RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
NR1H3-223ENST00000486991 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
NR1H3-223ENST00000486991 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
NR1H3-223ENST00000486991 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
NR1H3-223ENST00000486991 MT2AP02795 61 aa6.43□□□□□ -1.38
NR1H3-223ENST00000486991 LCE2BO14633 110 aa6.41□□□□□ -1.38
NR1H3-223ENST00000486991 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
NR1H3-223ENST00000486991 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
NR1H3-223ENST00000486991 MT1FP04733 61 aa6.39□□□□□ -1.39
NR1H3-223ENST00000486991 A8MUN3 132 aa6.36□□□□□ -1.39
NR1H3-223ENST00000486991 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
NR1H3-223ENST00000486991 NDUFC1O43677 76 aa6.34□□□□□ -1.39
NR1H3-223ENST00000486991 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
NR1H3-223ENST00000486991 S4R3F8 94 aa6.34□□□□□ -1.39
NR1H3-223ENST00000486991 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
NR1H3-223ENST00000486991 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
NR1H3-223ENST00000486991 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
NR1H3-223ENST00000486991 H7BZZ5 65 aa6.31□□□□□ -1.4
NR1H3-223ENST00000486991 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
NR1H3-223ENST00000486991 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
NR1H3-223ENST00000486991 LCA10Q71F78 164 aa6.29□□□□□ -1.4
NR1H3-223ENST00000486991 ACYP2P14621 99 aa6.27□□□□□ -1.41
NR1H3-223ENST00000486991 CSAG1Q6PB30 78 aa6.22□□□□□ -1.41
NR1H3-223ENST00000486991 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
NR1H3-223ENST00000486991 PCP4P48539 62 aa6.2□□□□□ -1.42
NR1H3-223ENST00000486991 CHKB-CPT1BH3BT56 60 aa6.19□□□□□ -1.42
NR1H3-223ENST00000486991 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
NR1H3-223ENST00000486991 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
NR1H3-223ENST00000486991 TMEM258P61165 79 aa6.15□□□□□ -1.42
NR1H3-223ENST00000486991 COA5Q86WW8 74 aa6.15□□□□□ -1.42
NR1H3-223ENST00000486991 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
NR1H3-223ENST00000486991 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
NR1H3-223ENST00000486991 H0YAA0 97 aa6.02□□□□□ -1.45
NR1H3-223ENST00000486991 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
NR1H3-223ENST00000486991 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
NR1H3-223ENST00000486991 NEBP20929 6669 aa5.94□□□□□ -1.46
NR1H3-223ENST00000486991 P0C880 135 aa5.93□□□□□ -1.46
NR1H3-223ENST00000486991 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
NR1H3-223ENST00000486991 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
NR1H3-223ENST00000486991 SEC61GP60059 68 aa5.89□□□□□ -1.47
NR1H3-223ENST00000486991 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
NR1H3-223ENST00000486991 A0A1B0GU69 56 aa5.83□□□□□ -1.48
NR1H3-223ENST00000486991 R4GN34 69 aa5.83□□□□□ -1.48
NR1H3-223ENST00000486991 MT1BP07438 61 aa5.82□□□□□ -1.48
NR1H3-223ENST00000486991 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
NR1H3-223ENST00000486991 M0QZ58 72 aa5.81□□□□□ -1.48
NR1H3-223ENST00000486991 Q5VV11 94 aa5.81□□□□□ -1.48
NR1H3-223ENST00000486991 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
NR1H3-223ENST00000486991 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
NR1H3-223ENST00000486991 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
NR1H3-223ENST00000486991 A6NN06 94 aa5.78□□□□□ -1.48
NR1H3-223ENST00000486991 PRR15LQ9BU68 103 aa5.78□□□□□ -1.48
NR1H3-223ENST00000486991 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
NR1H3-223ENST00000486991 A0A1B0GU33 70 aa5.74□□□□□ -1.49
NR1H3-223ENST00000486991 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
NR1H3-223ENST00000486991 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
NR1H3-223ENST00000486991 LINC01554Q52M75 96 aa5.73□□□□□ -1.49
NR1H3-223ENST00000486991 V9GYY9 64 aa5.73□□□□□ -1.49
NR1H3-223ENST00000486991 Q1T7F1 81 aa5.71□□□□□ -1.5
NR1H3-223ENST00000486991 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
NR1H3-223ENST00000486991 KMT2DO14686 5537 aa5.69□□□□□ -1.5
NR1H3-223ENST00000486991 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
NR1H3-223ENST00000486991 SPATA8Q6RVD6 105 aa5.67□□□□□ -1.5
NR1H3-223ENST00000486991 PSPHP1O15172 72 aa5.66□□□□□ -1.5
NR1H3-223ENST00000486991 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
NR1H3-223ENST00000486991 A0A0D9SG42 100 aa5.62□□□□□ -1.51
NR1H3-223ENST00000486991 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
NR1H3-223ENST00000486991 UQCR11O14957 56 aa5.59□□□□□ -1.51
NR1H3-223ENST00000486991 A8MU10 97 aa5.55□□□□□ -1.52
NR1H3-223ENST00000486991 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
NR1H3-223ENST00000486991 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
NR1H3-223ENST00000486991 A6NED7 52 aa5.5□□□□□ -1.53
NR1H3-223ENST00000486991 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
NR1H3-223ENST00000486991 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
NR1H3-223ENST00000486991 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
NR1H3-223ENST00000486991 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
NR1H3-223ENST00000486991 MT1XP80297 61 aa5.46□□□□□ -1.54
NR1H3-223ENST00000486991 SPRR2EP22531 72 aa5.44□□□□□ -1.54
NR1H3-223ENST00000486991 SPRR2BP35325 72 aa5.44□□□□□ -1.54
NR1H3-223ENST00000486991 SPRR2AP35326 72 aa5.44□□□□□ -1.54
NR1H3-223ENST00000486991 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
NR1H3-223ENST00000486991 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
NR1H3-223ENST00000486991 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
NR1H3-223ENST00000486991 K7ERS5 55 aa5.33□□□□□ -1.56
NR1H3-223ENST00000486991 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
NR1H3-223ENST00000486991 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
NR1H3-223ENST00000486991 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
NR1H3-223ENST00000486991 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
NR1H3-223ENST00000486991 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
NR1H3-223ENST00000486991 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
NR1H3-223ENST00000486991 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
NR1H3-223ENST00000486991 SPRR2DP22532 72 aa5.25□□□□□ -1.57
NR1H3-223ENST00000486991 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
NR1H3-223ENST00000486991 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
NR1H3-223ENST00000486991 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
NR1H3-223ENST00000486991 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
NR1H3-223ENST00000486991 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
NR1H3-223ENST00000486991 TNP1P09430 55 aa5.11□□□□□ -1.59
NR1H3-223ENST00000486991 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
NR1H3-223ENST00000486991 ROMO1P60602 79 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms