-203ENST00000487194 KRTAP9-8Q9BYQ0 159 aa2.79□□□□□ -1.96
VAMP3-203ENST00000487194 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
VAMP3-203ENST00000487194 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
VAMP3-203ENST00000487194 LINC01554Q52M75 96 aa2.78□□□□□ -1.96
VAMP3-203ENST00000487194 A6NN06 94 aa2.77□□□□□ -1.97
VAMP3-203ENST00000487194 MT1FP04733 61 aa2.76□□□□□ -1.97
VAMP3-203ENST00000487194 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
VAMP3-203ENST00000487194 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
VAMP3-203ENST00000487194 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
VAMP3-203ENST00000487194 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
VAMP3-203ENST00000487194 KRTAP19-1Q8IUB9 90 aa2.72□□□□□ -1.97
VAMP3-203ENST00000487194 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
VAMP3-203ENST00000487194 PLAC4Q8WY50 150 aa2.7□□□□□ -1.98
VAMP3-203ENST00000487194 NEBP20929 6669 aa2.69□□□□□ -1.98
VAMP3-203ENST00000487194 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
VAMP3-203ENST00000487194 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
VAMP3-203ENST00000487194 ROMO1P60602 79 aa2.68□□□□□ -1.98
VAMP3-203ENST00000487194 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
VAMP3-203ENST00000487194 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
VAMP3-203ENST00000487194 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
VAMP3-203ENST00000487194 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
VAMP3-203ENST00000487194 USH2AO75445 5202 aa2.64□□□□□ -1.99
VAMP3-203ENST00000487194 SVIPQ8NHG7 77 aa2.63□□□□□ -1.99
VAMP3-203ENST00000487194 MT1BP07438 61 aa2.62□□□□□ -1.99
VAMP3-203ENST00000487194 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
VAMP3-203ENST00000487194 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
VAMP3-203ENST00000487194 LCE2BO14633 110 aa2.6□□□□□ -1.99
VAMP3-203ENST00000487194 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
VAMP3-203ENST00000487194 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
VAMP3-203ENST00000487194 KRTAP25-1Q3LHN0 102 aa2.57□□□□□ -2
VAMP3-203ENST00000487194 PRAC1Q96KF2 57 aa2.57□□□□□ -2
VAMP3-203ENST00000487194 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
VAMP3-203ENST00000487194 TNP1P09430 55 aa2.56□□□□□ -2
VAMP3-203ENST00000487194 KRTAP10-5P60370 271 aa2.54□□□□□ -2
VAMP3-203ENST00000487194 MT1XP80297 61 aa2.54□□□□□ -2
VAMP3-203ENST00000487194 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
VAMP3-203ENST00000487194 KRTAP23-1A1A580 65 aa2.5□□□□□ -2.01
VAMP3-203ENST00000487194 KMT2DO14686 5537 aa2.49□□□□□ -2.01
VAMP3-203ENST00000487194 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
VAMP3-203ENST00000487194 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
VAMP3-203ENST00000487194 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
VAMP3-203ENST00000487194 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
VAMP3-203ENST00000487194 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
VAMP3-203ENST00000487194 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
VAMP3-203ENST00000487194 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
VAMP3-203ENST00000487194 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
VAMP3-203ENST00000487194 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
VAMP3-203ENST00000487194 KRTAP2-2Q9BYT5 123 aa2.37□□□□□ -2.03
VAMP3-203ENST00000487194 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
VAMP3-203ENST00000487194 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms