RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
HDLBP-238ENST00000479894 MPLKIPQ8TAP9 179 aa7.71□□□□□ -1.18
HDLBP-238ENST00000479894 KRTAP20-1Q3LI63 56 aa7.68□□□□□ -1.18
HDLBP-238ENST00000479894 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
HDLBP-238ENST00000479894 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
HDLBP-238ENST00000479894 CYP4F30PQ9H0H9 118 aa7.67□□□□□ -1.18
HDLBP-238ENST00000479894 LINC00208Q96KT6 92 aa7.64□□□□□ -1.19
HDLBP-238ENST00000479894 MUC12Q9UKN1 5478 aa7.6□□□□□ -1.19
HDLBP-238ENST00000479894 C4orf26Q17RF5 130 aa7.59□□□□□ -1.19
HDLBP-238ENST00000479894 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
HDLBP-238ENST00000479894 SERP2Q8N6R1 65 aa7.57□□□□□ -1.2
HDLBP-238ENST00000479894 A8MUN3 132 aa7.5□□□□□ -1.21
HDLBP-238ENST00000479894 KLKP1Q107X0 134 aa7.46□□□□□ -1.22
HDLBP-238ENST00000479894 COX7CP15954 63 aa7.43□□□□□ -1.22
HDLBP-238ENST00000479894 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
HDLBP-238ENST00000479894 ANAPC13Q9BS18 74 aa7.41□□□□□ -1.22
HDLBP-238ENST00000479894 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
HDLBP-238ENST00000479894 S4R3F8 94 aa7.41□□□□□ -1.22
HDLBP-238ENST00000479894 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
HDLBP-238ENST00000479894 NDUFC1O43677 76 aa7.37□□□□□ -1.23
HDLBP-238ENST00000479894 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
HDLBP-238ENST00000479894 SPANXA2-OT1Q8N9U9 137 aa7.34□□□□□ -1.23
HDLBP-238ENST00000479894 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
HDLBP-238ENST00000479894 KRTAP5-9P26371 169 aa7.33□□□□□ -1.24
HDLBP-238ENST00000479894 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
HDLBP-238ENST00000479894 ACYP2P14621 99 aa7.32□□□□□ -1.24
HDLBP-238ENST00000479894 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
HDLBP-238ENST00000479894 LCA10Q71F78 164 aa7.3□□□□□ -1.24
HDLBP-238ENST00000479894 MDN1Q9NU22 5596 aa7.29□□□□□ -1.24
HDLBP-238ENST00000479894 A6NN06 94 aa7.26□□□□□ -1.25
HDLBP-238ENST00000479894 KMT2DO14686 5537 aa7.26□□□□□ -1.25
HDLBP-238ENST00000479894 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
HDLBP-238ENST00000479894 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
HDLBP-238ENST00000479894 H7BZZ5 65 aa7.18□□□□□ -1.26
HDLBP-238ENST00000479894 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
HDLBP-238ENST00000479894 CCDC179H3BU77 68 aa7.14□□□□□ -1.27
HDLBP-238ENST00000479894 H0YAA0 97 aa7.12□□□□□ -1.27
HDLBP-238ENST00000479894 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
HDLBP-238ENST00000479894 CYSTM1Q9H1C7 97 aa7.07□□□□□ -1.28
HDLBP-238ENST00000479894 MT1BP07438 61 aa7.05□□□□□ -1.28
HDLBP-238ENST00000479894 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
HDLBP-238ENST00000479894 KRTAP2-2Q9BYT5 123 aa7.05□□□□□ -1.28
HDLBP-238ENST00000479894 KRTAP2-1Q9BYU5 128 aa7.05□□□□□ -1.28
HDLBP-238ENST00000479894 COA5Q86WW8 74 aa7.04□□□□□ -1.28
HDLBP-238ENST00000479894 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
HDLBP-238ENST00000479894 TMEM258P61165 79 aa7.03□□□□□ -1.28
HDLBP-238ENST00000479894 Q5VV11 94 aa7.01□□□□□ -1.29
HDLBP-238ENST00000479894 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
HDLBP-238ENST00000479894 SPRR2EP22531 72 aa6.96□□□□□ -1.3
HDLBP-238ENST00000479894 SPRR2BP35325 72 aa6.96□□□□□ -1.3
HDLBP-238ENST00000479894 SPRR2AP35326 72 aa6.96□□□□□ -1.3
HDLBP-238ENST00000479894 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
HDLBP-238ENST00000479894 SEC61GP60059 68 aa6.92□□□□□ -1.3
HDLBP-238ENST00000479894 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
HDLBP-238ENST00000479894 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
HDLBP-238ENST00000479894 PCP4P48539 62 aa6.88□□□□□ -1.31
HDLBP-238ENST00000479894 SERP1Q9Y6X1 66 aa6.87□□□□□ -1.31
HDLBP-238ENST00000479894 R4GN34 69 aa6.85□□□□□ -1.31
HDLBP-238ENST00000479894 P0C880 135 aa6.82□□□□□ -1.32
HDLBP-238ENST00000479894 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
HDLBP-238ENST00000479894 M0QZ58 72 aa6.78□□□□□ -1.32
HDLBP-238ENST00000479894 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
HDLBP-238ENST00000479894 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
HDLBP-238ENST00000479894 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
HDLBP-238ENST00000479894 A0A1B0GU69 56 aa6.74□□□□□ -1.33
HDLBP-238ENST00000479894 SPRR2DP22532 72 aa6.73□□□□□ -1.33
HDLBP-238ENST00000479894 V9GYY9 64 aa6.67□□□□□ -1.34
HDLBP-238ENST00000479894 A0A1B0GU33 70 aa6.66□□□□□ -1.34
HDLBP-238ENST00000479894 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
HDLBP-238ENST00000479894 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
HDLBP-238ENST00000479894 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
HDLBP-238ENST00000479894 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
HDLBP-238ENST00000479894 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
HDLBP-238ENST00000479894 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
HDLBP-238ENST00000479894 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
HDLBP-238ENST00000479894 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
HDLBP-238ENST00000479894 Q1T7F1 81 aa6.53□□□□□ -1.36
HDLBP-238ENST00000479894 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
HDLBP-238ENST00000479894 UQCR11O14957 56 aa6.48□□□□□ -1.37
HDLBP-238ENST00000479894 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
HDLBP-238ENST00000479894 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
HDLBP-238ENST00000479894 A0A0D9SG42 100 aa6.43□□□□□ -1.38
HDLBP-238ENST00000479894 MT1XP80297 61 aa6.43□□□□□ -1.38
HDLBP-238ENST00000479894 PSPHP1O15172 72 aa6.39□□□□□ -1.39
HDLBP-238ENST00000479894 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
HDLBP-238ENST00000479894 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
HDLBP-238ENST00000479894 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
HDLBP-238ENST00000479894 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
HDLBP-238ENST00000479894 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
HDLBP-238ENST00000479894 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
HDLBP-238ENST00000479894 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
HDLBP-238ENST00000479894 A8MU10 97 aa6.29□□□□□ -1.4
HDLBP-238ENST00000479894 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
HDLBP-238ENST00000479894 A6NED7 52 aa6.27□□□□□ -1.41
HDLBP-238ENST00000479894 K7ERS5 55 aa6.27□□□□□ -1.41
HDLBP-238ENST00000479894 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
HDLBP-238ENST00000479894 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-238ENST00000479894 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
HDLBP-238ENST00000479894 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
HDLBP-238ENST00000479894 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms