RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 USH2AO75445 5202 aa6.22□□□□□ -1.41
HDAC6-229ENST00000486665 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
HDAC6-229ENST00000486665 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-229ENST00000486665 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
HDAC6-229ENST00000486665 A8MUN3 132 aa6.19□□□□□ -1.42
HDAC6-229ENST00000486665 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
HDAC6-229ENST00000486665 S4R3F8 94 aa6.18□□□□□ -1.42
HDAC6-229ENST00000486665 H7BZZ5 65 aa6.17□□□□□ -1.42
HDAC6-229ENST00000486665 NDUFC1O43677 76 aa6.16□□□□□ -1.42
HDAC6-229ENST00000486665 LCA10Q71F78 164 aa6.16□□□□□ -1.42
HDAC6-229ENST00000486665 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
HDAC6-229ENST00000486665 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
HDAC6-229ENST00000486665 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
HDAC6-229ENST00000486665 ACYP2P14621 99 aa6.11□□□□□ -1.43
HDAC6-229ENST00000486665 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-229ENST00000486665 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
HDAC6-229ENST00000486665 MT2AP02795 61 aa6.03□□□□□ -1.44
HDAC6-229ENST00000486665 LCE2BO14633 110 aa6.02□□□□□ -1.45
HDAC6-229ENST00000486665 PCP4P48539 62 aa6.02□□□□□ -1.45
HDAC6-229ENST00000486665 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
HDAC6-229ENST00000486665 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
HDAC6-229ENST00000486665 MT1FP04733 61 aa5.99□□□□□ -1.45
HDAC6-229ENST00000486665 COA5Q86WW8 74 aa5.99□□□□□ -1.45
HDAC6-229ENST00000486665 TMEM258P61165 79 aa5.96□□□□□ -1.46
HDAC6-229ENST00000486665 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
HDAC6-229ENST00000486665 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
HDAC6-229ENST00000486665 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
HDAC6-229ENST00000486665 SPTSSBQ8NFR3 76 aa5.92□□□□□ -1.46
HDAC6-229ENST00000486665 H0YAA0 97 aa5.89□□□□□ -1.47
HDAC6-229ENST00000486665 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
HDAC6-229ENST00000486665 ADM2Q7Z4H4 148 aa5.88□□□□□ -1.47
HDAC6-229ENST00000486665 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
HDAC6-229ENST00000486665 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
HDAC6-229ENST00000486665 P0C880 135 aa5.82□□□□□ -1.48
HDAC6-229ENST00000486665 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
HDAC6-229ENST00000486665 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
HDAC6-229ENST00000486665 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
HDAC6-229ENST00000486665 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
HDAC6-229ENST00000486665 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
HDAC6-229ENST00000486665 SEC61GP60059 68 aa5.69□□□□□ -1.5
HDAC6-229ENST00000486665 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
HDAC6-229ENST00000486665 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
HDAC6-229ENST00000486665 R4GN34 69 aa5.66□□□□□ -1.5
HDAC6-229ENST00000486665 A0A1B0GU69 56 aa5.65□□□□□ -1.5
HDAC6-229ENST00000486665 M0QZ58 72 aa5.65□□□□□ -1.5
HDAC6-229ENST00000486665 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
HDAC6-229ENST00000486665 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
HDAC6-229ENST00000486665 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
HDAC6-229ENST00000486665 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
HDAC6-229ENST00000486665 A0A1B0GU33 70 aa5.6□□□□□ -1.51
HDAC6-229ENST00000486665 MT1BP07438 61 aa5.6□□□□□ -1.51
HDAC6-229ENST00000486665 Q5VV11 94 aa5.58□□□□□ -1.52
HDAC6-229ENST00000486665 Q1T7F1 81 aa5.57□□□□□ -1.52
HDAC6-229ENST00000486665 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
HDAC6-229ENST00000486665 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
HDAC6-229ENST00000486665 NEBP20929 6669 aa5.55□□□□□ -1.52
HDAC6-229ENST00000486665 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
HDAC6-229ENST00000486665 V9GYY9 64 aa5.54□□□□□ -1.52
HDAC6-229ENST00000486665 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
HDAC6-229ENST00000486665 PSPHP1O15172 72 aa5.5□□□□□ -1.53
HDAC6-229ENST00000486665 A0A0D9SG42 100 aa5.46□□□□□ -1.54
HDAC6-229ENST00000486665 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
HDAC6-229ENST00000486665 A6NN06 94 aa5.43□□□□□ -1.54
HDAC6-229ENST00000486665 A8MU10 97 aa5.43□□□□□ -1.54
HDAC6-229ENST00000486665 UQCR11O14957 56 aa5.42□□□□□ -1.54
HDAC6-229ENST00000486665 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
HDAC6-229ENST00000486665 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
HDAC6-229ENST00000486665 KRTAP12-1P59990 96 aa5.36□□□□□ -1.55
HDAC6-229ENST00000486665 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
HDAC6-229ENST00000486665 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
HDAC6-229ENST00000486665 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
HDAC6-229ENST00000486665 KMT2DO14686 5537 aa5.34□□□□□ -1.55
HDAC6-229ENST00000486665 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
HDAC6-229ENST00000486665 MT1XP80297 61 aa5.34□□□□□ -1.55
HDAC6-229ENST00000486665 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
HDAC6-229ENST00000486665 A6NED7 52 aa5.31□□□□□ -1.56
HDAC6-229ENST00000486665 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
HDAC6-229ENST00000486665 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
HDAC6-229ENST00000486665 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
HDAC6-229ENST00000486665 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
HDAC6-229ENST00000486665 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
HDAC6-229ENST00000486665 K7ERS5 55 aa5.12□□□□□ -1.59
HDAC6-229ENST00000486665 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
HDAC6-229ENST00000486665 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
HDAC6-229ENST00000486665 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
HDAC6-229ENST00000486665 SPRR2EP22531 72 aa5.08□□□□□ -1.6
HDAC6-229ENST00000486665 SPRR2BP35325 72 aa5.08□□□□□ -1.6
HDAC6-229ENST00000486665 SPRR2AP35326 72 aa5.08□□□□□ -1.6
HDAC6-229ENST00000486665 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
HDAC6-229ENST00000486665 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
HDAC6-229ENST00000486665 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
HDAC6-229ENST00000486665 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
HDAC6-229ENST00000486665 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
HDAC6-229ENST00000486665 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
HDAC6-229ENST00000486665 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
HDAC6-229ENST00000486665 TNP1P09430 55 aa4.96□□□□□ -1.62
HDAC6-229ENST00000486665 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
HDAC6-229ENST00000486665 SPRR2DP22532 72 aa4.91□□□□□ -1.62
HDAC6-229ENST00000486665 ROMO1P60602 79 aa4.9□□□□□ -1.63
HDAC6-229ENST00000486665 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms