RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 FLGP20930 4061 aaPredicted RBP10.78□□□□□ -0.68
NECAB3-211ENST00000485399 LORP23490 312 aaPredicted RBP10.77□□□□□ -0.68
NECAB3-211ENST00000485399 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
NECAB3-211ENST00000485399 KRTAP10-6P60371 365 aaPredicted RBP10.74□□□□□ -0.69
NECAB3-211ENST00000485399 PCP4P48539 62 aa10.71□□□□□ -0.69
NECAB3-211ENST00000485399 ACYP2P14621 99 aa10.68□□□□□ -0.7
NECAB3-211ENST00000485399 S4R3F8 94 aa10.67□□□□□ -0.7
NECAB3-211ENST00000485399 M0R2T5 61 aa10.62□□□□□ -0.71
NECAB3-211ENST00000485399 LCA10Q71F78 164 aa10.59□□□□□ -0.71
NECAB3-211ENST00000485399 ATP5EP56381 51 aaPredicted RBP10.57□□□□□ -0.72
NECAB3-211ENST00000485399 TMEM258P61165 79 aa10.57□□□□□ -0.72
NECAB3-211ENST00000485399 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
NECAB3-211ENST00000485399 CSAG1Q6PB30 78 aa10.5□□□□□ -0.73
NECAB3-211ENST00000485399 CHKB-CPT1BH3BT56 60 aa10.49□□□□□ -0.73
NECAB3-211ENST00000485399 COA5Q86WW8 74 aa10.46□□□□□ -0.74
NECAB3-211ENST00000485399 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
NECAB3-211ENST00000485399 USH2AO75445 5202 aa10.3□□□□□ -0.76
NECAB3-211ENST00000485399 SSPOA2VEC9 5147 aa10.3□□□□□ -0.76
NECAB3-211ENST00000485399 KRTAP9-8Q9BYQ0 159 aa10.28□□□□□ -0.76
NECAB3-211ENST00000485399 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.25□□□□□ -0.77
NECAB3-211ENST00000485399 SERP1Q9Y6X1 66 aa10.25□□□□□ -0.77
NECAB3-211ENST00000485399 H0YAA0 97 aa10.22□□□□□ -0.77
NECAB3-211ENST00000485399 KRTAP9-7A8MTY7 169 aa10.21□□□□□ -0.78
NECAB3-211ENST00000485399 MT2AP02795 61 aa10.18□□□□□ -0.78
NECAB3-211ENST00000485399 KRTAP10-10P60014 251 aa10.13□□□□□ -0.79
NECAB3-211ENST00000485399 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
NECAB3-211ENST00000485399 MT1FP04733 61 aa10.11□□□□□ -0.79
NECAB3-211ENST00000485399 FCGBPQ9Y6R7 5405 aaPredicted RBP10.1□□□□□ -0.79
NECAB3-211ENST00000485399 RPS28P62857 69 aaKnown RBP10.03□□□□□ -0.8
NECAB3-211ENST00000485399 SEC61GP60059 68 aa10.02□□□□□ -0.8
NECAB3-211ENST00000485399 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.8
NECAB3-211ENST00000485399 LCE2BO14633 110 aa10.01□□□□□ -0.81
NECAB3-211ENST00000485399 P0C880 135 aa9.99□□□□□ -0.81
NECAB3-211ENST00000485399 KRTAP19-1Q8IUB9 90 aa9.97□□□□□ -0.81
NECAB3-211ENST00000485399 KRTAP9-3Q9BYQ3 159 aa9.97□□□□□ -0.81
NECAB3-211ENST00000485399 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
NECAB3-211ENST00000485399 LINC01558Q9Y6Z2 57 aa9.93□□□□□ -0.82
NECAB3-211ENST00000485399 A0A1B0GU69 56 aa9.92□□□□□ -0.82
NECAB3-211ENST00000485399 SMIM26A0A096LP01 95 aa9.91□□□□□ -0.82
NECAB3-211ENST00000485399 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
NECAB3-211ENST00000485399 V9GYY9 64 aa9.87□□□□□ -0.83
NECAB3-211ENST00000485399 MACF1Q9UPN3 7388 aaKnown RBP9.82□□□□□ -0.84
NECAB3-211ENST00000485399 Q1T7F1 81 aa9.82□□□□□ -0.84
NECAB3-211ENST00000485399 R4GN34 69 aa9.82□□□□□ -0.84
NECAB3-211ENST00000485399 SPRR2GQ9BYE4 73 aa9.79□□□□□ -0.84
NECAB3-211ENST00000485399 M0QZ58 72 aa9.76□□□□□ -0.85
NECAB3-211ENST00000485399 A0A1B0GU33 70 aa9.75□□□□□ -0.85
NECAB3-211ENST00000485399 SYNE2Q8WXH0 6885 aaKnown RBP9.74□□□□□ -0.85
NECAB3-211ENST00000485399 KRTAP19-6Q3LI70 58 aa9.71□□□□□ -0.86
NECAB3-211ENST00000485399 PSPHP1O15172 72 aa9.64□□□□□ -0.87
NECAB3-211ENST00000485399 KRTAP13-4Q3LI77 160 aa9.63□□□□□ -0.87
NECAB3-211ENST00000485399 Q5VV11 94 aa9.63□□□□□ -0.87
NECAB3-211ENST00000485399 KRTAP19-8Q3LI54 63 aa9.61□□□□□ -0.87
NECAB3-211ENST00000485399 LINC01554Q52M75 96 aa9.58□□□□□ -0.88
NECAB3-211ENST00000485399 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
NECAB3-211ENST00000485399 UQCR11O14957 56 aa9.55□□□□□ -0.88
NECAB3-211ENST00000485399 MT1BP07438 61 aa9.49□□□□□ -0.89
NECAB3-211ENST00000485399 A0A0D9SG42 100 aa9.44□□□□□ -0.9
NECAB3-211ENST00000485399 A6NN06 94 aa9.44□□□□□ -0.9
NECAB3-211ENST00000485399 KRTAP6-3Q3LI67 103 aa9.44□□□□□ -0.9
NECAB3-211ENST00000485399 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
NECAB3-211ENST00000485399 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
NECAB3-211ENST00000485399 A6NED7 52 aa9.38□□□□□ -0.91
NECAB3-211ENST00000485399 A8MU10 97 aa9.37□□□□□ -0.91
NECAB3-211ENST00000485399 SPINT4Q6UDR6 99 aa9.27□□□□□ -0.93
NECAB3-211ENST00000485399 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
NECAB3-211ENST00000485399 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
NECAB3-211ENST00000485399 MUC12Q9UKN1 5478 aa9.18□□□□□ -0.94
NECAB3-211ENST00000485399 NEBP20929 6669 aa9.17□□□□□ -0.94
NECAB3-211ENST00000485399 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.94
NECAB3-211ENST00000485399 CDC42SE1Q9NRR8 79 aa9.15□□□□□ -0.94
NECAB3-211ENST00000485399 KRTAP10-5P60370 271 aa9.12□□□□□ -0.95
NECAB3-211ENST00000485399 PRO2289Q9P1D8 64 aa9.11□□□□□ -0.95
NECAB3-211ENST00000485399 K7ERS5 55 aa9.1□□□□□ -0.95
NECAB3-211ENST00000485399 MT1XP80297 61 aa9.08□□□□□ -0.96
NECAB3-211ENST00000485399 BRK1Q8WUW1 75 aa8.94□□□□□ -0.98
NECAB3-211ENST00000485399 KRTAP5-9P26371 169 aa8.89□□□□□ -0.99
NECAB3-211ENST00000485399 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
NECAB3-211ENST00000485399 MDN1Q9NU22 5596 aa8.89□□□□□ -0.99
NECAB3-211ENST00000485399 KMT2DO14686 5537 aa8.88□□□□□ -0.99
NECAB3-211ENST00000485399 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
NECAB3-211ENST00000485399 KRTAP10-7P60409 375 aaPredicted RBP8.68□□□□□ -1.02
NECAB3-211ENST00000485399 TNP1P09430 55 aa8.64□□□□□ -1.03
NECAB3-211ENST00000485399 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
NECAB3-211ENST00000485399 ROMO1P60602 79 aa8.61□□□□□ -1.03
NECAB3-211ENST00000485399 KRTAP2-3P0C7H8 128 aa8.57□□□□□ -1.04
NECAB3-211ENST00000485399 KRTAP2-4Q9BYR9 128 aa8.57□□□□□ -1.04
NECAB3-211ENST00000485399 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
NECAB3-211ENST00000485399 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
NECAB3-211ENST00000485399 SPRR2FQ96RM1 72 aa8.49□□□□□ -1.05
NECAB3-211ENST00000485399 SPRR2EP22531 72 aa8.46□□□□□ -1.06
NECAB3-211ENST00000485399 SPRR2BP35325 72 aa8.46□□□□□ -1.06
NECAB3-211ENST00000485399 SPRR2AP35326 72 aa8.46□□□□□ -1.06
NECAB3-211ENST00000485399 PMAIP1Q13794 54 aa8.46□□□□□ -1.06
NECAB3-211ENST00000485399 KRTAP4-8A0A0G2JLE6 195 aa8.43□□□□□ -1.06
NECAB3-211ENST00000485399 KRTAP4-8Q9BYQ9 185 aa8.43□□□□□ -1.06
NECAB3-211ENST00000485399 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
NECAB3-211ENST00000485399 LCE1AQ5T7P2 110 aa8.34□□□□□ -1.07
NECAB3-211ENST00000485399 LCE3AQ5TA76 89 aa8.31□□□□□ -1.08
NECAB3-211ENST00000485399 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms