RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 LRP2P98164 4655 aa8.21□□□□□ -1.1
RXRA-202ENST00000481739 A6NED7 52 aa8.2□□□□□ -1.1
RXRA-202ENST00000481739 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
RXRA-202ENST00000481739 CDC42SE1Q9NRR8 79 aa8.13□□□□□ -1.11
RXRA-202ENST00000481739 SEC61GP60059 68 aa8.13□□□□□ -1.11
RXRA-202ENST00000481739 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
RXRA-202ENST00000481739 LCA10Q71F78 164 aa8.06□□□□□ -1.12
RXRA-202ENST00000481739 UQCR11O14957 56 aa8.04□□□□□ -1.12
RXRA-202ENST00000481739 MUC17Q685J3 4493 aa8.03□□□□□ -1.12
RXRA-202ENST00000481739 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
RXRA-202ENST00000481739 A8MU10 97 aa7.97□□□□□ -1.13
RXRA-202ENST00000481739 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
RXRA-202ENST00000481739 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
RXRA-202ENST00000481739 S4R3F8 94 aa7.97□□□□□ -1.13
RXRA-202ENST00000481739 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
RXRA-202ENST00000481739 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
RXRA-202ENST00000481739 KRTAP4-1Q9BYQ7 146 aa7.9□□□□□ -1.14
RXRA-202ENST00000481739 PMAIP1Q13794 54 aa7.89□□□□□ -1.15
RXRA-202ENST00000481739 A0A1B0GU33 70 aa7.87□□□□□ -1.15
RXRA-202ENST00000481739 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
RXRA-202ENST00000481739 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
RXRA-202ENST00000481739 MUC2Q02817 5179 aa7.81□□□□□ -1.16
RXRA-202ENST00000481739 A6NN06 94 aa7.79□□□□□ -1.16
RXRA-202ENST00000481739 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
RXRA-202ENST00000481739 H0YAA0 97 aa7.75□□□□□ -1.17
RXRA-202ENST00000481739 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
RXRA-202ENST00000481739 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
RXRA-202ENST00000481739 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
RXRA-202ENST00000481739 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
RXRA-202ENST00000481739 KRTAP19-2Q3LHN2 52 aa7.62□□□□□ -1.19
RXRA-202ENST00000481739 K7ERS5 55 aa7.6□□□□□ -1.19
RXRA-202ENST00000481739 P0C880 135 aa7.6□□□□□ -1.19
RXRA-202ENST00000481739 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
RXRA-202ENST00000481739 M0QZ58 72 aa7.55□□□□□ -1.2
RXRA-202ENST00000481739 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
RXRA-202ENST00000481739 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
RXRA-202ENST00000481739 FAT4Q6V0I7 4981 aa7.48□□□□□ -1.21
RXRA-202ENST00000481739 A0A0D9SG42 100 aa7.43□□□□□ -1.22
RXRA-202ENST00000481739 M0R2T5 61 aa7.4□□□□□ -1.23
RXRA-202ENST00000481739 MT1HP80294 61 aa7.38□□□□□ -1.23
RXRA-202ENST00000481739 R4GN34 69 aa7.38□□□□□ -1.23
RXRA-202ENST00000481739 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
RXRA-202ENST00000481739 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
RXRA-202ENST00000481739 ROMO1P60602 79 aa7.28□□□□□ -1.24
RXRA-202ENST00000481739 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
RXRA-202ENST00000481739 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
RXRA-202ENST00000481739 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
RXRA-202ENST00000481739 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
RXRA-202ENST00000481739 LINC01554Q52M75 96 aa7.2□□□□□ -1.26
RXRA-202ENST00000481739 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
RXRA-202ENST00000481739 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
RXRA-202ENST00000481739 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
RXRA-202ENST00000481739 MT2AP02795 61 aa7.08□□□□□ -1.28
RXRA-202ENST00000481739 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
RXRA-202ENST00000481739 MT1FP04733 61 aa7.04□□□□□ -1.28
RXRA-202ENST00000481739 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
RXRA-202ENST00000481739 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
RXRA-202ENST00000481739 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
RXRA-202ENST00000481739 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
RXRA-202ENST00000481739 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
RXRA-202ENST00000481739 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
RXRA-202ENST00000481739 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
RXRA-202ENST00000481739 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
RXRA-202ENST00000481739 H3BS24 57 aa6.7□□□□□ -1.34
RXRA-202ENST00000481739 TNP1P09430 55 aa6.68□□□□□ -1.34
RXRA-202ENST00000481739 LCE2BO14633 110 aa6.67□□□□□ -1.34
RXRA-202ENST00000481739 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
RXRA-202ENST00000481739 MT1BP07438 61 aa6.62□□□□□ -1.35
RXRA-202ENST00000481739 USH2AO75445 5202 aa6.61□□□□□ -1.35
RXRA-202ENST00000481739 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
RXRA-202ENST00000481739 MT1XP80297 61 aa6.43□□□□□ -1.38
RXRA-202ENST00000481739 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
RXRA-202ENST00000481739 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
RXRA-202ENST00000481739 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
RXRA-202ENST00000481739 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
RXRA-202ENST00000481739 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
RXRA-202ENST00000481739 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
RXRA-202ENST00000481739 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
RXRA-202ENST00000481739 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
RXRA-202ENST00000481739 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
RXRA-202ENST00000481739 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
RXRA-202ENST00000481739 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
RXRA-202ENST00000481739 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
RXRA-202ENST00000481739 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
RXRA-202ENST00000481739 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
RXRA-202ENST00000481739 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
RXRA-202ENST00000481739 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
RXRA-202ENST00000481739 KMT2DO14686 5537 aa6.01□□□□□ -1.45
RXRA-202ENST00000481739 LUZP6Q538Z0 58 aa6□□□□□ -1.45
RXRA-202ENST00000481739 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
RXRA-202ENST00000481739 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
RXRA-202ENST00000481739 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
RXRA-202ENST00000481739 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
RXRA-202ENST00000481739 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
RXRA-202ENST00000481739 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
RXRA-202ENST00000481739 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
RXRA-202ENST00000481739 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
RXRA-202ENST00000481739 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
RXRA-202ENST00000481739 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
RXRA-202ENST00000481739 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms