RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 COX6B2Q6YFQ2 88 aa4.41□□□□□ -1.7
NUDCD3-209ENST00000487118 COA5Q86WW8 74 aa4.41□□□□□ -1.7
NUDCD3-209ENST00000487118 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
NUDCD3-209ENST00000487118 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
NUDCD3-209ENST00000487118 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
NUDCD3-209ENST00000487118 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
NUDCD3-209ENST00000487118 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
NUDCD3-209ENST00000487118 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
NUDCD3-209ENST00000487118 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
NUDCD3-209ENST00000487118 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
NUDCD3-209ENST00000487118 Q1T7F1 81 aa4.27□□□□□ -1.73
NUDCD3-209ENST00000487118 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
NUDCD3-209ENST00000487118 S4R3F8 94 aa4.26□□□□□ -1.73
NUDCD3-209ENST00000487118 LCA10Q71F78 164 aa4.25□□□□□ -1.73
NUDCD3-209ENST00000487118 KRTAP3-3Q9BYR6 98 aa4.25□□□□□ -1.73
NUDCD3-209ENST00000487118 V9GYY9 64 aa4.25□□□□□ -1.73
NUDCD3-209ENST00000487118 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
NUDCD3-209ENST00000487118 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
NUDCD3-209ENST00000487118 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
NUDCD3-209ENST00000487118 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
NUDCD3-209ENST00000487118 A0A1B0GU69 56 aa4.15□□□□□ -1.75
NUDCD3-209ENST00000487118 PSPHP1O15172 72 aa4.15□□□□□ -1.75
NUDCD3-209ENST00000487118 Q5VV11 94 aa4.15□□□□□ -1.75
NUDCD3-209ENST00000487118 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.75
NUDCD3-209ENST00000487118 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
NUDCD3-209ENST00000487118 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
NUDCD3-209ENST00000487118 SEC61GP60059 68 aa4.12□□□□□ -1.75
NUDCD3-209ENST00000487118 H0YAA0 97 aa4.11□□□□□ -1.75
NUDCD3-209ENST00000487118 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
NUDCD3-209ENST00000487118 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
NUDCD3-209ENST00000487118 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
NUDCD3-209ENST00000487118 MT1HP80294 61 aa4.08□□□□□ -1.76
NUDCD3-209ENST00000487118 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
NUDCD3-209ENST00000487118 A6NED7 52 aa4.04□□□□□ -1.76
NUDCD3-209ENST00000487118 P0C880 135 aa4.04□□□□□ -1.76
NUDCD3-209ENST00000487118 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
NUDCD3-209ENST00000487118 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
NUDCD3-209ENST00000487118 A0A1B0GU33 70 aa4.03□□□□□ -1.76
NUDCD3-209ENST00000487118 UQCR11O14957 56 aa4.03□□□□□ -1.76
NUDCD3-209ENST00000487118 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
NUDCD3-209ENST00000487118 USH2AO75445 5202 aa4□□□□□ -1.77
NUDCD3-209ENST00000487118 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
NUDCD3-209ENST00000487118 M0R2T5 61 aa3.99□□□□□ -1.77
NUDCD3-209ENST00000487118 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
NUDCD3-209ENST00000487118 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
NUDCD3-209ENST00000487118 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
NUDCD3-209ENST00000487118 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
NUDCD3-209ENST00000487118 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
NUDCD3-209ENST00000487118 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
NUDCD3-209ENST00000487118 A8MU10 97 aa3.95□□□□□ -1.78
NUDCD3-209ENST00000487118 M0QZ58 72 aa3.95□□□□□ -1.78
NUDCD3-209ENST00000487118 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
NUDCD3-209ENST00000487118 NEBP20929 6669 aa3.93□□□□□ -1.78
NUDCD3-209ENST00000487118 MT2AP02795 61 aa3.93□□□□□ -1.78
NUDCD3-209ENST00000487118 CRIPTQ9P021 101 aa3.92□□□□□ -1.78
NUDCD3-209ENST00000487118 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
NUDCD3-209ENST00000487118 R4GN34 69 aa3.9□□□□□ -1.79
NUDCD3-209ENST00000487118 MT1FP04733 61 aa3.89□□□□□ -1.79
NUDCD3-209ENST00000487118 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
NUDCD3-209ENST00000487118 A0A0D9SG42 100 aa3.85□□□□□ -1.79
NUDCD3-209ENST00000487118 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
NUDCD3-209ENST00000487118 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
NUDCD3-209ENST00000487118 A6NN06 94 aa3.81□□□□□ -1.8
NUDCD3-209ENST00000487118 LINC01554Q52M75 96 aa3.81□□□□□ -1.8
NUDCD3-209ENST00000487118 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
NUDCD3-209ENST00000487118 K7ERS5 55 aa3.79□□□□□ -1.8
NUDCD3-209ENST00000487118 LCE2BO14633 110 aa3.79□□□□□ -1.8
NUDCD3-209ENST00000487118 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
NUDCD3-209ENST00000487118 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
NUDCD3-209ENST00000487118 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
NUDCD3-209ENST00000487118 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
NUDCD3-209ENST00000487118 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
NUDCD3-209ENST00000487118 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
NUDCD3-209ENST00000487118 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
NUDCD3-209ENST00000487118 KMT2DO14686 5537 aa3.72□□□□□ -1.81
NUDCD3-209ENST00000487118 MT1BP07438 61 aa3.7□□□□□ -1.82
NUDCD3-209ENST00000487118 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
NUDCD3-209ENST00000487118 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
NUDCD3-209ENST00000487118 ROMO1P60602 79 aa3.65□□□□□ -1.83
NUDCD3-209ENST00000487118 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
NUDCD3-209ENST00000487118 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
NUDCD3-209ENST00000487118 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
NUDCD3-209ENST00000487118 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
NUDCD3-209ENST00000487118 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
NUDCD3-209ENST00000487118 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
NUDCD3-209ENST00000487118 MT1XP80297 61 aa3.57□□□□□ -1.84
NUDCD3-209ENST00000487118 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
NUDCD3-209ENST00000487118 SVIPQ8NHG7 77 aa3.55□□□□□ -1.84
NUDCD3-209ENST00000487118 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
NUDCD3-209ENST00000487118 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
NUDCD3-209ENST00000487118 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
NUDCD3-209ENST00000487118 TNP1P09430 55 aa3.5□□□□□ -1.85
NUDCD3-209ENST00000487118 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
NUDCD3-209ENST00000487118 SPRR2EP22531 72 aa3.44□□□□□ -1.86
NUDCD3-209ENST00000487118 SPRR2BP35325 72 aa3.44□□□□□ -1.86
NUDCD3-209ENST00000487118 SPRR2AP35326 72 aa3.44□□□□□ -1.86
NUDCD3-209ENST00000487118 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
NUDCD3-209ENST00000487118 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
NUDCD3-209ENST00000487118 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
NUDCD3-209ENST00000487118 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms