RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SPINK7P58062 85 aa5.83□□□□□ -1.48
VTI1A-204ENST00000480057 A8MUN3 132 aa5.82□□□□□ -1.48
VTI1A-204ENST00000480057 COA5Q86WW8 74 aa5.81□□□□□ -1.48
VTI1A-204ENST00000480057 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
VTI1A-204ENST00000480057 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
VTI1A-204ENST00000480057 V9GYY9 64 aa5.74□□□□□ -1.49
VTI1A-204ENST00000480057 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
VTI1A-204ENST00000480057 COX6B2Q6YFQ2 88 aa5.73□□□□□ -1.49
VTI1A-204ENST00000480057 CHKB-CPT1BH3BT56 60 aa5.72□□□□□ -1.49
VTI1A-204ENST00000480057 Q1T7F1 81 aa5.72□□□□□ -1.49
VTI1A-204ENST00000480057 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
VTI1A-204ENST00000480057 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
VTI1A-204ENST00000480057 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
VTI1A-204ENST00000480057 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
VTI1A-204ENST00000480057 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
VTI1A-204ENST00000480057 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
VTI1A-204ENST00000480057 LRP2P98164 4655 aa5.62□□□□□ -1.51
VTI1A-204ENST00000480057 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
VTI1A-204ENST00000480057 LPAP08519 4548 aa5.6□□□□□ -1.51
VTI1A-204ENST00000480057 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
VTI1A-204ENST00000480057 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
VTI1A-204ENST00000480057 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
VTI1A-204ENST00000480057 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
VTI1A-204ENST00000480057 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
VTI1A-204ENST00000480057 HERC1Q15751 4861 aa5.54□□□□□ -1.52
VTI1A-204ENST00000480057 PSPHP1O15172 72 aa5.53□□□□□ -1.52
VTI1A-204ENST00000480057 Q5VV11 94 aa5.53□□□□□ -1.52
VTI1A-204ENST00000480057 S4R3F8 94 aa5.52□□□□□ -1.53
VTI1A-204ENST00000480057 A0A1B0GU69 56 aa5.51□□□□□ -1.53
VTI1A-204ENST00000480057 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
VTI1A-204ENST00000480057 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
VTI1A-204ENST00000480057 LCA10Q71F78 164 aa5.49□□□□□ -1.53
VTI1A-204ENST00000480057 SEC61GP60059 68 aa5.48□□□□□ -1.53
VTI1A-204ENST00000480057 KRTAP19-2Q3LHN2 52 aa5.41□□□□□ -1.54
VTI1A-204ENST00000480057 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
VTI1A-204ENST00000480057 A6NED7 52 aa5.4□□□□□ -1.54
VTI1A-204ENST00000480057 UQCR11O14957 56 aa5.37□□□□□ -1.55
VTI1A-204ENST00000480057 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
VTI1A-204ENST00000480057 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
VTI1A-204ENST00000480057 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
VTI1A-204ENST00000480057 H0YAA0 97 aa5.35□□□□□ -1.55
VTI1A-204ENST00000480057 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
VTI1A-204ENST00000480057 A0A1B0GU33 70 aa5.32□□□□□ -1.56
VTI1A-204ENST00000480057 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
VTI1A-204ENST00000480057 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
VTI1A-204ENST00000480057 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
VTI1A-204ENST00000480057 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
VTI1A-204ENST00000480057 ADM2Q7Z4H4 148 aa5.26□□□□□ -1.57
VTI1A-204ENST00000480057 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
VTI1A-204ENST00000480057 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
VTI1A-204ENST00000480057 P0C880 135 aa5.22□□□□□ -1.57
VTI1A-204ENST00000480057 A8MU10 97 aa5.21□□□□□ -1.58
VTI1A-204ENST00000480057 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
VTI1A-204ENST00000480057 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
VTI1A-204ENST00000480057 M0QZ58 72 aa5.19□□□□□ -1.58
VTI1A-204ENST00000480057 MUC2Q02817 5179 aa5.18□□□□□ -1.58
VTI1A-204ENST00000480057 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
VTI1A-204ENST00000480057 MT1HP80294 61 aa5.14□□□□□ -1.59
VTI1A-204ENST00000480057 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
VTI1A-204ENST00000480057 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
VTI1A-204ENST00000480057 CRIPTQ9P021 101 aa5.11□□□□□ -1.59
VTI1A-204ENST00000480057 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
VTI1A-204ENST00000480057 R4GN34 69 aa5.09□□□□□ -1.59
VTI1A-204ENST00000480057 A6NN06 94 aa5.08□□□□□ -1.6
VTI1A-204ENST00000480057 K7ERS5 55 aa5.08□□□□□ -1.6
VTI1A-204ENST00000480057 M0R2T5 61 aa5.08□□□□□ -1.6
VTI1A-204ENST00000480057 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
VTI1A-204ENST00000480057 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
VTI1A-204ENST00000480057 A0A0D9SG42 100 aa5.03□□□□□ -1.6
VTI1A-204ENST00000480057 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
VTI1A-204ENST00000480057 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
VTI1A-204ENST00000480057 MT2AP02795 61 aa4.95□□□□□ -1.62
VTI1A-204ENST00000480057 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
VTI1A-204ENST00000480057 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
VTI1A-204ENST00000480057 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
VTI1A-204ENST00000480057 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
VTI1A-204ENST00000480057 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
VTI1A-204ENST00000480057 MT1FP04733 61 aa4.91□□□□□ -1.62
VTI1A-204ENST00000480057 KRTAP10-10P60014 251 aa4.9□□□□□ -1.63
VTI1A-204ENST00000480057 ROMO1P60602 79 aa4.86□□□□□ -1.63
VTI1A-204ENST00000480057 H3BS24 57 aa4.82□□□□□ -1.64
VTI1A-204ENST00000480057 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
VTI1A-204ENST00000480057 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
VTI1A-204ENST00000480057 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
VTI1A-204ENST00000480057 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
VTI1A-204ENST00000480057 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
VTI1A-204ENST00000480057 MT1BP07438 61 aa4.69□□□□□ -1.66
VTI1A-204ENST00000480057 KRTAP25-1Q3LHN0 102 aa4.67□□□□□ -1.66
VTI1A-204ENST00000480057 TNP1P09430 55 aa4.58□□□□□ -1.68
VTI1A-204ENST00000480057 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
VTI1A-204ENST00000480057 MT1XP80297 61 aa4.55□□□□□ -1.68
VTI1A-204ENST00000480057 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
VTI1A-204ENST00000480057 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
VTI1A-204ENST00000480057 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
VTI1A-204ENST00000480057 USH2AO75445 5202 aa4.44□□□□□ -1.7
VTI1A-204ENST00000480057 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
VTI1A-204ENST00000480057 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
VTI1A-204ENST00000480057 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
VTI1A-204ENST00000480057 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
VTI1A-204ENST00000480057 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms