RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
YIF1A-206ENST00000474986 KRTAP9-3Q9BYQ3 159 aa10.73□□□□□ -0.69
YIF1A-206ENST00000474986 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
YIF1A-206ENST00000474986 NDUFC1O43677 76 aa10.62□□□□□ -0.71
YIF1A-206ENST00000474986 SERP2Q8N6R1 65 aa10.61□□□□□ -0.71
YIF1A-206ENST00000474986 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
YIF1A-206ENST00000474986 LCE2BO14633 110 aa10.57□□□□□ -0.72
YIF1A-206ENST00000474986 USH2AO75445 5202 aa10.56□□□□□ -0.72
YIF1A-206ENST00000474986 SNURFQ9Y675 71 aa10.51□□□□□ -0.73
YIF1A-206ENST00000474986 C20orf197Q8N268 126 aa10.5□□□□□ -0.73
YIF1A-206ENST00000474986 H0YAA0 97 aa10.46□□□□□ -0.73
YIF1A-206ENST00000474986 ACYP2P14621 99 aa10.43□□□□□ -0.74
YIF1A-206ENST00000474986 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
YIF1A-206ENST00000474986 COX7CP15954 63 aa10.39□□□□□ -0.75
YIF1A-206ENST00000474986 SSPOA2VEC9 5147 aa10.38□□□□□ -0.75
YIF1A-206ENST00000474986 KRTAP19-1Q8IUB9 90 aa10.36□□□□□ -0.75
YIF1A-206ENST00000474986 CRIPTQ9P021 101 aa10.34□□□□□ -0.75
YIF1A-206ENST00000474986 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.33□□□□□ -0.76
YIF1A-206ENST00000474986 SPRR2GQ9BYE4 73 aa10.32□□□□□ -0.76
YIF1A-206ENST00000474986 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
YIF1A-206ENST00000474986 SPTSSBQ8NFR3 76 aa10.25□□□□□ -0.77
YIF1A-206ENST00000474986 KRTAP9-7A8MTY7 169 aa10.24□□□□□ -0.77
YIF1A-206ENST00000474986 CHKB-CPT1BH3BT56 60 aa10.22□□□□□ -0.77
YIF1A-206ENST00000474986 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
YIF1A-206ENST00000474986 KRTAP19-8Q3LI54 63 aa10.19□□□□□ -0.78
YIF1A-206ENST00000474986 FCGBPQ9Y6R7 5405 aaPredicted RBP10.19□□□□□ -0.78
YIF1A-206ENST00000474986 KRTAP19-6Q3LI70 58 aa10.18□□□□□ -0.78
YIF1A-206ENST00000474986 H7BZZ5 65 aa10.14□□□□□ -0.79
YIF1A-206ENST00000474986 Q5VV11 94 aa10.14□□□□□ -0.79
YIF1A-206ENST00000474986 MT1BP07438 61 aa10.1□□□□□ -0.79
YIF1A-206ENST00000474986 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
YIF1A-206ENST00000474986 CYSTM1Q9H1C7 97 aa10.1□□□□□ -0.79
YIF1A-206ENST00000474986 P0C880 135 aa10.09□□□□□ -0.79
YIF1A-206ENST00000474986 COA5Q86WW8 74 aa10.04□□□□□ -0.8
YIF1A-206ENST00000474986 R4GN34 69 aa10.02□□□□□ -0.81
YIF1A-206ENST00000474986 CCDC179H3BU77 68 aa9.98□□□□□ -0.81
YIF1A-206ENST00000474986 M0QZ58 72 aa9.93□□□□□ -0.82
YIF1A-206ENST00000474986 A6NN06 94 aa9.85□□□□□ -0.83
YIF1A-206ENST00000474986 MACF1Q9UPN3 7388 aaKnown RBP9.84□□□□□ -0.83
YIF1A-206ENST00000474986 ATP5EP56381 51 aaPredicted RBP9.82□□□□□ -0.84
YIF1A-206ENST00000474986 KRTAP10-5P60370 271 aa9.81□□□□□ -0.84
YIF1A-206ENST00000474986 PLAC4Q8WY50 150 aa9.77□□□□□ -0.85
YIF1A-206ENST00000474986 SEC61GP60059 68 aa9.74□□□□□ -0.85
YIF1A-206ENST00000474986 LINC01554Q52M75 96 aa9.74□□□□□ -0.85
YIF1A-206ENST00000474986 SERP1Q9Y6X1 66 aa9.71□□□□□ -0.86
YIF1A-206ENST00000474986 SYNE2Q8WXH0 6885 aaKnown RBP9.71□□□□□ -0.86
YIF1A-206ENST00000474986 TMEM258P61165 79 aa9.69□□□□□ -0.86
YIF1A-206ENST00000474986 PRO2289Q9P1D8 64 aa9.63□□□□□ -0.87
YIF1A-206ENST00000474986 KRTAP13-4Q3LI77 160 aa9.59□□□□□ -0.87
YIF1A-206ENST00000474986 MT1XP80297 61 aa9.57□□□□□ -0.88
YIF1A-206ENST00000474986 KRTAP6-3Q3LI67 103 aa9.56□□□□□ -0.88
YIF1A-206ENST00000474986 A0A1B0GU33 70 aa9.52□□□□□ -0.89
YIF1A-206ENST00000474986 A0A1B0GU69 56 aa9.52□□□□□ -0.89
YIF1A-206ENST00000474986 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
YIF1A-206ENST00000474986 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
YIF1A-206ENST00000474986 LINC01558Q9Y6Z2 57 aa9.38□□□□□ -0.91
YIF1A-206ENST00000474986 A0A0D9SG42 100 aa9.33□□□□□ -0.92
YIF1A-206ENST00000474986 KRTAP12-2P59991 146 aa9.31□□□□□ -0.92
YIF1A-206ENST00000474986 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
YIF1A-206ENST00000474986 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.93
YIF1A-206ENST00000474986 KRTAP12-1P59990 96 aa9.19□□□□□ -0.94
YIF1A-206ENST00000474986 PCP4P48539 62 aa9.18□□□□□ -0.94
YIF1A-206ENST00000474986 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
YIF1A-206ENST00000474986 MUC12Q9UKN1 5478 aa9.15□□□□□ -0.94
YIF1A-206ENST00000474986 KRTAP5-9P26371 169 aa9.15□□□□□ -0.94
YIF1A-206ENST00000474986 KMT2DO14686 5537 aa9.14□□□□□ -0.95
YIF1A-206ENST00000474986 NEBP20929 6669 aa9.14□□□□□ -0.95
YIF1A-206ENST00000474986 A8MU10 97 aa9.12□□□□□ -0.95
YIF1A-206ENST00000474986 KRTAP10-7P60409 375 aaPredicted RBP9.12□□□□□ -0.95
YIF1A-206ENST00000474986 KRTAP10-12P60413 245 aa9.12□□□□□ -0.95
YIF1A-206ENST00000474986 V9GYY9 64 aa9.11□□□□□ -0.95
YIF1A-206ENST00000474986 UQCR11O14957 56 aa9.08□□□□□ -0.96
YIF1A-206ENST00000474986 Q1T7F1 81 aa9.04□□□□□ -0.96
YIF1A-206ENST00000474986 KRTAP8-1Q8IUC2 63 aa9.04□□□□□ -0.96
YIF1A-206ENST00000474986 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
YIF1A-206ENST00000474986 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
YIF1A-206ENST00000474986 RPS28P62857 69 aaKnown RBP8.96□□□□□ -0.98
YIF1A-206ENST00000474986 KRTAP20-1Q3LI63 56 aa8.94□□□□□ -0.98
YIF1A-206ENST00000474986 SPRR2FQ96RM1 72 aa8.93□□□□□ -0.98
YIF1A-206ENST00000474986 PSPHP1O15172 72 aa8.91□□□□□ -0.98
YIF1A-206ENST00000474986 MIR22HGQ0VDD5 57 aa8.89□□□□□ -0.99
YIF1A-206ENST00000474986 MDN1Q9NU22 5596 aa8.86□□□□□ -0.99
YIF1A-206ENST00000474986 C10orf95Q9H7T3 257 aa8.73□□□□□ -1.01
YIF1A-206ENST00000474986 SPRR2EP22531 72 aa8.7□□□□□ -1.02
YIF1A-206ENST00000474986 SPRR2BP35325 72 aa8.7□□□□□ -1.02
YIF1A-206ENST00000474986 SPRR2AP35326 72 aa8.7□□□□□ -1.02
YIF1A-206ENST00000474986 K7ERS5 55 aa8.68□□□□□ -1.02
YIF1A-206ENST00000474986 A6NED7 52 aa8.67□□□□□ -1.02
YIF1A-206ENST00000474986 TNP1P09430 55 aa8.67□□□□□ -1.02
YIF1A-206ENST00000474986 KRTAP2-3P0C7H8 128 aa8.66□□□□□ -1.02
YIF1A-206ENST00000474986 LCE1AQ5T7P2 110 aa8.66□□□□□ -1.02
YIF1A-206ENST00000474986 KRTAP2-4Q9BYR9 128 aa8.66□□□□□ -1.02
YIF1A-206ENST00000474986 KRTAP19-7Q3SYF9 63 aa8.56□□□□□ -1.04
YIF1A-206ENST00000474986 MT1EP04732 61 aa8.47□□□□□ -1.05
YIF1A-206ENST00000474986 LCE3AQ5TA76 89 aa8.44□□□□□ -1.06
YIF1A-206ENST00000474986 KRTAP19-5Q3LI72 72 aa8.42□□□□□ -1.06
YIF1A-206ENST00000474986 SPRR2DP22532 72 aa8.41□□□□□ -1.06
YIF1A-206ENST00000474986 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
YIF1A-206ENST00000474986 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
YIF1A-206ENST00000474986 KRTAP2-2Q9BYT5 123 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms