RNA–Protein interactions for RNA: ENST00000472884.6

FAM53A-205, Transcript of family with sequence similarity 53 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53A, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-205ENST00000472884 A6NED7 52 aa9.65□□□□□ -0.87
FAM53A-205ENST00000472884 LCA10Q71F78 164 aa9.61□□□□□ -0.87
FAM53A-205ENST00000472884 CDC42SE1Q9NRR8 79 aa9.61□□□□□ -0.87
FAM53A-205ENST00000472884 SEC61BP60468 96 aaKnown RBP9.59□□□□□ -0.87
FAM53A-205ENST00000472884 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
FAM53A-205ENST00000472884 SEC61GP60059 68 aa9.49□□□□□ -0.89
FAM53A-205ENST00000472884 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
FAM53A-205ENST00000472884 KTN1-AS1Q86SY8 53 aa9.47□□□□□ -0.89
FAM53A-205ENST00000472884 A6NN06 94 aa9.46□□□□□ -0.9
FAM53A-205ENST00000472884 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
FAM53A-205ENST00000472884 A0A1B0GU69 56 aa9.4□□□□□ -0.9
FAM53A-205ENST00000472884 KRTAP3-1Q9BYR8 98 aa9.4□□□□□ -0.91
FAM53A-205ENST00000472884 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
FAM53A-205ENST00000472884 MUC2Q02817 5179 aa9.34□□□□□ -0.91
FAM53A-205ENST00000472884 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
FAM53A-205ENST00000472884 UBR4Q5T4S7 5183 aa9.27□□□□□ -0.93
FAM53A-205ENST00000472884 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
FAM53A-205ENST00000472884 UQCR11O14957 56 aa9.2□□□□□ -0.94
FAM53A-205ENST00000472884 H1FX-AS1Q4G0G2 97 aa9.2□□□□□ -0.94
FAM53A-205ENST00000472884 MIR22HGQ0VDD5 57 aa9.2□□□□□ -0.94
FAM53A-205ENST00000472884 RNF213Q63HN8 5207 aa9.15□□□□□ -0.94
FAM53A-205ENST00000472884 S4R3F8 94 aa9.14□□□□□ -0.95
FAM53A-205ENST00000472884 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
FAM53A-205ENST00000472884 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
FAM53A-205ENST00000472884 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
FAM53A-205ENST00000472884 H0YAA0 97 aa8.95□□□□□ -0.98
FAM53A-205ENST00000472884 CSAG1Q6PB30 78 aa8.95□□□□□ -0.98
FAM53A-205ENST00000472884 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
FAM53A-205ENST00000472884 A0A1B0GU33 70 aa8.92□□□□□ -0.98
FAM53A-205ENST00000472884 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
FAM53A-205ENST00000472884 PRAC1Q96KF2 57 aa8.92□□□□□ -0.98
FAM53A-205ENST00000472884 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
FAM53A-205ENST00000472884 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
FAM53A-205ENST00000472884 MT1HP80294 61 aa8.75□□□□□ -1.01
FAM53A-205ENST00000472884 M0R2T5 61 aa8.72□□□□□ -1.01
FAM53A-205ENST00000472884 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
FAM53A-205ENST00000472884 KRTAP10-6P60371 365 aaPredicted RBP8.71□□□□□ -1.01
FAM53A-205ENST00000472884 P0C880 135 aa8.68□□□□□ -1.02
FAM53A-205ENST00000472884 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
FAM53A-205ENST00000472884 K7ERS5 55 aa8.6□□□□□ -1.03
FAM53A-205ENST00000472884 KRTAP25-1Q3LHN0 102 aa8.52□□□□□ -1.05
FAM53A-205ENST00000472884 A0A0D9SG42 100 aa8.51□□□□□ -1.05
FAM53A-205ENST00000472884 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
FAM53A-205ENST00000472884 R4GN34 69 aa8.45□□□□□ -1.06
FAM53A-205ENST00000472884 M0QZ58 72 aa8.44□□□□□ -1.06
FAM53A-205ENST00000472884 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
FAM53A-205ENST00000472884 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
FAM53A-205ENST00000472884 ROMO1P60602 79 aa8.41□□□□□ -1.06
FAM53A-205ENST00000472884 MT2AP02795 61 aa8.38□□□□□ -1.07
FAM53A-205ENST00000472884 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
FAM53A-205ENST00000472884 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
FAM53A-205ENST00000472884 MT1FP04733 61 aa8.34□□□□□ -1.07
FAM53A-205ENST00000472884 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
FAM53A-205ENST00000472884 KRTAP12-1P59990 96 aa8.27□□□□□ -1.09
FAM53A-205ENST00000472884 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
FAM53A-205ENST00000472884 SPRR2GQ9BYE4 73 aa8.19□□□□□ -1.1
FAM53A-205ENST00000472884 KRTAP19-1Q8IUB9 90 aa8.17□□□□□ -1.1
FAM53A-205ENST00000472884 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
FAM53A-205ENST00000472884 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
FAM53A-205ENST00000472884 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
FAM53A-205ENST00000472884 H3BS24 57 aa7.99□□□□□ -1.13
FAM53A-205ENST00000472884 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.13
FAM53A-205ENST00000472884 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
FAM53A-205ENST00000472884 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
FAM53A-205ENST00000472884 LCE2BO14633 110 aa7.9□□□□□ -1.15
FAM53A-205ENST00000472884 MT1BP07438 61 aa7.88□□□□□ -1.15
FAM53A-205ENST00000472884 USH2AO75445 5202 aa7.78□□□□□ -1.16
FAM53A-205ENST00000472884 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
FAM53A-205ENST00000472884 FSIP2Q5CZC0 6907 aa7.69□□□□□ -1.18
FAM53A-205ENST00000472884 MT1XP80297 61 aa7.62□□□□□ -1.19
FAM53A-205ENST00000472884 KRTAP10-5P60370 271 aa7.61□□□□□ -1.19
FAM53A-205ENST00000472884 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
FAM53A-205ENST00000472884 SSPOA2VEC9 5147 aa7.54□□□□□ -1.2
FAM53A-205ENST00000472884 NDUFAF8A1L188 74 aa7.53□□□□□ -1.2
FAM53A-205ENST00000472884 TNP1P09430 55 aa7.51□□□□□ -1.21
FAM53A-205ENST00000472884 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
FAM53A-205ENST00000472884 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
FAM53A-205ENST00000472884 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
FAM53A-205ENST00000472884 KRTAP10-7P60409 375 aaPredicted RBP7.33□□□□□ -1.24
FAM53A-205ENST00000472884 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
FAM53A-205ENST00000472884 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
FAM53A-205ENST00000472884 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
FAM53A-205ENST00000472884 FCGBPQ9Y6R7 5405 aaPredicted RBP7.2□□□□□ -1.26
FAM53A-205ENST00000472884 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
FAM53A-205ENST00000472884 KMT2DO14686 5537 aa7.18□□□□□ -1.26
FAM53A-205ENST00000472884 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
FAM53A-205ENST00000472884 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
FAM53A-205ENST00000472884 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
FAM53A-205ENST00000472884 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
FAM53A-205ENST00000472884 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
FAM53A-205ENST00000472884 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
FAM53A-205ENST00000472884 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
FAM53A-205ENST00000472884 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
FAM53A-205ENST00000472884 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
FAM53A-205ENST00000472884 A0A0A0MQY5 61 aa6.84□□□□□ -1.31
FAM53A-205ENST00000472884 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
FAM53A-205ENST00000472884 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
FAM53A-205ENST00000472884 MT1EP04732 61 aa6.68□□□□□ -1.34
FAM53A-205ENST00000472884 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
FAM53A-205ENST00000472884 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms