RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
TRIM8-203ENST00000479004 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
TRIM8-203ENST00000479004 KRTAP9-7A8MTY7 169 aa9.73□□□□□ -0.85
TRIM8-203ENST00000479004 KLKP1Q107X0 134 aa9.65□□□□□ -0.86
TRIM8-203ENST00000479004 KRTAP3-1Q9BYR8 98 aa9.65□□□□□ -0.86
TRIM8-203ENST00000479004 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
TRIM8-203ENST00000479004 MACF1Q9UPN3 7388 aaKnown RBP9.61□□□□□ -0.87
TRIM8-203ENST00000479004 KRTAP19-6Q3LI70 58 aa9.59□□□□□ -0.87
TRIM8-203ENST00000479004 SYNE2Q8WXH0 6885 aaKnown RBP9.55□□□□□ -0.88
TRIM8-203ENST00000479004 A8MUN3 132 aa9.54□□□□□ -0.88
TRIM8-203ENST00000479004 S4R3F8 94 aa9.53□□□□□ -0.88
TRIM8-203ENST00000479004 C20orf197Q8N268 126 aa9.5□□□□□ -0.89
TRIM8-203ENST00000479004 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
TRIM8-203ENST00000479004 COX7CP15954 63 aa9.47□□□□□ -0.89
TRIM8-203ENST00000479004 LCA10Q71F78 164 aa9.45□□□□□ -0.9
TRIM8-203ENST00000479004 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
TRIM8-203ENST00000479004 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
TRIM8-203ENST00000479004 ANAPC13Q9BS18 74 aa9.41□□□□□ -0.9
TRIM8-203ENST00000479004 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
TRIM8-203ENST00000479004 NDUFC1O43677 76 aa9.34□□□□□ -0.91
TRIM8-203ENST00000479004 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
TRIM8-203ENST00000479004 ACYP2P14621 99 aa9.31□□□□□ -0.92
TRIM8-203ENST00000479004 H7BZZ5 65 aa9.19□□□□□ -0.94
TRIM8-203ENST00000479004 SPRR2GQ9BYE4 73 aa9.19□□□□□ -0.94
TRIM8-203ENST00000479004 MT1BP07438 61 aa9.18□□□□□ -0.94
TRIM8-203ENST00000479004 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
TRIM8-203ENST00000479004 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
TRIM8-203ENST00000479004 KRTAP6-3Q3LI67 103 aa9.17□□□□□ -0.94
TRIM8-203ENST00000479004 KRTAP19-8Q3LI54 63 aa9.15□□□□□ -0.94
TRIM8-203ENST00000479004 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
TRIM8-203ENST00000479004 Q5VV11 94 aa9.14□□□□□ -0.95
TRIM8-203ENST00000479004 SPTSSBQ8NFR3 76 aa9.13□□□□□ -0.95
TRIM8-203ENST00000479004 H0YAA0 97 aa9.12□□□□□ -0.95
TRIM8-203ENST00000479004 A6NN06 94 aa9.09□□□□□ -0.95
TRIM8-203ENST00000479004 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
TRIM8-203ENST00000479004 COA5Q86WW8 74 aa9.02□□□□□ -0.97
TRIM8-203ENST00000479004 KRTAP10-5P60370 271 aa8.99□□□□□ -0.97
TRIM8-203ENST00000479004 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
TRIM8-203ENST00000479004 MUC12Q9UKN1 5478 aa8.97□□□□□ -0.97
TRIM8-203ENST00000479004 NEBP20929 6669 aa8.97□□□□□ -0.97
TRIM8-203ENST00000479004 ATP5EP56381 51 aaPredicted RBP8.96□□□□□ -0.98
TRIM8-203ENST00000479004 TMEM258P61165 79 aa8.9□□□□□ -0.98
TRIM8-203ENST00000479004 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
TRIM8-203ENST00000479004 P0C880 135 aa8.86□□□□□ -0.99
TRIM8-203ENST00000479004 R4GN34 69 aa8.76□□□□□ -1.01
TRIM8-203ENST00000479004 KRTAP5-9P26371 169 aa8.72□□□□□ -1.01
TRIM8-203ENST00000479004 SEC61GP60059 68 aa8.72□□□□□ -1.01
TRIM8-203ENST00000479004 M0QZ58 72 aa8.71□□□□□ -1.02
TRIM8-203ENST00000479004 PCP4P48539 62 aa8.71□□□□□ -1.02
TRIM8-203ENST00000479004 MDN1Q9NU22 5596 aa8.7□□□□□ -1.02
TRIM8-203ENST00000479004 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
TRIM8-203ENST00000479004 KMT2DO14686 5537 aa8.69□□□□□ -1.02
TRIM8-203ENST00000479004 MT1XP80297 61 aa8.58□□□□□ -1.04
TRIM8-203ENST00000479004 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
TRIM8-203ENST00000479004 A0A1B0GU69 56 aa8.57□□□□□ -1.04
TRIM8-203ENST00000479004 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
TRIM8-203ENST00000479004 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
TRIM8-203ENST00000479004 KRTAP20-1Q3LI63 56 aa8.52□□□□□ -1.05
TRIM8-203ENST00000479004 A0A1B0GU33 70 aa8.5□□□□□ -1.05
TRIM8-203ENST00000479004 LINC01558Q9Y6Z2 57 aa8.5□□□□□ -1.05
TRIM8-203ENST00000479004 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
TRIM8-203ENST00000479004 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
TRIM8-203ENST00000479004 SPRR2FQ96RM1 72 aa8.41□□□□□ -1.06
TRIM8-203ENST00000479004 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
TRIM8-203ENST00000479004 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
TRIM8-203ENST00000479004 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
TRIM8-203ENST00000479004 V9GYY9 64 aa8.35□□□□□ -1.07
TRIM8-203ENST00000479004 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
TRIM8-203ENST00000479004 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
TRIM8-203ENST00000479004 SPRR2EP22531 72 aa8.31□□□□□ -1.08
TRIM8-203ENST00000479004 SPRR2BP35325 72 aa8.31□□□□□ -1.08
TRIM8-203ENST00000479004 SPRR2AP35326 72 aa8.31□□□□□ -1.08
TRIM8-203ENST00000479004 KRTAP2-3P0C7H8 128 aa8.29□□□□□ -1.08
TRIM8-203ENST00000479004 KRTAP2-4Q9BYR9 128 aa8.29□□□□□ -1.08
TRIM8-203ENST00000479004 A0A0D9SG42 100 aa8.28□□□□□ -1.08
TRIM8-203ENST00000479004 Q1T7F1 81 aa8.28□□□□□ -1.08
TRIM8-203ENST00000479004 KRTAP4-8A0A0G2JLE6 195 aa8.25□□□□□ -1.09
TRIM8-203ENST00000479004 KRTAP4-8Q9BYQ9 185 aa8.25□□□□□ -1.09
TRIM8-203ENST00000479004 LCE1AQ5T7P2 110 aa8.21□□□□□ -1.1
TRIM8-203ENST00000479004 UQCR11O14957 56 aa8.2□□□□□ -1.1
TRIM8-203ENST00000479004 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
TRIM8-203ENST00000479004 PSPHP1O15172 72 aa8.16□□□□□ -1.1
TRIM8-203ENST00000479004 KRTAP10-12P60413 245 aa8.16□□□□□ -1.1
TRIM8-203ENST00000479004 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
TRIM8-203ENST00000479004 A8MU10 97 aa8.15□□□□□ -1.1
TRIM8-203ENST00000479004 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
TRIM8-203ENST00000479004 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
TRIM8-203ENST00000479004 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
TRIM8-203ENST00000479004 SPRR2DP22532 72 aa8.03□□□□□ -1.12
TRIM8-203ENST00000479004 KRTAP2-2Q9BYT5 123 aa8.03□□□□□ -1.12
TRIM8-203ENST00000479004 KRTAP2-1Q9BYU5 128 aa8.03□□□□□ -1.12
TRIM8-203ENST00000479004 A6NED7 52 aa7.94□□□□□ -1.14
TRIM8-203ENST00000479004 K7ERS5 55 aa7.84□□□□□ -1.15
TRIM8-203ENST00000479004 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
TRIM8-203ENST00000479004 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
TRIM8-203ENST00000479004 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
TRIM8-203ENST00000479004 KRTAP19-7Q3SYF9 63 aa7.68□□□□□ -1.18
TRIM8-203ENST00000479004 TNP1P09430 55 aa7.65□□□□□ -1.18
TRIM8-203ENST00000479004 DSTQ03001 7570 aaKnown RBP7.61□□□□□ -1.19
TRIM8-203ENST00000479004 MT1EP04732 61 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms