RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 LINC01558Q9Y6Z2 57 aa10.45□□□□□ -0.74
EDEM3-206ENST00000474725 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
EDEM3-206ENST00000474725 COX6B2Q6YFQ2 88 aa10.32□□□□□ -0.76
EDEM3-206ENST00000474725 KRTAP3-1Q9BYR8 98 aa10.32□□□□□ -0.76
EDEM3-206ENST00000474725 A6NED7 52 aa10.26□□□□□ -0.77
EDEM3-206ENST00000474725 RBM12B-AS1Q9P1G2 102 aa10.25□□□□□ -0.77
EDEM3-206ENST00000474725 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
EDEM3-206ENST00000474725 MUC2Q02817 5179 aa10.16□□□□□ -0.78
EDEM3-206ENST00000474725 A0A1B0GU69 56 aa10.15□□□□□ -0.78
EDEM3-206ENST00000474725 CDC42SE1Q9NRR8 79 aa10.15□□□□□ -0.79
EDEM3-206ENST00000474725 LCA10Q71F78 164 aa10.14□□□□□ -0.79
EDEM3-206ENST00000474725 A8MU10 97 aa10.13□□□□□ -0.79
EDEM3-206ENST00000474725 KRTAP19-2Q3LHN2 52 aa10.13□□□□□ -0.79
EDEM3-206ENST00000474725 H1FX-AS1Q4G0G2 97 aa10.12□□□□□ -0.79
EDEM3-206ENST00000474725 RNF213Q63HN8 5207 aa10.1□□□□□ -0.79
EDEM3-206ENST00000474725 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
EDEM3-206ENST00000474725 S4R3F8 94 aa10.01□□□□□ -0.81
EDEM3-206ENST00000474725 PMAIP1Q13794 54 aa9.96□□□□□ -0.81
EDEM3-206ENST00000474725 SEC61GP60059 68 aa9.95□□□□□ -0.82
EDEM3-206ENST00000474725 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
EDEM3-206ENST00000474725 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
EDEM3-206ENST00000474725 UQCR11O14957 56 aa9.94□□□□□ -0.82
EDEM3-206ENST00000474725 SPATA8Q6RVD6 105 aa9.89□□□□□ -0.83
EDEM3-206ENST00000474725 MIR22HGQ0VDD5 57 aa9.86□□□□□ -0.83
EDEM3-206ENST00000474725 A6NN06 94 aa9.82□□□□□ -0.84
EDEM3-206ENST00000474725 FLGP20930 4061 aaPredicted RBP9.81□□□□□ -0.84
EDEM3-206ENST00000474725 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
EDEM3-206ENST00000474725 FAT4Q6V0I7 4981 aa9.76□□□□□ -0.85
EDEM3-206ENST00000474725 MT1HP80294 61 aa9.75□□□□□ -0.85
EDEM3-206ENST00000474725 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
EDEM3-206ENST00000474725 A0A1B0GU33 70 aa9.68□□□□□ -0.86
EDEM3-206ENST00000474725 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
EDEM3-206ENST00000474725 M0R2T5 61 aa9.65□□□□□ -0.86
EDEM3-206ENST00000474725 H0YAA0 97 aa9.62□□□□□ -0.87
EDEM3-206ENST00000474725 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
EDEM3-206ENST00000474725 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
EDEM3-206ENST00000474725 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
EDEM3-206ENST00000474725 P0C880 135 aa9.5□□□□□ -0.89
EDEM3-206ENST00000474725 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
EDEM3-206ENST00000474725 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
EDEM3-206ENST00000474725 LORP23490 312 aaPredicted RBP9.36□□□□□ -0.91
EDEM3-206ENST00000474725 K7ERS5 55 aa9.34□□□□□ -0.91
EDEM3-206ENST00000474725 MT2AP02795 61 aa9.34□□□□□ -0.91
EDEM3-206ENST00000474725 KRTAP13-4Q3LI77 160 aa9.31□□□□□ -0.92
EDEM3-206ENST00000474725 MT1FP04733 61 aa9.29□□□□□ -0.92
EDEM3-206ENST00000474725 PRAC1Q96KF2 57 aa9.27□□□□□ -0.93
EDEM3-206ENST00000474725 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
EDEM3-206ENST00000474725 R4GN34 69 aa9.21□□□□□ -0.93
EDEM3-206ENST00000474725 M0QZ58 72 aa9.21□□□□□ -0.94
EDEM3-206ENST00000474725 A0A0D9SG42 100 aa9.19□□□□□ -0.94
EDEM3-206ENST00000474725 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
EDEM3-206ENST00000474725 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
EDEM3-206ENST00000474725 KRTAP19-1Q8IUB9 90 aa9.06□□□□□ -0.96
EDEM3-206ENST00000474725 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
EDEM3-206ENST00000474725 KRTAP9-3Q9BYQ3 159 aa9.04□□□□□ -0.96
EDEM3-206ENST00000474725 ROMO1P60602 79 aa9.02□□□□□ -0.97
EDEM3-206ENST00000474725 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
EDEM3-206ENST00000474725 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
EDEM3-206ENST00000474725 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
EDEM3-206ENST00000474725 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
EDEM3-206ENST00000474725 KRTAP19-8Q3LI54 63 aa8.84□□□□□ -0.99
EDEM3-206ENST00000474725 LCE2BO14633 110 aa8.83□□□□□ -1
EDEM3-206ENST00000474725 MT1BP07438 61 aa8.76□□□□□ -1.01
EDEM3-206ENST00000474725 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
EDEM3-206ENST00000474725 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
EDEM3-206ENST00000474725 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
EDEM3-206ENST00000474725 USH2AO75445 5202 aa8.57□□□□□ -1.04
EDEM3-206ENST00000474725 MT1XP80297 61 aa8.43□□□□□ -1.06
EDEM3-206ENST00000474725 KRTAP10-5P60370 271 aa8.42□□□□□ -1.06
EDEM3-206ENST00000474725 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
EDEM3-206ENST00000474725 PRO2289Q9P1D8 64 aa8.33□□□□□ -1.08
EDEM3-206ENST00000474725 SSPOA2VEC9 5147 aa8.31□□□□□ -1.08
EDEM3-206ENST00000474725 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
EDEM3-206ENST00000474725 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
EDEM3-206ENST00000474725 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
EDEM3-206ENST00000474725 TNP1P09430 55 aa8.17□□□□□ -1.1
EDEM3-206ENST00000474725 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
EDEM3-206ENST00000474725 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
EDEM3-206ENST00000474725 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
EDEM3-206ENST00000474725 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
EDEM3-206ENST00000474725 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
EDEM3-206ENST00000474725 FCGBPQ9Y6R7 5405 aaPredicted RBP7.99□□□□□ -1.13
EDEM3-206ENST00000474725 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
EDEM3-206ENST00000474725 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.16
EDEM3-206ENST00000474725 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.16
EDEM3-206ENST00000474725 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
EDEM3-206ENST00000474725 KMT2DO14686 5537 aa7.75□□□□□ -1.17
EDEM3-206ENST00000474725 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
EDEM3-206ENST00000474725 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
EDEM3-206ENST00000474725 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
EDEM3-206ENST00000474725 H3BS24 57 aa7.56□□□□□ -1.2
EDEM3-206ENST00000474725 MACF1Q9UPN3 7388 aaKnown RBP7.56□□□□□ -1.2
EDEM3-206ENST00000474725 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
EDEM3-206ENST00000474725 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.2
EDEM3-206ENST00000474725 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.48□□□□□ -1.21
EDEM3-206ENST00000474725 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
EDEM3-206ENST00000474725 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
EDEM3-206ENST00000474725 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
EDEM3-206ENST00000474725 KRTAP4-6Q9BYQ5 205 aa7.42□□□□□ -1.22
EDEM3-206ENST00000474725 MT1EP04732 61 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms