RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 IGKV2D-30A0A075B6S6 120 aa5.15□□□□□ -1.59
SCAMP3-206ENST00000478737 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
SCAMP3-206ENST00000478737 A8MUN3 132 aa5.13□□□□□ -1.59
SCAMP3-206ENST00000478737 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
SCAMP3-206ENST00000478737 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
SCAMP3-206ENST00000478737 PSPHP1O15172 72 aa5.11□□□□□ -1.59
SCAMP3-206ENST00000478737 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
SCAMP3-206ENST00000478737 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
SCAMP3-206ENST00000478737 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
SCAMP3-206ENST00000478737 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
SCAMP3-206ENST00000478737 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.6
SCAMP3-206ENST00000478737 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
SCAMP3-206ENST00000478737 Q5VV11 94 aa5.08□□□□□ -1.6
SCAMP3-206ENST00000478737 SPINK7P58062 85 aa5.07□□□□□ -1.6
SCAMP3-206ENST00000478737 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
SCAMP3-206ENST00000478737 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
SCAMP3-206ENST00000478737 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
SCAMP3-206ENST00000478737 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
SCAMP3-206ENST00000478737 M0R2T5 61 aa5.02□□□□□ -1.61
SCAMP3-206ENST00000478737 A6NED7 52 aa5.01□□□□□ -1.61
SCAMP3-206ENST00000478737 A0A1B0GU69 56 aa4.98□□□□□ -1.61
SCAMP3-206ENST00000478737 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
SCAMP3-206ENST00000478737 SEC61GP60059 68 aa4.94□□□□□ -1.62
SCAMP3-206ENST00000478737 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
SCAMP3-206ENST00000478737 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
SCAMP3-206ENST00000478737 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
SCAMP3-206ENST00000478737 UQCR11O14957 56 aa4.89□□□□□ -1.63
SCAMP3-206ENST00000478737 LCA10Q71F78 164 aa4.88□□□□□ -1.63
SCAMP3-206ENST00000478737 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
SCAMP3-206ENST00000478737 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
SCAMP3-206ENST00000478737 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
SCAMP3-206ENST00000478737 MT2AP02795 61 aa4.85□□□□□ -1.63
SCAMP3-206ENST00000478737 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
SCAMP3-206ENST00000478737 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
SCAMP3-206ENST00000478737 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
SCAMP3-206ENST00000478737 MT1FP04733 61 aa4.81□□□□□ -1.64
SCAMP3-206ENST00000478737 A8MU10 97 aa4.8□□□□□ -1.64
SCAMP3-206ENST00000478737 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
SCAMP3-206ENST00000478737 S4R3F8 94 aa4.79□□□□□ -1.64
SCAMP3-206ENST00000478737 A6NN06 94 aa4.76□□□□□ -1.65
SCAMP3-206ENST00000478737 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
SCAMP3-206ENST00000478737 A0A1B0GU33 70 aa4.74□□□□□ -1.65
SCAMP3-206ENST00000478737 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
SCAMP3-206ENST00000478737 LCE2BO14633 110 aa4.72□□□□□ -1.65
SCAMP3-206ENST00000478737 USH2AO75445 5202 aa4.71□□□□□ -1.66
SCAMP3-206ENST00000478737 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
SCAMP3-206ENST00000478737 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
SCAMP3-206ENST00000478737 H0YAA0 97 aa4.67□□□□□ -1.66
SCAMP3-206ENST00000478737 K7ERS5 55 aa4.66□□□□□ -1.66
SCAMP3-206ENST00000478737 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
SCAMP3-206ENST00000478737 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
SCAMP3-206ENST00000478737 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
SCAMP3-206ENST00000478737 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
SCAMP3-206ENST00000478737 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
SCAMP3-206ENST00000478737 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
SCAMP3-206ENST00000478737 M0QZ58 72 aa4.54□□□□□ -1.68
SCAMP3-206ENST00000478737 P0C880 135 aa4.53□□□□□ -1.68
SCAMP3-206ENST00000478737 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
SCAMP3-206ENST00000478737 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
SCAMP3-206ENST00000478737 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
SCAMP3-206ENST00000478737 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
SCAMP3-206ENST00000478737 A0A0D9SG42 100 aa4.46□□□□□ -1.7
SCAMP3-206ENST00000478737 CRIPTQ9P021 101 aa4.46□□□□□ -1.7
SCAMP3-206ENST00000478737 MT1BP07438 61 aa4.44□□□□□ -1.7
SCAMP3-206ENST00000478737 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SCAMP3-206ENST00000478737 ROMO1P60602 79 aa4.43□□□□□ -1.7
SCAMP3-206ENST00000478737 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
SCAMP3-206ENST00000478737 R4GN34 69 aa4.42□□□□□ -1.7
SCAMP3-206ENST00000478737 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
SCAMP3-206ENST00000478737 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SCAMP3-206ENST00000478737 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
SCAMP3-206ENST00000478737 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
SCAMP3-206ENST00000478737 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
SCAMP3-206ENST00000478737 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
SCAMP3-206ENST00000478737 LINC01554Q52M75 96 aa4.33□□□□□ -1.72
SCAMP3-206ENST00000478737 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
SCAMP3-206ENST00000478737 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
SCAMP3-206ENST00000478737 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
SCAMP3-206ENST00000478737 MT1XP80297 61 aa4.19□□□□□ -1.74
SCAMP3-206ENST00000478737 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
SCAMP3-206ENST00000478737 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
SCAMP3-206ENST00000478737 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
SCAMP3-206ENST00000478737 NEBP20929 6669 aa4.12□□□□□ -1.75
SCAMP3-206ENST00000478737 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
SCAMP3-206ENST00000478737 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SCAMP3-206ENST00000478737 KMT2DO14686 5537 aa4.05□□□□□ -1.76
SCAMP3-206ENST00000478737 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
SCAMP3-206ENST00000478737 TNP1P09430 55 aa4.02□□□□□ -1.77
SCAMP3-206ENST00000478737 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
SCAMP3-206ENST00000478737 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
SCAMP3-206ENST00000478737 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
SCAMP3-206ENST00000478737 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
SCAMP3-206ENST00000478737 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
SCAMP3-206ENST00000478737 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
SCAMP3-206ENST00000478737 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
SCAMP3-206ENST00000478737 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
SCAMP3-206ENST00000478737 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
SCAMP3-206ENST00000478737 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
SCAMP3-206ENST00000478737 SPRR2EP22531 72 aa3.87□□□□□ -1.79
SCAMP3-206ENST00000478737 SPRR2BP35325 72 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms