RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 KRTAP3-1Q9BYR8 98 aa6.88□□□□□ -1.31
NELFCD-209ENST00000486263 M0R2T5 61 aa6.87□□□□□ -1.31
NELFCD-209ENST00000486263 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
NELFCD-209ENST00000486263 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
NELFCD-209ENST00000486263 H7BZZ5 65 aa6.83□□□□□ -1.32
NELFCD-209ENST00000486263 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
NELFCD-209ENST00000486263 S4R3F8 94 aa6.83□□□□□ -1.32
NELFCD-209ENST00000486263 ACYP2P14621 99 aa6.82□□□□□ -1.32
NELFCD-209ENST00000486263 PCP4P48539 62 aa6.77□□□□□ -1.33
NELFCD-209ENST00000486263 LCA10Q71F78 164 aa6.76□□□□□ -1.33
NELFCD-209ENST00000486263 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
NELFCD-209ENST00000486263 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
NELFCD-209ENST00000486263 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
NELFCD-209ENST00000486263 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
NELFCD-209ENST00000486263 TMEM258P61165 79 aa6.7□□□□□ -1.34
NELFCD-209ENST00000486263 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
NELFCD-209ENST00000486263 COA5Q86WW8 74 aa6.66□□□□□ -1.34
NELFCD-209ENST00000486263 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
NELFCD-209ENST00000486263 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
NELFCD-209ENST00000486263 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
NELFCD-209ENST00000486263 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
NELFCD-209ENST00000486263 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
NELFCD-209ENST00000486263 H0YAA0 97 aa6.5□□□□□ -1.37
NELFCD-209ENST00000486263 MT2AP02795 61 aa6.5□□□□□ -1.37
NELFCD-209ENST00000486263 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
NELFCD-209ENST00000486263 ADM2Q7Z4H4 148 aa6.49□□□□□ -1.37
NELFCD-209ENST00000486263 MT1FP04733 61 aa6.44□□□□□ -1.38
NELFCD-209ENST00000486263 SEC61GP60059 68 aa6.44□□□□□ -1.38
NELFCD-209ENST00000486263 P0C880 135 aa6.36□□□□□ -1.39
NELFCD-209ENST00000486263 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
NELFCD-209ENST00000486263 H3BS24 57 aa6.35□□□□□ -1.39
NELFCD-209ENST00000486263 USH2AO75445 5202 aa6.35□□□□□ -1.39
NELFCD-209ENST00000486263 A0A1B0GU69 56 aa6.34□□□□□ -1.39
NELFCD-209ENST00000486263 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
NELFCD-209ENST00000486263 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
NELFCD-209ENST00000486263 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
NELFCD-209ENST00000486263 R4GN34 69 aa6.3□□□□□ -1.4
NELFCD-209ENST00000486263 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
NELFCD-209ENST00000486263 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
NELFCD-209ENST00000486263 V9GYY9 64 aa6.28□□□□□ -1.4
NELFCD-209ENST00000486263 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
NELFCD-209ENST00000486263 M0QZ58 72 aa6.26□□□□□ -1.41
NELFCD-209ENST00000486263 A0A1B0GU33 70 aa6.23□□□□□ -1.41
NELFCD-209ENST00000486263 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
NELFCD-209ENST00000486263 Q1T7F1 81 aa6.21□□□□□ -1.42
NELFCD-209ENST00000486263 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
NELFCD-209ENST00000486263 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
NELFCD-209ENST00000486263 PSPHP1O15172 72 aa6.15□□□□□ -1.42
NELFCD-209ENST00000486263 Q5VV11 94 aa6.14□□□□□ -1.43
NELFCD-209ENST00000486263 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
NELFCD-209ENST00000486263 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
NELFCD-209ENST00000486263 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
NELFCD-209ENST00000486263 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
NELFCD-209ENST00000486263 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
NELFCD-209ENST00000486263 UQCR11O14957 56 aa6.09□□□□□ -1.43
NELFCD-209ENST00000486263 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
NELFCD-209ENST00000486263 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
NELFCD-209ENST00000486263 A0A0D9SG42 100 aa6.06□□□□□ -1.44
NELFCD-209ENST00000486263 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
NELFCD-209ENST00000486263 MT1BP07438 61 aa6.03□□□□□ -1.44
NELFCD-209ENST00000486263 A6NED7 52 aa6□□□□□ -1.45
NELFCD-209ENST00000486263 A6NN06 94 aa6□□□□□ -1.45
NELFCD-209ENST00000486263 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
NELFCD-209ENST00000486263 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
NELFCD-209ENST00000486263 A8MU10 97 aa5.97□□□□□ -1.45
NELFCD-209ENST00000486263 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
NELFCD-209ENST00000486263 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.47
NELFCD-209ENST00000486263 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
NELFCD-209ENST00000486263 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
NELFCD-209ENST00000486263 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
NELFCD-209ENST00000486263 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
NELFCD-209ENST00000486263 K7ERS5 55 aa5.85□□□□□ -1.47
NELFCD-209ENST00000486263 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
NELFCD-209ENST00000486263 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
NELFCD-209ENST00000486263 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
NELFCD-209ENST00000486263 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
NELFCD-209ENST00000486263 MT1XP80297 61 aa5.77□□□□□ -1.49
NELFCD-209ENST00000486263 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
NELFCD-209ENST00000486263 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
NELFCD-209ENST00000486263 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
NELFCD-209ENST00000486263 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
NELFCD-209ENST00000486263 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
NELFCD-209ENST00000486263 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
NELFCD-209ENST00000486263 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
NELFCD-209ENST00000486263 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
NELFCD-209ENST00000486263 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
NELFCD-209ENST00000486263 NEBP20929 6669 aa5.55□□□□□ -1.52
NELFCD-209ENST00000486263 TNP1P09430 55 aa5.54□□□□□ -1.52
NELFCD-209ENST00000486263 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
NELFCD-209ENST00000486263 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
NELFCD-209ENST00000486263 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
NELFCD-209ENST00000486263 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
NELFCD-209ENST00000486263 ROMO1P60602 79 aa5.49□□□□□ -1.53
NELFCD-209ENST00000486263 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
NELFCD-209ENST00000486263 KMT2DO14686 5537 aa5.43□□□□□ -1.54
NELFCD-209ENST00000486263 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
NELFCD-209ENST00000486263 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
NELFCD-209ENST00000486263 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
NELFCD-209ENST00000486263 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
NELFCD-209ENST00000486263 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms