RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 MT2AP02795 61 aa9.09□□□□□ -0.95
ATG9A-221ENST00000486766 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
ATG9A-221ENST00000486766 COX7CP15954 63 aa9.04□□□□□ -0.96
ATG9A-221ENST00000486766 DMAC1Q96GE9 116 aa9.04□□□□□ -0.96
ATG9A-221ENST00000486766 KRTAP10-10P60014 251 aa9.03□□□□□ -0.96
ATG9A-221ENST00000486766 MT1FP04733 61 aa9.02□□□□□ -0.97
ATG9A-221ENST00000486766 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
ATG9A-221ENST00000486766 NDUFC1O43677 76 aa9□□□□□ -0.97
ATG9A-221ENST00000486766 ANAPC13Q9BS18 74 aa8.99□□□□□ -0.97
ATG9A-221ENST00000486766 ACYP2P14621 99 aa8.93□□□□□ -0.98
ATG9A-221ENST00000486766 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
ATG9A-221ENST00000486766 KRTAP9-3Q9BYQ3 159 aa8.85□□□□□ -0.99
ATG9A-221ENST00000486766 CYSTM1Q9H1C7 97 aa8.81□□□□□ -1
ATG9A-221ENST00000486766 CHKB-CPT1BH3BT56 60 aa8.8□□□□□ -1
ATG9A-221ENST00000486766 H7BZZ5 65 aa8.79□□□□□ -1
ATG9A-221ENST00000486766 KRTAP9-7A8MTY7 169 aa8.78□□□□□ -1
ATG9A-221ENST00000486766 CCDC179H3BU77 68 aa8.78□□□□□ -1
ATG9A-221ENST00000486766 H0YAA0 97 aa8.76□□□□□ -1.01
ATG9A-221ENST00000486766 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
ATG9A-221ENST00000486766 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
ATG9A-221ENST00000486766 LCE2BO14633 110 aa8.71□□□□□ -1.02
ATG9A-221ENST00000486766 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.67□□□□□ -1.02
ATG9A-221ENST00000486766 COA5Q86WW8 74 aa8.66□□□□□ -1.02
ATG9A-221ENST00000486766 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
ATG9A-221ENST00000486766 KRTAP19-1Q8IUB9 90 aa8.6□□□□□ -1.03
ATG9A-221ENST00000486766 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
ATG9A-221ENST00000486766 USH2AO75445 5202 aa8.58□□□□□ -1.04
ATG9A-221ENST00000486766 P0C880 135 aa8.56□□□□□ -1.04
ATG9A-221ENST00000486766 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
ATG9A-221ENST00000486766 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
ATG9A-221ENST00000486766 TMEM258P61165 79 aa8.48□□□□□ -1.05
ATG9A-221ENST00000486766 R4GN34 69 aa8.47□□□□□ -1.05
ATG9A-221ENST00000486766 Q5VV11 94 aa8.46□□□□□ -1.06
ATG9A-221ENST00000486766 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
ATG9A-221ENST00000486766 M0QZ58 72 aa8.43□□□□□ -1.06
ATG9A-221ENST00000486766 MT1BP07438 61 aa8.39□□□□□ -1.07
ATG9A-221ENST00000486766 SSPOA2VEC9 5147 aa8.38□□□□□ -1.07
ATG9A-221ENST00000486766 SEC61GP60059 68 aa8.38□□□□□ -1.07
ATG9A-221ENST00000486766 KRTAP19-6Q3LI70 58 aa8.34□□□□□ -1.07
ATG9A-221ENST00000486766 SERP1Q9Y6X1 66 aa8.34□□□□□ -1.07
ATG9A-221ENST00000486766 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
ATG9A-221ENST00000486766 PCP4P48539 62 aa8.26□□□□□ -1.09
ATG9A-221ENST00000486766 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
ATG9A-221ENST00000486766 A0A1B0GU69 56 aa8.22□□□□□ -1.09
ATG9A-221ENST00000486766 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
ATG9A-221ENST00000486766 A6NN06 94 aa8.17□□□□□ -1.1
ATG9A-221ENST00000486766 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
ATG9A-221ENST00000486766 A0A1B0GU33 70 aa8.15□□□□□ -1.1
ATG9A-221ENST00000486766 PRR15LQ9BU68 103 aa8.13□□□□□ -1.11
ATG9A-221ENST00000486766 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
ATG9A-221ENST00000486766 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
ATG9A-221ENST00000486766 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.12
ATG9A-221ENST00000486766 SPATA8Q6RVD6 105 aa8.07□□□□□ -1.12
ATG9A-221ENST00000486766 PRO2289Q9P1D8 64 aa8.03□□□□□ -1.12
ATG9A-221ENST00000486766 A0A0D9SG42 100 aa8.02□□□□□ -1.13
ATG9A-221ENST00000486766 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
ATG9A-221ENST00000486766 MT1XP80297 61 aa7.98□□□□□ -1.13
ATG9A-221ENST00000486766 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
ATG9A-221ENST00000486766 V9GYY9 64 aa7.94□□□□□ -1.14
ATG9A-221ENST00000486766 Q1T7F1 81 aa7.88□□□□□ -1.15
ATG9A-221ENST00000486766 KRTAP6-3Q3LI67 103 aa7.88□□□□□ -1.15
ATG9A-221ENST00000486766 SPINT4Q6UDR6 99 aa7.88□□□□□ -1.15
ATG9A-221ENST00000486766 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
ATG9A-221ENST00000486766 A8MU10 97 aa7.86□□□□□ -1.15
ATG9A-221ENST00000486766 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
ATG9A-221ENST00000486766 UQCR11O14957 56 aa7.85□□□□□ -1.15
ATG9A-221ENST00000486766 PSPHP1O15172 72 aa7.83□□□□□ -1.16
ATG9A-221ENST00000486766 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
ATG9A-221ENST00000486766 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
ATG9A-221ENST00000486766 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
ATG9A-221ENST00000486766 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
ATG9A-221ENST00000486766 KRTAP20-1Q3LI63 56 aa7.62□□□□□ -1.19
ATG9A-221ENST00000486766 A6NED7 52 aa7.6□□□□□ -1.19
ATG9A-221ENST00000486766 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
ATG9A-221ENST00000486766 NEBP20929 6669 aa7.58□□□□□ -1.2
ATG9A-221ENST00000486766 KMT2DO14686 5537 aa7.55□□□□□ -1.2
ATG9A-221ENST00000486766 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
ATG9A-221ENST00000486766 K7ERS5 55 aa7.51□□□□□ -1.21
ATG9A-221ENST00000486766 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
ATG9A-221ENST00000486766 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
ATG9A-221ENST00000486766 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
ATG9A-221ENST00000486766 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
ATG9A-221ENST00000486766 C10orf95Q9H7T3 257 aa7.44□□□□□ -1.22
ATG9A-221ENST00000486766 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
ATG9A-221ENST00000486766 TNP1P09430 55 aa7.36□□□□□ -1.23
ATG9A-221ENST00000486766 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.23
ATG9A-221ENST00000486766 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
ATG9A-221ENST00000486766 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
ATG9A-221ENST00000486766 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
ATG9A-221ENST00000486766 SPRR2EP22531 72 aa7.18□□□□□ -1.26
ATG9A-221ENST00000486766 SPRR2BP35325 72 aa7.18□□□□□ -1.26
ATG9A-221ENST00000486766 SPRR2AP35326 72 aa7.18□□□□□ -1.26
ATG9A-221ENST00000486766 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
ATG9A-221ENST00000486766 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.26
ATG9A-221ENST00000486766 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
ATG9A-221ENST00000486766 LCE1AQ5T7P2 110 aa7.1□□□□□ -1.27
ATG9A-221ENST00000486766 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
ATG9A-221ENST00000486766 ROMO1P60602 79 aa7.06□□□□□ -1.28
ATG9A-221ENST00000486766 MT1EP04732 61 aa7.05□□□□□ -1.28
ATG9A-221ENST00000486766 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms