RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 A6NED7 52 aa5.94□□□□□ -1.46
HLA-DMB-260ENST00000477537 A8MU10 97 aa5.92□□□□□ -1.46
HLA-DMB-260ENST00000477537 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.46
HLA-DMB-260ENST00000477537 SPINK7P58062 85 aa5.89□□□□□ -1.47
HLA-DMB-260ENST00000477537 LCA10Q71F78 164 aa5.89□□□□□ -1.47
HLA-DMB-260ENST00000477537 A0A1B0GU69 56 aa5.86□□□□□ -1.47
HLA-DMB-260ENST00000477537 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
HLA-DMB-260ENST00000477537 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
HLA-DMB-260ENST00000477537 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
HLA-DMB-260ENST00000477537 HERC1Q15751 4861 aa5.86□□□□□ -1.47
HLA-DMB-260ENST00000477537 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
HLA-DMB-260ENST00000477537 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
HLA-DMB-260ENST00000477537 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
HLA-DMB-260ENST00000477537 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
HLA-DMB-260ENST00000477537 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
HLA-DMB-260ENST00000477537 COX6B2Q6YFQ2 88 aa5.78□□□□□ -1.48
HLA-DMB-260ENST00000477537 A6NN06 94 aa5.77□□□□□ -1.49
HLA-DMB-260ENST00000477537 RBM12B-AS1Q9P1G2 102 aa5.76□□□□□ -1.49
HLA-DMB-260ENST00000477537 LPAP08519 4548 aa5.73□□□□□ -1.49
HLA-DMB-260ENST00000477537 UQCR11O14957 56 aa5.72□□□□□ -1.49
HLA-DMB-260ENST00000477537 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
HLA-DMB-260ENST00000477537 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
HLA-DMB-260ENST00000477537 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
HLA-DMB-260ENST00000477537 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
HLA-DMB-260ENST00000477537 TPRXLQ17RH7 258 aa5.65□□□□□ -1.51
HLA-DMB-260ENST00000477537 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
HLA-DMB-260ENST00000477537 LRP2P98164 4655 aa5.64□□□□□ -1.51
HLA-DMB-260ENST00000477537 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
HLA-DMB-260ENST00000477537 A0A1B0GU33 70 aa5.6□□□□□ -1.51
HLA-DMB-260ENST00000477537 S4R3F8 94 aa5.59□□□□□ -1.51
HLA-DMB-260ENST00000477537 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
HLA-DMB-260ENST00000477537 H0YAA0 97 aa5.57□□□□□ -1.52
HLA-DMB-260ENST00000477537 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
HLA-DMB-260ENST00000477537 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
HLA-DMB-260ENST00000477537 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
HLA-DMB-260ENST00000477537 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
HLA-DMB-260ENST00000477537 MUC2Q02817 5179 aa5.46□□□□□ -1.54
HLA-DMB-260ENST00000477537 SEC61BP60468 96 aaKnown RBP5.46□□□□□ -1.54
HLA-DMB-260ENST00000477537 LINC01554Q52M75 96 aa5.44□□□□□ -1.54
HLA-DMB-260ENST00000477537 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
HLA-DMB-260ENST00000477537 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
HLA-DMB-260ENST00000477537 P0C880 135 aa5.42□□□□□ -1.54
HLA-DMB-260ENST00000477537 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
HLA-DMB-260ENST00000477537 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
HLA-DMB-260ENST00000477537 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
HLA-DMB-260ENST00000477537 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
HLA-DMB-260ENST00000477537 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
HLA-DMB-260ENST00000477537 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
HLA-DMB-260ENST00000477537 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
HLA-DMB-260ENST00000477537 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
HLA-DMB-260ENST00000477537 A0A0D9SG42 100 aa5.36□□□□□ -1.55
HLA-DMB-260ENST00000477537 K7ERS5 55 aa5.36□□□□□ -1.55
HLA-DMB-260ENST00000477537 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
HLA-DMB-260ENST00000477537 H3BS24 57 aa5.28□□□□□ -1.56
HLA-DMB-260ENST00000477537 M0QZ58 72 aa5.25□□□□□ -1.57
HLA-DMB-260ENST00000477537 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
HLA-DMB-260ENST00000477537 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
HLA-DMB-260ENST00000477537 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
HLA-DMB-260ENST00000477537 ROMO1P60602 79 aa5.21□□□□□ -1.57
HLA-DMB-260ENST00000477537 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
HLA-DMB-260ENST00000477537 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
HLA-DMB-260ENST00000477537 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
HLA-DMB-260ENST00000477537 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
HLA-DMB-260ENST00000477537 R4GN34 69 aa5.16□□□□□ -1.58
HLA-DMB-260ENST00000477537 CRIPTQ9P021 101 aa5.15□□□□□ -1.58
HLA-DMB-260ENST00000477537 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
HLA-DMB-260ENST00000477537 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
HLA-DMB-260ENST00000477537 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
HLA-DMB-260ENST00000477537 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
HLA-DMB-260ENST00000477537 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
HLA-DMB-260ENST00000477537 MT1HP80294 61 aa4.95□□□□□ -1.62
HLA-DMB-260ENST00000477537 M0R2T5 61 aa4.9□□□□□ -1.62
HLA-DMB-260ENST00000477537 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.62
HLA-DMB-260ENST00000477537 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
HLA-DMB-260ENST00000477537 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
HLA-DMB-260ENST00000477537 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
HLA-DMB-260ENST00000477537 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
HLA-DMB-260ENST00000477537 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
HLA-DMB-260ENST00000477537 MT2AP02795 61 aa4.77□□□□□ -1.65
HLA-DMB-260ENST00000477537 MT1FP04733 61 aa4.76□□□□□ -1.65
HLA-DMB-260ENST00000477537 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
HLA-DMB-260ENST00000477537 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
HLA-DMB-260ENST00000477537 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
HLA-DMB-260ENST00000477537 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
HLA-DMB-260ENST00000477537 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
HLA-DMB-260ENST00000477537 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
HLA-DMB-260ENST00000477537 TNP1P09430 55 aa4.68□□□□□ -1.66
HLA-DMB-260ENST00000477537 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
HLA-DMB-260ENST00000477537 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
HLA-DMB-260ENST00000477537 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
HLA-DMB-260ENST00000477537 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.68
HLA-DMB-260ENST00000477537 USH2AO75445 5202 aa4.58□□□□□ -1.68
HLA-DMB-260ENST00000477537 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
HLA-DMB-260ENST00000477537 MT1BP07438 61 aa4.56□□□□□ -1.68
HLA-DMB-260ENST00000477537 MT1XP80297 61 aa4.49□□□□□ -1.69
HLA-DMB-260ENST00000477537 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
HLA-DMB-260ENST00000477537 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
HLA-DMB-260ENST00000477537 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
HLA-DMB-260ENST00000477537 A0A0A0MQY5 61 aa4.4□□□□□ -1.7
HLA-DMB-260ENST00000477537 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms