RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 H1FX-AS1Q4G0G2 97 aa10.17□□□□□ -0.78
CDHR3-210ENST00000474330 RPS28P62857 69 aaKnown RBP10.12□□□□□ -0.79
CDHR3-210ENST00000474330 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
CDHR3-210ENST00000474330 S4R3F8 94 aa10.04□□□□□ -0.8
CDHR3-210ENST00000474330 KRTAP9-2Q9BYQ4 174 aa10.03□□□□□ -0.8
CDHR3-210ENST00000474330 MT1HP80294 61 aa10.02□□□□□ -0.81
CDHR3-210ENST00000474330 LCA10Q71F78 164 aa10.01□□□□□ -0.81
CDHR3-210ENST00000474330 FLGP20930 4061 aaPredicted RBP10□□□□□ -0.81
CDHR3-210ENST00000474330 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
CDHR3-210ENST00000474330 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
CDHR3-210ENST00000474330 SMIM26A0A096LP01 95 aa9.91□□□□□ -0.82
CDHR3-210ENST00000474330 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
CDHR3-210ENST00000474330 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
CDHR3-210ENST00000474330 KRTAP10-6P60371 365 aaPredicted RBP9.8□□□□□ -0.84
CDHR3-210ENST00000474330 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
CDHR3-210ENST00000474330 M0R2T5 61 aa9.78□□□□□ -0.84
CDHR3-210ENST00000474330 Q1T7F1 81 aa9.77□□□□□ -0.85
CDHR3-210ENST00000474330 LINC01558Q9Y6Z2 57 aa9.76□□□□□ -0.85
CDHR3-210ENST00000474330 V9GYY9 64 aa9.75□□□□□ -0.85
CDHR3-210ENST00000474330 FSIP2Q5CZC0 6907 aa9.67□□□□□ -0.86
CDHR3-210ENST00000474330 A0A1B0GU69 56 aa9.64□□□□□ -0.87
CDHR3-210ENST00000474330 H0YAA0 97 aa9.64□□□□□ -0.87
CDHR3-210ENST00000474330 SEC61GP60059 68 aa9.64□□□□□ -0.87
CDHR3-210ENST00000474330 KRTAP9-6A0A140TA67 174 aa9.63□□□□□ -0.87
CDHR3-210ENST00000474330 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
CDHR3-210ENST00000474330 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
CDHR3-210ENST00000474330 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
CDHR3-210ENST00000474330 PSPHP1O15172 72 aa9.57□□□□□ -0.88
CDHR3-210ENST00000474330 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
CDHR3-210ENST00000474330 Q5VV11 94 aa9.5□□□□□ -0.89
CDHR3-210ENST00000474330 P0C880 135 aa9.49□□□□□ -0.89
CDHR3-210ENST00000474330 CRCT1Q9UGL9 99 aa9.48□□□□□ -0.89
CDHR3-210ENST00000474330 A0A1B0GU33 70 aa9.41□□□□□ -0.9
CDHR3-210ENST00000474330 MT2AP02795 61 aa9.38□□□□□ -0.91
CDHR3-210ENST00000474330 UQCR11O14957 56 aa9.33□□□□□ -0.92
CDHR3-210ENST00000474330 MT1FP04733 61 aa9.32□□□□□ -0.92
CDHR3-210ENST00000474330 KRTAP10-10P60014 251 aa9.31□□□□□ -0.92
CDHR3-210ENST00000474330 USH2AO75445 5202 aa9.3□□□□□ -0.92
CDHR3-210ENST00000474330 A6NED7 52 aa9.28□□□□□ -0.92
CDHR3-210ENST00000474330 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
CDHR3-210ENST00000474330 M0QZ58 72 aa9.27□□□□□ -0.93
CDHR3-210ENST00000474330 KRTAP13-4Q3LI77 160 aa9.25□□□□□ -0.93
CDHR3-210ENST00000474330 R4GN34 69 aa9.25□□□□□ -0.93
CDHR3-210ENST00000474330 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
CDHR3-210ENST00000474330 KRTAP9-3Q9BYQ3 159 aa9.23□□□□□ -0.93
CDHR3-210ENST00000474330 SSPOA2VEC9 5147 aa9.21□□□□□ -0.94
CDHR3-210ENST00000474330 MIR22HGQ0VDD5 57 aa9.2□□□□□ -0.94
CDHR3-210ENST00000474330 LCE2BO14633 110 aa9.16□□□□□ -0.94
CDHR3-210ENST00000474330 SPRR2GQ9BYE4 73 aa9.12□□□□□ -0.95
CDHR3-210ENST00000474330 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
CDHR3-210ENST00000474330 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
CDHR3-210ENST00000474330 A8MU10 97 aa9.08□□□□□ -0.96
CDHR3-210ENST00000474330 BRK1Q8WUW1 75 aa9.05□□□□□ -0.96
CDHR3-210ENST00000474330 A0A0D9SG42 100 aa9.05□□□□□ -0.96
CDHR3-210ENST00000474330 LINC01554Q52M75 96 aa9.05□□□□□ -0.96
CDHR3-210ENST00000474330 FCGBPQ9Y6R7 5405 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-210ENST00000474330 A6NN06 94 aa8.94□□□□□ -0.98
CDHR3-210ENST00000474330 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
CDHR3-210ENST00000474330 KRTAP19-8Q3LI54 63 aa8.91□□□□□ -0.98
CDHR3-210ENST00000474330 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
CDHR3-210ENST00000474330 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
CDHR3-210ENST00000474330 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
CDHR3-210ENST00000474330 K7ERS5 55 aa8.82□□□□□ -1
CDHR3-210ENST00000474330 KRTAP19-6Q3LI70 58 aa8.8□□□□□ -1
CDHR3-210ENST00000474330 MT1BP07438 61 aa8.79□□□□□ -1
CDHR3-210ENST00000474330 PRO0628Q9UI54 55 aa8.79□□□□□ -1
CDHR3-210ENST00000474330 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
CDHR3-210ENST00000474330 MACF1Q9UPN3 7388 aaKnown RBP8.68□□□□□ -1.02
CDHR3-210ENST00000474330 KRTAP9-7A8MTY7 169 aa8.67□□□□□ -1.02
CDHR3-210ENST00000474330 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
CDHR3-210ENST00000474330 SYNE2Q8WXH0 6885 aaKnown RBP8.61□□□□□ -1.03
CDHR3-210ENST00000474330 PMAIP1Q13794 54 aa8.57□□□□□ -1.04
CDHR3-210ENST00000474330 MT1XP80297 61 aa8.46□□□□□ -1.06
CDHR3-210ENST00000474330 KRTAP10-5P60370 271 aa8.45□□□□□ -1.06
CDHR3-210ENST00000474330 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
CDHR3-210ENST00000474330 ROMO1P60602 79 aa8.43□□□□□ -1.06
CDHR3-210ENST00000474330 PRO2289Q9P1D8 64 aa8.4□□□□□ -1.06
CDHR3-210ENST00000474330 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
CDHR3-210ENST00000474330 TNP1P09430 55 aa8.21□□□□□ -1.09
CDHR3-210ENST00000474330 KRTAP25-1Q3LHN0 102 aa8.2□□□□□ -1.1
CDHR3-210ENST00000474330 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
CDHR3-210ENST00000474330 KRTAP10-7P60409 375 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-210ENST00000474330 MUC12Q9UKN1 5478 aa8.07□□□□□ -1.12
CDHR3-210ENST00000474330 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
CDHR3-210ENST00000474330 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
CDHR3-210ENST00000474330 KMT2DO14686 5537 aa8.01□□□□□ -1.13
CDHR3-210ENST00000474330 NEBP20929 6669 aa8.01□□□□□ -1.13
CDHR3-210ENST00000474330 KRTAP5-9P26371 169 aa7.96□□□□□ -1.13
CDHR3-210ENST00000474330 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
CDHR3-210ENST00000474330 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
CDHR3-210ENST00000474330 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
CDHR3-210ENST00000474330 MDN1Q9NU22 5596 aa7.87□□□□□ -1.15
CDHR3-210ENST00000474330 KRTAP4-8A0A0G2JLE6 195 aa7.83□□□□□ -1.16
CDHR3-210ENST00000474330 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
CDHR3-210ENST00000474330 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
CDHR3-210ENST00000474330 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.17
CDHR3-210ENST00000474330 SVIPQ8NHG7 77 aa7.67□□□□□ -1.18
CDHR3-210ENST00000474330 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
CDHR3-210ENST00000474330 KRTAP20-1Q3LI63 56 aa7.59□□□□□ -1.19
CDHR3-210ENST00000474330 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms