RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 SPTSSBQ8NFR3 76 aa12.63□□□□□ -0.39
TNFRSF25-215ENST00000485036 S4R3F8 94 aa12.58□□□□□ -0.4
TNFRSF25-215ENST00000485036 LCA10Q71F78 164 aa12.57□□□□□ -0.4
TNFRSF25-215ENST00000485036 KRTAP3-3Q9BYR6 98 aa12.55□□□□□ -0.4
TNFRSF25-215ENST00000485036 KRTAP19-2Q3LHN2 52 aa12.53□□□□□ -0.4
TNFRSF25-215ENST00000485036 MUC2Q02817 5179 aa12.51□□□□□ -0.41
TNFRSF25-215ENST00000485036 PSPHP1O15172 72 aa12.5□□□□□ -0.41
TNFRSF25-215ENST00000485036 PRR15LQ9BU68 103 aa12.5□□□□□ -0.41
TNFRSF25-215ENST00000485036 Q5VV11 94 aa12.44□□□□□ -0.42
TNFRSF25-215ENST00000485036 UBR4Q5T4S7 5183 aa12.41□□□□□ -0.42
TNFRSF25-215ENST00000485036 A0A1B0GU69 56 aa12.39□□□□□ -0.43
TNFRSF25-215ENST00000485036 RNF213Q63HN8 5207 aa12.37□□□□□ -0.43
TNFRSF25-215ENST00000485036 SEC61GP60059 68 aa12.28□□□□□ -0.44
TNFRSF25-215ENST00000485036 CSAG1Q6PB30 78 aa12.28□□□□□ -0.44
TNFRSF25-215ENST00000485036 FLGP20930 4061 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF25-215ENST00000485036 LCE2CQ5TA81 110 aa12.18□□□□□ -0.46
TNFRSF25-215ENST00000485036 A6NED7 52 aa12.11□□□□□ -0.47
TNFRSF25-215ENST00000485036 KRTAP3-2Q9BYR7 98 aa12.11□□□□□ -0.47
TNFRSF25-215ENST00000485036 KRTAP10-6P60371 365 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF25-215ENST00000485036 H0YAA0 97 aa12.08□□□□□ -0.47
TNFRSF25-215ENST00000485036 UQCR11O14957 56 aa12.04□□□□□ -0.48
TNFRSF25-215ENST00000485036 BRK1Q8WUW1 75 aa12.03□□□□□ -0.48
TNFRSF25-215ENST00000485036 FAT4Q6V0I7 4981 aa12.02□□□□□ -0.48
TNFRSF25-215ENST00000485036 ADM2Q7Z4H4 148 aa12.02□□□□□ -0.49
TNFRSF25-215ENST00000485036 A0A1B0GU33 70 aa12□□□□□ -0.49
TNFRSF25-215ENST00000485036 P0C880 135 aa11.98□□□□□ -0.49
TNFRSF25-215ENST00000485036 CDC42SE1Q9NRR8 79 aa11.96□□□□□ -0.49
TNFRSF25-215ENST00000485036 MT1HP80294 61 aa11.91□□□□□ -0.5
TNFRSF25-215ENST00000485036 SPATA8Q6RVD6 105 aa11.91□□□□□ -0.5
TNFRSF25-215ENST00000485036 A8MU10 97 aa11.9□□□□□ -0.5
TNFRSF25-215ENST00000485036 MIR22HGQ0VDD5 57 aa11.89□□□□□ -0.51
TNFRSF25-215ENST00000485036 PRO0628Q9UI54 55 aa11.81□□□□□ -0.52
TNFRSF25-215ENST00000485036 KRTAP13-4Q3LI77 160 aa11.78□□□□□ -0.52
TNFRSF25-215ENST00000485036 M0R2T5 61 aa11.73□□□□□ -0.53
TNFRSF25-215ENST00000485036 M0QZ58 72 aa11.69□□□□□ -0.54
TNFRSF25-215ENST00000485036 LORP23490 312 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF25-215ENST00000485036 R4GN34 69 aa11.58□□□□□ -0.56
TNFRSF25-215ENST00000485036 LCE2AQ5TA79 106 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF25-215ENST00000485036 CRIPTQ9P021 101 aa11.52□□□□□ -0.57
TNFRSF25-215ENST00000485036 KRTAP9-8Q9BYQ0 159 aa11.5□□□□□ -0.57
TNFRSF25-215ENST00000485036 A0A0D9SG42 100 aa11.49□□□□□ -0.57
TNFRSF25-215ENST00000485036 MT2AP02795 61 aa11.46□□□□□ -0.58
TNFRSF25-215ENST00000485036 MT1FP04733 61 aa11.4□□□□□ -0.58
TNFRSF25-215ENST00000485036 PMAIP1Q13794 54 aa11.36□□□□□ -0.59
TNFRSF25-215ENST00000485036 A6NN06 94 aa11.35□□□□□ -0.59
TNFRSF25-215ENST00000485036 LINC01554Q52M75 96 aa11.34□□□□□ -0.59
TNFRSF25-215ENST00000485036 KRTAP12-1P59990 96 aa11.33□□□□□ -0.6
TNFRSF25-215ENST00000485036 K7ERS5 55 aa11.32□□□□□ -0.6
TNFRSF25-215ENST00000485036 KRTAP10-10P60014 251 aa11.32□□□□□ -0.6
TNFRSF25-215ENST00000485036 KRTAP12-2P59991 146 aa11.29□□□□□ -0.6
TNFRSF25-215ENST00000485036 SPRR2GQ9BYE4 73 aa11.29□□□□□ -0.6
TNFRSF25-215ENST00000485036 KRTAP19-1Q8IUB9 90 aa11.23□□□□□ -0.61
TNFRSF25-215ENST00000485036 SPINT4Q6UDR6 99 aa11.22□□□□□ -0.61
TNFRSF25-215ENST00000485036 KRTAP9-3Q9BYQ3 159 aa11.09□□□□□ -0.63
TNFRSF25-215ENST00000485036 KRTAP19-8Q3LI54 63 aa10.98□□□□□ -0.65
TNFRSF25-215ENST00000485036 KTN1-AS1Q86SY8 53 aa10.95□□□□□ -0.66
TNFRSF25-215ENST00000485036 SVIPQ8NHG7 77 aa10.92□□□□□ -0.66
TNFRSF25-215ENST00000485036 ROMO1P60602 79 aa10.89□□□□□ -0.67
TNFRSF25-215ENST00000485036 PLAC4Q8WY50 150 aa10.85□□□□□ -0.67
TNFRSF25-215ENST00000485036 CAMK2N1Q7Z7J9 78 aa10.84□□□□□ -0.67
TNFRSF25-215ENST00000485036 MT1BP07438 61 aa10.82□□□□□ -0.68
TNFRSF25-215ENST00000485036 LCE2BO14633 110 aa10.75□□□□□ -0.69
TNFRSF25-215ENST00000485036 C10orf95Q9H7T3 257 aa10.71□□□□□ -0.69
TNFRSF25-215ENST00000485036 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF25-215ENST00000485036 PRAC1Q96KF2 57 aa10.65□□□□□ -0.7
TNFRSF25-215ENST00000485036 USH2AO75445 5202 aa10.51□□□□□ -0.73
TNFRSF25-215ENST00000485036 MT1XP80297 61 aa10.48□□□□□ -0.73
TNFRSF25-215ENST00000485036 KRTAP10-5P60370 271 aa10.46□□□□□ -0.74
TNFRSF25-215ENST00000485036 KRTAP9-2Q9BYQ4 174 aa10.46□□□□□ -0.74
TNFRSF25-215ENST00000485036 KRTAP25-1Q3LHN0 102 aa10.44□□□□□ -0.74
TNFRSF25-215ENST00000485036 TNP1P09430 55 aa10.35□□□□□ -0.75
TNFRSF25-215ENST00000485036 PRO2289Q9P1D8 64 aa10.32□□□□□ -0.76
TNFRSF25-215ENST00000485036 SSPOA2VEC9 5147 aa10.16□□□□□ -0.78
TNFRSF25-215ENST00000485036 KRTAP23-1A1A580 65 aa10.11□□□□□ -0.79
TNFRSF25-215ENST00000485036 PP632Q6XCG6 107 aa10.1□□□□□ -0.79
TNFRSF25-215ENST00000485036 FSIP2Q5CZC0 6907 aa10.1□□□□□ -0.79
TNFRSF25-215ENST00000485036 KRTAP19-6Q3LI70 58 aa10.1□□□□□ -0.79
TNFRSF25-215ENST00000485036 KRTAP10-7P60409 375 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF25-215ENST00000485036 CRCT1Q9UGL9 99 aa10.03□□□□□ -0.8
TNFRSF25-215ENST00000485036 KRTAP10-12P60413 245 aa9.95□□□□□ -0.82
TNFRSF25-215ENST00000485036 LCE3AQ5TA76 89 aa9.92□□□□□ -0.82
TNFRSF25-215ENST00000485036 KRTAP9-6A0A140TA67 174 aa9.79□□□□□ -0.84
TNFRSF25-215ENST00000485036 KRTAP8-1Q8IUC2 63 aa9.76□□□□□ -0.85
TNFRSF25-215ENST00000485036 FCGBPQ9Y6R7 5405 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF25-215ENST00000485036 KMT2DO14686 5537 aa9.65□□□□□ -0.87
TNFRSF25-215ENST00000485036 KRTAP4-8A0A0G2JLE6 195 aa9.62□□□□□ -0.87
TNFRSF25-215ENST00000485036 KRTAP4-8Q9BYQ9 185 aa9.62□□□□□ -0.87
TNFRSF25-215ENST00000485036 KRTAP12-3P60328 96 aa9.51□□□□□ -0.89
TNFRSF25-215ENST00000485036 KRTAP19-5Q3LI72 72 aa9.45□□□□□ -0.9
TNFRSF25-215ENST00000485036 KRTAP19-7Q3SYF9 63 aa9.36□□□□□ -0.91
TNFRSF25-215ENST00000485036 KRTAP15-1Q3LI76 137 aa9.34□□□□□ -0.91
TNFRSF25-215ENST00000485036 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF25-215ENST00000485036 MACF1Q9UPN3 7388 aaKnown RBP9.23□□□□□ -0.93
TNFRSF25-215ENST00000485036 MT1EP04732 61 aa9.18□□□□□ -0.94
TNFRSF25-215ENST00000485036 SPRR5A0A1B0GTR4 108 aa9.02□□□□□ -0.96
TNFRSF25-215ENST00000485036 MT1LQ93083 61 aa9.01□□□□□ -0.97
TNFRSF25-215ENST00000485036 KRTAP6-3Q3LI67 103 aa8.97□□□□□ -0.97
TNFRSF25-215ENST00000485036 KRTAP19-4Q3LI73 84 aa8.95□□□□□ -0.98
TNFRSF25-215ENST00000485036 SYNE2Q8WXH0 6885 aaKnown RBP8.95□□□□□ -0.98
TNFRSF25-215ENST00000485036 KRTAP5-9P26371 169 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms