RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
MRPL55-227ENST00000475832 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
MRPL55-227ENST00000475832 CHKB-CPT1BH3BT56 60 aa6.28□□□□□ -1.4
MRPL55-227ENST00000475832 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
MRPL55-227ENST00000475832 COA5Q86WW8 74 aa6.25□□□□□ -1.41
MRPL55-227ENST00000475832 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
MRPL55-227ENST00000475832 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.42
MRPL55-227ENST00000475832 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
MRPL55-227ENST00000475832 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
MRPL55-227ENST00000475832 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
MRPL55-227ENST00000475832 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
MRPL55-227ENST00000475832 SMIM26A0A096LP01 95 aa6.15□□□□□ -1.42
MRPL55-227ENST00000475832 S4R3F8 94 aa6.14□□□□□ -1.43
MRPL55-227ENST00000475832 V9GYY9 64 aa6.1□□□□□ -1.43
MRPL55-227ENST00000475832 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.43
MRPL55-227ENST00000475832 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
MRPL55-227ENST00000475832 LCA10Q71F78 164 aa6.06□□□□□ -1.44
MRPL55-227ENST00000475832 SEC61GP60059 68 aa6.03□□□□□ -1.44
MRPL55-227ENST00000475832 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
MRPL55-227ENST00000475832 Q1T7F1 81 aa6.02□□□□□ -1.45
MRPL55-227ENST00000475832 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
MRPL55-227ENST00000475832 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
MRPL55-227ENST00000475832 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
MRPL55-227ENST00000475832 A0A1B0GU69 56 aa5.97□□□□□ -1.45
MRPL55-227ENST00000475832 MT1HP80294 61 aa5.97□□□□□ -1.45
MRPL55-227ENST00000475832 M0R2T5 61 aa5.9□□□□□ -1.46
MRPL55-227ENST00000475832 PSPHP1O15172 72 aa5.9□□□□□ -1.46
MRPL55-227ENST00000475832 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
MRPL55-227ENST00000475832 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
MRPL55-227ENST00000475832 H0YAA0 97 aa5.86□□□□□ -1.47
MRPL55-227ENST00000475832 LCE2BO14633 110 aa5.83□□□□□ -1.48
MRPL55-227ENST00000475832 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
MRPL55-227ENST00000475832 Q5VV11 94 aa5.82□□□□□ -1.48
MRPL55-227ENST00000475832 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
MRPL55-227ENST00000475832 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
MRPL55-227ENST00000475832 USH2AO75445 5202 aa5.79□□□□□ -1.48
MRPL55-227ENST00000475832 A0A1B0GU33 70 aa5.79□□□□□ -1.48
MRPL55-227ENST00000475832 A6NED7 52 aa5.78□□□□□ -1.48
MRPL55-227ENST00000475832 UQCR11O14957 56 aa5.78□□□□□ -1.48
MRPL55-227ENST00000475832 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
MRPL55-227ENST00000475832 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
MRPL55-227ENST00000475832 P0C880 135 aa5.72□□□□□ -1.49
MRPL55-227ENST00000475832 M0QZ58 72 aa5.69□□□□□ -1.5
MRPL55-227ENST00000475832 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
MRPL55-227ENST00000475832 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
MRPL55-227ENST00000475832 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
MRPL55-227ENST00000475832 R4GN34 69 aa5.68□□□□□ -1.5
MRPL55-227ENST00000475832 BRK1Q8WUW1 75 aa5.65□□□□□ -1.5
MRPL55-227ENST00000475832 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
MRPL55-227ENST00000475832 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
MRPL55-227ENST00000475832 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
MRPL55-227ENST00000475832 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
MRPL55-227ENST00000475832 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
MRPL55-227ENST00000475832 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
MRPL55-227ENST00000475832 MT2AP02795 61 aa5.59□□□□□ -1.51
MRPL55-227ENST00000475832 K7ERS5 55 aa5.56□□□□□ -1.52
MRPL55-227ENST00000475832 A0A0D9SG42 100 aa5.55□□□□□ -1.52
MRPL55-227ENST00000475832 MT1FP04733 61 aa5.55□□□□□ -1.52
MRPL55-227ENST00000475832 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
MRPL55-227ENST00000475832 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
MRPL55-227ENST00000475832 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
MRPL55-227ENST00000475832 A8MU10 97 aa5.52□□□□□ -1.53
MRPL55-227ENST00000475832 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
MRPL55-227ENST00000475832 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
MRPL55-227ENST00000475832 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
MRPL55-227ENST00000475832 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
MRPL55-227ENST00000475832 NEBP20929 6669 aa5.47□□□□□ -1.53
MRPL55-227ENST00000475832 A6NN06 94 aa5.46□□□□□ -1.54
MRPL55-227ENST00000475832 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
MRPL55-227ENST00000475832 KRTAP12-1P59990 96 aa5.39□□□□□ -1.55
MRPL55-227ENST00000475832 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
MRPL55-227ENST00000475832 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
MRPL55-227ENST00000475832 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
MRPL55-227ENST00000475832 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
MRPL55-227ENST00000475832 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
MRPL55-227ENST00000475832 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
MRPL55-227ENST00000475832 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
MRPL55-227ENST00000475832 MT1BP07438 61 aa5.22□□□□□ -1.57
MRPL55-227ENST00000475832 ROMO1P60602 79 aa5.22□□□□□ -1.57
MRPL55-227ENST00000475832 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
MRPL55-227ENST00000475832 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
MRPL55-227ENST00000475832 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
MRPL55-227ENST00000475832 KMT2DO14686 5537 aa5.12□□□□□ -1.59
MRPL55-227ENST00000475832 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
MRPL55-227ENST00000475832 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
MRPL55-227ENST00000475832 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
MRPL55-227ENST00000475832 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
MRPL55-227ENST00000475832 TNP1P09430 55 aa5.06□□□□□ -1.6
MRPL55-227ENST00000475832 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
MRPL55-227ENST00000475832 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
MRPL55-227ENST00000475832 MT1XP80297 61 aa5.04□□□□□ -1.6
MRPL55-227ENST00000475832 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
MRPL55-227ENST00000475832 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
MRPL55-227ENST00000475832 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
MRPL55-227ENST00000475832 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
MRPL55-227ENST00000475832 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
MRPL55-227ENST00000475832 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
MRPL55-227ENST00000475832 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
MRPL55-227ENST00000475832 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
MRPL55-227ENST00000475832 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms