RNA–Protein interactions for RNA: ENST00000475060.1

CTPS1-207, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-207ENST00000475060 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
CTPS1-207ENST00000475060 RETNLBQ9BQ08 111 aa3.49□□□□□ -1.85
CTPS1-207ENST00000475060 ATP11AUNQ6ZP68 121 aa3.48□□□□□ -1.85
CTPS1-207ENST00000475060 LCA10Q71F78 164 aa3.48□□□□□ -1.85
CTPS1-207ENST00000475060 RYR3Q15413 4870 aa3.47□□□□□ -1.85
CTPS1-207ENST00000475060 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
CTPS1-207ENST00000475060 A6NED7 52 aa3.46□□□□□ -1.86
CTPS1-207ENST00000475060 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
CTPS1-207ENST00000475060 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
CTPS1-207ENST00000475060 SPINK7P58062 85 aa3.45□□□□□ -1.86
CTPS1-207ENST00000475060 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
CTPS1-207ENST00000475060 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
CTPS1-207ENST00000475060 COX6B2Q6YFQ2 88 aa3.44□□□□□ -1.86
CTPS1-207ENST00000475060 SPTSSBQ8NFR3 76 aa3.44□□□□□ -1.86
CTPS1-207ENST00000475060 KRTAP17-1Q9BYP8 105 aa3.44□□□□□ -1.86
CTPS1-207ENST00000475060 A0A1B0GU69 56 aa3.43□□□□□ -1.86
CTPS1-207ENST00000475060 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
CTPS1-207ENST00000475060 A8MU10 97 aa3.42□□□□□ -1.86
CTPS1-207ENST00000475060 KIAA1109Q2LD37 5005 aa3.42□□□□□ -1.86
CTPS1-207ENST00000475060 A6NN06 94 aa3.41□□□□□ -1.86
CTPS1-207ENST00000475060 KRTAP9-3Q9BYQ3 159 aa3.41□□□□□ -1.86
CTPS1-207ENST00000475060 UQCR11O14957 56 aa3.4□□□□□ -1.87
CTPS1-207ENST00000475060 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
CTPS1-207ENST00000475060 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
CTPS1-207ENST00000475060 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
CTPS1-207ENST00000475060 MYCBP2O75592 4640 aa3.37□□□□□ -1.87
CTPS1-207ENST00000475060 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
CTPS1-207ENST00000475060 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
CTPS1-207ENST00000475060 SEC61GP60059 68 aa3.35□□□□□ -1.87
CTPS1-207ENST00000475060 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
CTPS1-207ENST00000475060 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
CTPS1-207ENST00000475060 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.87
CTPS1-207ENST00000475060 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
CTPS1-207ENST00000475060 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
CTPS1-207ENST00000475060 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
CTPS1-207ENST00000475060 A0A1B0GU33 70 aa3.29□□□□□ -1.88
CTPS1-207ENST00000475060 H0YAA0 97 aa3.29□□□□□ -1.88
CTPS1-207ENST00000475060 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CTPS1-207ENST00000475060 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
CTPS1-207ENST00000475060 S4R3F8 94 aa3.26□□□□□ -1.89
CTPS1-207ENST00000475060 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
CTPS1-207ENST00000475060 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
CTPS1-207ENST00000475060 LRP2P98164 4655 aa3.25□□□□□ -1.89
CTPS1-207ENST00000475060 HERC2O95714 4834 aa3.24□□□□□ -1.89
CTPS1-207ENST00000475060 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
CTPS1-207ENST00000475060 BIRC6Q9NR09 4857 aa3.23□□□□□ -1.89
CTPS1-207ENST00000475060 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
CTPS1-207ENST00000475060 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.9
CTPS1-207ENST00000475060 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
CTPS1-207ENST00000475060 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
CTPS1-207ENST00000475060 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
CTPS1-207ENST00000475060 LPAP08519 4548 aa3.18□□□□□ -1.9
CTPS1-207ENST00000475060 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
CTPS1-207ENST00000475060 K7ERS5 55 aa3.16□□□□□ -1.9
CTPS1-207ENST00000475060 M0QZ58 72 aa3.15□□□□□ -1.91
CTPS1-207ENST00000475060 P0C880 135 aa3.15□□□□□ -1.91
CTPS1-207ENST00000475060 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
CTPS1-207ENST00000475060 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
CTPS1-207ENST00000475060 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
CTPS1-207ENST00000475060 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
CTPS1-207ENST00000475060 ROMO1P60602 79 aa3.09□□□□□ -1.91
CTPS1-207ENST00000475060 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
CTPS1-207ENST00000475060 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
CTPS1-207ENST00000475060 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
CTPS1-207ENST00000475060 HERC1Q15751 4861 aa3.06□□□□□ -1.92
CTPS1-207ENST00000475060 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
CTPS1-207ENST00000475060 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
CTPS1-207ENST00000475060 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
CTPS1-207ENST00000475060 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
CTPS1-207ENST00000475060 A0A0D9SG42 100 aa3.03□□□□□ -1.92
CTPS1-207ENST00000475060 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
CTPS1-207ENST00000475060 R4GN34 69 aa3□□□□□ -1.93
CTPS1-207ENST00000475060 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
CTPS1-207ENST00000475060 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
CTPS1-207ENST00000475060 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
CTPS1-207ENST00000475060 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
CTPS1-207ENST00000475060 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
CTPS1-207ENST00000475060 MUC2Q02817 5179 aa2.89□□□□□ -1.95
CTPS1-207ENST00000475060 MT1HP80294 61 aa2.88□□□□□ -1.95
CTPS1-207ENST00000475060 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
CTPS1-207ENST00000475060 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
CTPS1-207ENST00000475060 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
CTPS1-207ENST00000475060 MT2AP02795 61 aa2.82□□□□□ -1.96
CTPS1-207ENST00000475060 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
CTPS1-207ENST00000475060 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
CTPS1-207ENST00000475060 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
CTPS1-207ENST00000475060 MT1FP04733 61 aa2.79□□□□□ -1.96
CTPS1-207ENST00000475060 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
CTPS1-207ENST00000475060 TNP1P09430 55 aa2.76□□□□□ -1.97
CTPS1-207ENST00000475060 M0R2T5 61 aa2.74□□□□□ -1.97
CTPS1-207ENST00000475060 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
CTPS1-207ENST00000475060 MT1BP07438 61 aa2.72□□□□□ -1.97
CTPS1-207ENST00000475060 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
CTPS1-207ENST00000475060 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
CTPS1-207ENST00000475060 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
CTPS1-207ENST00000475060 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
CTPS1-207ENST00000475060 MT1XP80297 61 aa2.66□□□□□ -1.98
CTPS1-207ENST00000475060 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
CTPS1-207ENST00000475060 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
CTPS1-207ENST00000475060 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms