RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
PKP4-213ENST00000486254 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
PKP4-213ENST00000486254 SPINK7P58062 85 aa6.35□□□□□ -1.39
PKP4-213ENST00000486254 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
PKP4-213ENST00000486254 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
PKP4-213ENST00000486254 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
PKP4-213ENST00000486254 Q5VV11 94 aa6.33□□□□□ -1.4
PKP4-213ENST00000486254 PSPHP1O15172 72 aa6.31□□□□□ -1.4
PKP4-213ENST00000486254 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
PKP4-213ENST00000486254 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
PKP4-213ENST00000486254 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
PKP4-213ENST00000486254 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
PKP4-213ENST00000486254 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
PKP4-213ENST00000486254 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
PKP4-213ENST00000486254 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
PKP4-213ENST00000486254 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
PKP4-213ENST00000486254 BRK1Q8WUW1 75 aa6.23□□□□□ -1.41
PKP4-213ENST00000486254 A0A1B0GU69 56 aa6.18□□□□□ -1.42
PKP4-213ENST00000486254 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
PKP4-213ENST00000486254 A6NED7 52 aa6.16□□□□□ -1.42
PKP4-213ENST00000486254 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
PKP4-213ENST00000486254 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
PKP4-213ENST00000486254 J3QL48 77 aa6.14□□□□□ -1.43
PKP4-213ENST00000486254 HERC2O95714 4834 aa6.12□□□□□ -1.43
PKP4-213ENST00000486254 SEC61GP60059 68 aa6.1□□□□□ -1.43
PKP4-213ENST00000486254 LCA10Q71F78 164 aa6.1□□□□□ -1.43
PKP4-213ENST00000486254 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
PKP4-213ENST00000486254 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
PKP4-213ENST00000486254 UQCR11O14957 56 aa6.07□□□□□ -1.44
PKP4-213ENST00000486254 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
PKP4-213ENST00000486254 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
PKP4-213ENST00000486254 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
PKP4-213ENST00000486254 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
PKP4-213ENST00000486254 S4R3F8 94 aa6.03□□□□□ -1.44
PKP4-213ENST00000486254 LRP2P98164 4655 aa6□□□□□ -1.45
PKP4-213ENST00000486254 A8MU10 97 aa6□□□□□ -1.45
PKP4-213ENST00000486254 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
PKP4-213ENST00000486254 A0A1B0GU33 70 aa5.93□□□□□ -1.46
PKP4-213ENST00000486254 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
PKP4-213ENST00000486254 LPAP08519 4548 aa5.91□□□□□ -1.46
PKP4-213ENST00000486254 A6NN06 94 aa5.89□□□□□ -1.47
PKP4-213ENST00000486254 CSAG1Q6PB30 78 aa5.89□□□□□ -1.47
PKP4-213ENST00000486254 H0YAA0 97 aa5.89□□□□□ -1.47
PKP4-213ENST00000486254 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
PKP4-213ENST00000486254 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
PKP4-213ENST00000486254 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
PKP4-213ENST00000486254 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
PKP4-213ENST00000486254 PCLOQ9Y6V0 5065 aa5.79□□□□□ -1.48
PKP4-213ENST00000486254 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
PKP4-213ENST00000486254 P0C880 135 aa5.76□□□□□ -1.49
PKP4-213ENST00000486254 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
PKP4-213ENST00000486254 M0QZ58 72 aa5.73□□□□□ -1.49
PKP4-213ENST00000486254 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
PKP4-213ENST00000486254 HERC1Q15751 4861 aa5.72□□□□□ -1.49
PKP4-213ENST00000486254 K7ERS5 55 aa5.72□□□□□ -1.49
PKP4-213ENST00000486254 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
PKP4-213ENST00000486254 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
PKP4-213ENST00000486254 A0A0D9SG42 100 aa5.57□□□□□ -1.52
PKP4-213ENST00000486254 R4GN34 69 aa5.56□□□□□ -1.52
PKP4-213ENST00000486254 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
PKP4-213ENST00000486254 CRIPTQ9P021 101 aa5.55□□□□□ -1.52
PKP4-213ENST00000486254 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
PKP4-213ENST00000486254 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
PKP4-213ENST00000486254 ROMO1P60602 79 aa5.5□□□□□ -1.53
PKP4-213ENST00000486254 MUC2Q02817 5179 aa5.48□□□□□ -1.53
PKP4-213ENST00000486254 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
PKP4-213ENST00000486254 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
PKP4-213ENST00000486254 MT1HP80294 61 aa5.43□□□□□ -1.54
PKP4-213ENST00000486254 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
PKP4-213ENST00000486254 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
PKP4-213ENST00000486254 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
PKP4-213ENST00000486254 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
PKP4-213ENST00000486254 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
PKP4-213ENST00000486254 M0R2T5 61 aa5.34□□□□□ -1.55
PKP4-213ENST00000486254 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
PKP4-213ENST00000486254 H3BS24 57 aa5.27□□□□□ -1.57
PKP4-213ENST00000486254 MT2AP02795 61 aa5.27□□□□□ -1.57
PKP4-213ENST00000486254 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
PKP4-213ENST00000486254 MT1FP04733 61 aa5.23□□□□□ -1.57
PKP4-213ENST00000486254 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
PKP4-213ENST00000486254 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
PKP4-213ENST00000486254 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.57
PKP4-213ENST00000486254 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
PKP4-213ENST00000486254 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
PKP4-213ENST00000486254 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
PKP4-213ENST00000486254 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
PKP4-213ENST00000486254 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
PKP4-213ENST00000486254 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
PKP4-213ENST00000486254 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
PKP4-213ENST00000486254 TNP1P09430 55 aa5.05□□□□□ -1.6
PKP4-213ENST00000486254 MT1BP07438 61 aa5.03□□□□□ -1.6
PKP4-213ENST00000486254 MT1XP80297 61 aa4.91□□□□□ -1.62
PKP4-213ENST00000486254 KRTAP10-5P60370 271 aa4.9□□□□□ -1.63
PKP4-213ENST00000486254 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
PKP4-213ENST00000486254 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
PKP4-213ENST00000486254 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
PKP4-213ENST00000486254 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
PKP4-213ENST00000486254 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
PKP4-213ENST00000486254 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
PKP4-213ENST00000486254 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms