RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC12-219ENST00000479955 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
TRAPPC12-219ENST00000479955 H7BZZ5 65 aa5.7□□□□□ -1.5
TRAPPC12-219ENST00000479955 CSAG1Q6PB30 78 aa5.7□□□□□ -1.5
TRAPPC12-219ENST00000479955 LCA10Q71F78 164 aa5.69□□□□□ -1.5
TRAPPC12-219ENST00000479955 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC12-219ENST00000479955 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
TRAPPC12-219ENST00000479955 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC12-219ENST00000479955 CHKB-CPT1BH3BT56 60 aa5.63□□□□□ -1.51
TRAPPC12-219ENST00000479955 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
TRAPPC12-219ENST00000479955 ATP5EP56381 51 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC12-219ENST00000479955 TMEM258P61165 79 aa5.58□□□□□ -1.52
TRAPPC12-219ENST00000479955 PCP4P48539 62 aa5.57□□□□□ -1.52
TRAPPC12-219ENST00000479955 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
TRAPPC12-219ENST00000479955 COA5Q86WW8 74 aa5.55□□□□□ -1.52
TRAPPC12-219ENST00000479955 H0YAA0 97 aa5.52□□□□□ -1.53
TRAPPC12-219ENST00000479955 MT2AP02795 61 aa5.52□□□□□ -1.53
TRAPPC12-219ENST00000479955 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
TRAPPC12-219ENST00000479955 MT1FP04733 61 aa5.47□□□□□ -1.53
TRAPPC12-219ENST00000479955 ADM2Q7Z4H4 148 aa5.45□□□□□ -1.54
TRAPPC12-219ENST00000479955 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
TRAPPC12-219ENST00000479955 SEC61GP60059 68 aa5.4□□□□□ -1.54
TRAPPC12-219ENST00000479955 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
TRAPPC12-219ENST00000479955 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
TRAPPC12-219ENST00000479955 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
TRAPPC12-219ENST00000479955 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
TRAPPC12-219ENST00000479955 P0C880 135 aa5.33□□□□□ -1.56
TRAPPC12-219ENST00000479955 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
TRAPPC12-219ENST00000479955 A0A1B0GU69 56 aa5.31□□□□□ -1.56
TRAPPC12-219ENST00000479955 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
TRAPPC12-219ENST00000479955 R4GN34 69 aa5.31□□□□□ -1.56
TRAPPC12-219ENST00000479955 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
TRAPPC12-219ENST00000479955 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
TRAPPC12-219ENST00000479955 M0QZ58 72 aa5.27□□□□□ -1.57
TRAPPC12-219ENST00000479955 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
TRAPPC12-219ENST00000479955 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
TRAPPC12-219ENST00000479955 V9GYY9 64 aa5.26□□□□□ -1.57
TRAPPC12-219ENST00000479955 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
TRAPPC12-219ENST00000479955 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
TRAPPC12-219ENST00000479955 A0A1B0GU33 70 aa5.22□□□□□ -1.57
TRAPPC12-219ENST00000479955 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
TRAPPC12-219ENST00000479955 Q5VV11 94 aa5.21□□□□□ -1.58
TRAPPC12-219ENST00000479955 Q1T7F1 81 aa5.19□□□□□ -1.58
TRAPPC12-219ENST00000479955 LINC01554Q52M75 96 aa5.16□□□□□ -1.58
TRAPPC12-219ENST00000479955 PLAC4Q8WY50 150 aa5.13□□□□□ -1.59
TRAPPC12-219ENST00000479955 USH2AO75445 5202 aa5.11□□□□□ -1.59
TRAPPC12-219ENST00000479955 MT1BP07438 61 aa5.11□□□□□ -1.59
TRAPPC12-219ENST00000479955 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
TRAPPC12-219ENST00000479955 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
TRAPPC12-219ENST00000479955 A6NN06 94 aa5.1□□□□□ -1.59
TRAPPC12-219ENST00000479955 UQCR11O14957 56 aa5.1□□□□□ -1.59
TRAPPC12-219ENST00000479955 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
TRAPPC12-219ENST00000479955 SPATA8Q6RVD6 105 aa5.1□□□□□ -1.59
TRAPPC12-219ENST00000479955 PSPHP1O15172 72 aa5.08□□□□□ -1.6
TRAPPC12-219ENST00000479955 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
TRAPPC12-219ENST00000479955 A0A0D9SG42 100 aa5.03□□□□□ -1.6
TRAPPC12-219ENST00000479955 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
TRAPPC12-219ENST00000479955 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
TRAPPC12-219ENST00000479955 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
TRAPPC12-219ENST00000479955 A6NED7 52 aa4.97□□□□□ -1.61
TRAPPC12-219ENST00000479955 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
TRAPPC12-219ENST00000479955 A8MU10 97 aa4.96□□□□□ -1.62
TRAPPC12-219ENST00000479955 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
TRAPPC12-219ENST00000479955 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
TRAPPC12-219ENST00000479955 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
TRAPPC12-219ENST00000479955 K7ERS5 55 aa4.9□□□□□ -1.63
TRAPPC12-219ENST00000479955 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
TRAPPC12-219ENST00000479955 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
TRAPPC12-219ENST00000479955 MT1XP80297 61 aa4.89□□□□□ -1.63
TRAPPC12-219ENST00000479955 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC12-219ENST00000479955 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
TRAPPC12-219ENST00000479955 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC12-219ENST00000479955 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
TRAPPC12-219ENST00000479955 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
TRAPPC12-219ENST00000479955 KRTAP10-12P60413 245 aa4.68□□□□□ -1.66
TRAPPC12-219ENST00000479955 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
TRAPPC12-219ENST00000479955 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
TRAPPC12-219ENST00000479955 TNP1P09430 55 aa4.67□□□□□ -1.66
TRAPPC12-219ENST00000479955 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC12-219ENST00000479955 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
TRAPPC12-219ENST00000479955 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
TRAPPC12-219ENST00000479955 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
TRAPPC12-219ENST00000479955 ROMO1P60602 79 aa4.58□□□□□ -1.68
TRAPPC12-219ENST00000479955 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
TRAPPC12-219ENST00000479955 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
TRAPPC12-219ENST00000479955 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
TRAPPC12-219ENST00000479955 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
TRAPPC12-219ENST00000479955 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
TRAPPC12-219ENST00000479955 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
TRAPPC12-219ENST00000479955 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
TRAPPC12-219ENST00000479955 KMT2DO14686 5537 aa4.48□□□□□ -1.69
TRAPPC12-219ENST00000479955 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
TRAPPC12-219ENST00000479955 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
TRAPPC12-219ENST00000479955 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
TRAPPC12-219ENST00000479955 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
TRAPPC12-219ENST00000479955 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
TRAPPC12-219ENST00000479955 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
TRAPPC12-219ENST00000479955 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
TRAPPC12-219ENST00000479955 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
TRAPPC12-219ENST00000479955 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms