RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 C20orf197Q8N268 126 aa12.48□□□□□ -0.41
GTF3C4-202ENST00000483873 LCE2BO14633 110 aa12.46□□□□□ -0.41
GTF3C4-202ENST00000483873 USH2AO75445 5202 aa12.46□□□□□ -0.42
GTF3C4-202ENST00000483873 LCA10Q71F78 164 aa12.45□□□□□ -0.42
GTF3C4-202ENST00000483873 COX7CP15954 63 aa12.43□□□□□ -0.42
GTF3C4-202ENST00000483873 A8MUN3 132 aa12.39□□□□□ -0.43
GTF3C4-202ENST00000483873 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
GTF3C4-202ENST00000483873 SSPOA2VEC9 5147 aa12.36□□□□□ -0.43
GTF3C4-202ENST00000483873 CSAG1Q6PB30 78 aa12.33□□□□□ -0.44
GTF3C4-202ENST00000483873 DMAC1Q96GE9 116 aa12.32□□□□□ -0.44
GTF3C4-202ENST00000483873 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
GTF3C4-202ENST00000483873 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.22□□□□□ -0.45
GTF3C4-202ENST00000483873 CYSTM1Q9H1C7 97 aa12.2□□□□□ -0.46
GTF3C4-202ENST00000483873 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
GTF3C4-202ENST00000483873 NDUFC1O43677 76 aa12.13□□□□□ -0.47
GTF3C4-202ENST00000483873 CCDC179H3BU77 68 aa12.12□□□□□ -0.47
GTF3C4-202ENST00000483873 KRTAP9-7A8MTY7 169 aa12.11□□□□□ -0.47
GTF3C4-202ENST00000483873 ACYP2P14621 99 aa12.11□□□□□ -0.47
GTF3C4-202ENST00000483873 H7BZZ5 65 aa12.11□□□□□ -0.47
GTF3C4-202ENST00000483873 KRTAP19-1Q8IUB9 90 aa12.11□□□□□ -0.47
GTF3C4-202ENST00000483873 FCGBPQ9Y6R7 5405 aaPredicted RBP12.1□□□□□ -0.47
GTF3C4-202ENST00000483873 KRTAP19-6Q3LI70 58 aa11.94□□□□□ -0.5
GTF3C4-202ENST00000483873 SPRR2GQ9BYE4 73 aa11.92□□□□□ -0.5
GTF3C4-202ENST00000483873 CHKB-CPT1BH3BT56 60 aa11.9□□□□□ -0.5
GTF3C4-202ENST00000483873 H0YAA0 97 aa11.88□□□□□ -0.51
GTF3C4-202ENST00000483873 MACF1Q9UPN3 7388 aaKnown RBP11.85□□□□□ -0.51
GTF3C4-202ENST00000483873 COA5Q86WW8 74 aa11.84□□□□□ -0.51
GTF3C4-202ENST00000483873 MT1BP07438 61 aa11.81□□□□□ -0.52
GTF3C4-202ENST00000483873 ADM2Q7Z4H4 148 aa11.81□□□□□ -0.52
GTF3C4-202ENST00000483873 KRTAP19-8Q3LI54 63 aa11.8□□□□□ -0.52
GTF3C4-202ENST00000483873 SPTSSBQ8NFR3 76 aa11.8□□□□□ -0.52
GTF3C4-202ENST00000483873 CRIPTQ9P021 101 aa11.78□□□□□ -0.52
GTF3C4-202ENST00000483873 Q5VV11 94 aa11.77□□□□□ -0.53
GTF3C4-202ENST00000483873 SYNE2Q8WXH0 6885 aaKnown RBP11.75□□□□□ -0.53
GTF3C4-202ENST00000483873 ATP5EP56381 51 aaPredicted RBP11.68□□□□□ -0.54
GTF3C4-202ENST00000483873 TMEM258P61165 79 aa11.66□□□□□ -0.54
GTF3C4-202ENST00000483873 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.54
GTF3C4-202ENST00000483873 P0C880 135 aa11.63□□□□□ -0.55
GTF3C4-202ENST00000483873 PCP4P48539 62 aa11.53□□□□□ -0.56
GTF3C4-202ENST00000483873 A6NN06 94 aa11.5□□□□□ -0.57
GTF3C4-202ENST00000483873 R4GN34 69 aa11.45□□□□□ -0.58
GTF3C4-202ENST00000483873 KRTAP10-5P60370 271 aa11.43□□□□□ -0.58
GTF3C4-202ENST00000483873 M0QZ58 72 aa11.41□□□□□ -0.58
GTF3C4-202ENST00000483873 KRTAP6-3Q3LI67 103 aa11.36□□□□□ -0.59
GTF3C4-202ENST00000483873 SEC61GP60059 68 aa11.3□□□□□ -0.6
GTF3C4-202ENST00000483873 SERP1Q9Y6X1 66 aa11.29□□□□□ -0.6
GTF3C4-202ENST00000483873 LINC01554Q52M75 96 aa11.24□□□□□ -0.61
GTF3C4-202ENST00000483873 PLAC4Q8WY50 150 aa11.23□□□□□ -0.61
GTF3C4-202ENST00000483873 A0A1B0GU69 56 aa11.19□□□□□ -0.62
GTF3C4-202ENST00000483873 KRTAP13-4Q3LI77 160 aa11.18□□□□□ -0.62
GTF3C4-202ENST00000483873 MT1XP80297 61 aa11.14□□□□□ -0.63
GTF3C4-202ENST00000483873 LINC01558Q9Y6Z2 57 aa11.13□□□□□ -0.63
GTF3C4-202ENST00000483873 A0A1B0GU33 70 aa11.09□□□□□ -0.63
GTF3C4-202ENST00000483873 PRO2289Q9P1D8 64 aa11.07□□□□□ -0.64
GTF3C4-202ENST00000483873 NEBP20929 6669 aa11.03□□□□□ -0.64
GTF3C4-202ENST00000483873 PRR15LQ9BU68 103 aa11.01□□□□□ -0.65
GTF3C4-202ENST00000483873 SPATA8Q6RVD6 105 aa11□□□□□ -0.65
GTF3C4-202ENST00000483873 MUC12Q9UKN1 5478 aa10.95□□□□□ -0.66
GTF3C4-202ENST00000483873 RPS28P62857 69 aaKnown RBP10.9□□□□□ -0.66
GTF3C4-202ENST00000483873 SMIM26A0A096LP01 95 aa10.88□□□□□ -0.67
GTF3C4-202ENST00000483873 A0A0D9SG42 100 aa10.86□□□□□ -0.67
GTF3C4-202ENST00000483873 Q1T7F1 81 aa10.85□□□□□ -0.67
GTF3C4-202ENST00000483873 V9GYY9 64 aa10.84□□□□□ -0.67
GTF3C4-202ENST00000483873 KMT2DO14686 5537 aa10.79□□□□□ -0.68
GTF3C4-202ENST00000483873 KRTAP5-9P26371 169 aa10.78□□□□□ -0.68
GTF3C4-202ENST00000483873 KRTAP12-2P59991 146 aa10.76□□□□□ -0.69
GTF3C4-202ENST00000483873 PSPHP1O15172 72 aa10.75□□□□□ -0.69
GTF3C4-202ENST00000483873 A8MU10 97 aa10.74□□□□□ -0.69
GTF3C4-202ENST00000483873 UQCR11O14957 56 aa10.69□□□□□ -0.7
GTF3C4-202ENST00000483873 KRTAP12-1P59990 96 aa10.67□□□□□ -0.7
GTF3C4-202ENST00000483873 KRTAP10-7P60409 375 aaPredicted RBP10.66□□□□□ -0.7
GTF3C4-202ENST00000483873 SPINT4Q6UDR6 99 aa10.66□□□□□ -0.7
GTF3C4-202ENST00000483873 MDN1Q9NU22 5596 aa10.63□□□□□ -0.71
GTF3C4-202ENST00000483873 KRTAP20-1Q3LI63 56 aa10.61□□□□□ -0.71
GTF3C4-202ENST00000483873 KRTAP4-8A0A0G2JLE6 195 aa10.58□□□□□ -0.72
GTF3C4-202ENST00000483873 CAMK2N1Q7Z7J9 78 aa10.58□□□□□ -0.72
GTF3C4-202ENST00000483873 KRTAP4-8Q9BYQ9 185 aa10.58□□□□□ -0.72
GTF3C4-202ENST00000483873 KRTAP8-1Q8IUC2 63 aa10.58□□□□□ -0.72
GTF3C4-202ENST00000483873 KRTAP10-12P60413 245 aa10.56□□□□□ -0.72
GTF3C4-202ENST00000483873 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
GTF3C4-202ENST00000483873 SPRR2FQ96RM1 72 aa10.52□□□□□ -0.73
GTF3C4-202ENST00000483873 A6NED7 52 aa10.4□□□□□ -0.75
GTF3C4-202ENST00000483873 SPRR2EP22531 72 aa10.32□□□□□ -0.76
GTF3C4-202ENST00000483873 SPRR2BP35325 72 aa10.32□□□□□ -0.76
GTF3C4-202ENST00000483873 SPRR2AP35326 72 aa10.32□□□□□ -0.76
GTF3C4-202ENST00000483873 KRTAP2-3P0C7H8 128 aa10.28□□□□□ -0.76
GTF3C4-202ENST00000483873 KRTAP2-4Q9BYR9 128 aa10.28□□□□□ -0.76
GTF3C4-202ENST00000483873 LCE1AQ5T7P2 110 aa10.21□□□□□ -0.78
GTF3C4-202ENST00000483873 C10orf95Q9H7T3 257 aa10.16□□□□□ -0.78
GTF3C4-202ENST00000483873 K7ERS5 55 aa10.14□□□□□ -0.79
GTF3C4-202ENST00000483873 CDC42SE1Q9NRR8 79 aa10.1□□□□□ -0.79
GTF3C4-202ENST00000483873 SPRR2DP22532 72 aa9.98□□□□□ -0.81
GTF3C4-202ENST00000483873 KRTAP19-7Q3SYF9 63 aa9.96□□□□□ -0.82
GTF3C4-202ENST00000483873 KRTAP2-2Q9BYT5 123 aa9.95□□□□□ -0.82
GTF3C4-202ENST00000483873 KRTAP2-1Q9BYU5 128 aa9.95□□□□□ -0.82
GTF3C4-202ENST00000483873 TNP1P09430 55 aa9.93□□□□□ -0.82
GTF3C4-202ENST00000483873 MT1EP04732 61 aa9.84□□□□□ -0.83
GTF3C4-202ENST00000483873 KRTAP19-5Q3LI72 72 aa9.79□□□□□ -0.84
GTF3C4-202ENST00000483873 LCE3AQ5TA76 89 aa9.74□□□□□ -0.85
GTF3C4-202ENST00000483873 BRK1Q8WUW1 75 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms