RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
SNX4-203ENST00000471751 TMEM258P61165 79 aa9.34□□□□□ -0.91
SNX4-203ENST00000471751 MT1HP80294 61 aa9.31□□□□□ -0.92
SNX4-203ENST00000471751 S4R3F8 94 aa9.31□□□□□ -0.92
SNX4-203ENST00000471751 LCA10Q71F78 164 aa9.23□□□□□ -0.93
SNX4-203ENST00000471751 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
SNX4-203ENST00000471751 SPTSSBQ8NFR3 76 aa9.2□□□□□ -0.94
SNX4-203ENST00000471751 M0R2T5 61 aa9.19□□□□□ -0.94
SNX4-203ENST00000471751 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
SNX4-203ENST00000471751 LCE2DQ5TA82 110 aaPredicted RBP9.17□□□□□ -0.94
SNX4-203ENST00000471751 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
SNX4-203ENST00000471751 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
SNX4-203ENST00000471751 COA5Q86WW8 74 aa9.14□□□□□ -0.95
SNX4-203ENST00000471751 FSIP2Q5CZC0 6907 aa9.13□□□□□ -0.95
SNX4-203ENST00000471751 H0YAA0 97 aa9.05□□□□□ -0.96
SNX4-203ENST00000471751 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
SNX4-203ENST00000471751 SERP1Q9Y6X1 66 aa9.04□□□□□ -0.96
SNX4-203ENST00000471751 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
SNX4-203ENST00000471751 RPS28P62857 69 aaKnown RBP8.95□□□□□ -0.98
SNX4-203ENST00000471751 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
SNX4-203ENST00000471751 MT2AP02795 61 aa8.83□□□□□ -1
SNX4-203ENST00000471751 SEC61GP60059 68 aa8.82□□□□□ -1
SNX4-203ENST00000471751 ADM2Q7Z4H4 148 aa8.81□□□□□ -1
SNX4-203ENST00000471751 CRIPTQ9P021 101 aa8.8□□□□□ -1
SNX4-203ENST00000471751 KRTAP10-10P60014 251 aa8.78□□□□□ -1
SNX4-203ENST00000471751 SMIM26A0A096LP01 95 aa8.77□□□□□ -1.01
SNX4-203ENST00000471751 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
SNX4-203ENST00000471751 V9GYY9 64 aa8.77□□□□□ -1.01
SNX4-203ENST00000471751 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
SNX4-203ENST00000471751 MT1FP04733 61 aa8.75□□□□□ -1.01
SNX4-203ENST00000471751 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
SNX4-203ENST00000471751 A0A1B0GU69 56 aa8.71□□□□□ -1.02
SNX4-203ENST00000471751 Q1T7F1 81 aa8.69□□□□□ -1.02
SNX4-203ENST00000471751 P0C880 135 aa8.67□□□□□ -1.02
SNX4-203ENST00000471751 KRTAP9-7A8MTY7 169 aa8.64□□□□□ -1.03
SNX4-203ENST00000471751 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
SNX4-203ENST00000471751 M0QZ58 72 aa8.62□□□□□ -1.03
SNX4-203ENST00000471751 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
SNX4-203ENST00000471751 R4GN34 69 aa8.59□□□□□ -1.03
SNX4-203ENST00000471751 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
SNX4-203ENST00000471751 A0A1B0GU33 70 aa8.55□□□□□ -1.04
SNX4-203ENST00000471751 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
SNX4-203ENST00000471751 Q5VV11 94 aa8.52□□□□□ -1.05
SNX4-203ENST00000471751 USH2AO75445 5202 aa8.51□□□□□ -1.05
SNX4-203ENST00000471751 SSPOA2VEC9 5147 aa8.47□□□□□ -1.05
SNX4-203ENST00000471751 UQCR11O14957 56 aa8.43□□□□□ -1.06
SNX4-203ENST00000471751 LCE2BO14633 110 aa8.42□□□□□ -1.06
SNX4-203ENST00000471751 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
SNX4-203ENST00000471751 PSPHP1O15172 72 aa8.4□□□□□ -1.06
SNX4-203ENST00000471751 A6NN06 94 aa8.37□□□□□ -1.07
SNX4-203ENST00000471751 KRTAP13-4Q3LI77 160 aa8.36□□□□□ -1.07
SNX4-203ENST00000471751 SPATA8Q6RVD6 105 aa8.31□□□□□ -1.08
SNX4-203ENST00000471751 LINC01554Q52M75 96 aa8.28□□□□□ -1.08
SNX4-203ENST00000471751 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
SNX4-203ENST00000471751 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
SNX4-203ENST00000471751 MT1BP07438 61 aa8.24□□□□□ -1.09
SNX4-203ENST00000471751 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
SNX4-203ENST00000471751 A6NED7 52 aa8.22□□□□□ -1.09
SNX4-203ENST00000471751 A0A0D9SG42 100 aa8.16□□□□□ -1.1
SNX4-203ENST00000471751 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
SNX4-203ENST00000471751 A8MU10 97 aa8.11□□□□□ -1.11
SNX4-203ENST00000471751 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
SNX4-203ENST00000471751 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.11
SNX4-203ENST00000471751 KRTAP19-6Q3LI70 58 aa8.08□□□□□ -1.12
SNX4-203ENST00000471751 CDC42SE1Q9NRR8 79 aa8.08□□□□□ -1.12
SNX4-203ENST00000471751 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
SNX4-203ENST00000471751 K7ERS5 55 aa8.03□□□□□ -1.12
SNX4-203ENST00000471751 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
SNX4-203ENST00000471751 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
SNX4-203ENST00000471751 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
SNX4-203ENST00000471751 KRTAP10-5P60370 271 aa7.96□□□□□ -1.14
SNX4-203ENST00000471751 MT1XP80297 61 aa7.9□□□□□ -1.14
SNX4-203ENST00000471751 BRK1Q8WUW1 75 aa7.82□□□□□ -1.16
SNX4-203ENST00000471751 KRTAP6-3Q3LI67 103 aa7.81□□□□□ -1.16
SNX4-203ENST00000471751 NEBP20929 6669 aa7.73□□□□□ -1.17
SNX4-203ENST00000471751 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
SNX4-203ENST00000471751 TNP1P09430 55 aa7.6□□□□□ -1.19
SNX4-203ENST00000471751 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
SNX4-203ENST00000471751 PRO0628Q9UI54 55 aa7.57□□□□□ -1.2
SNX4-203ENST00000471751 ROMO1P60602 79 aa7.56□□□□□ -1.2
SNX4-203ENST00000471751 KRTAP25-1Q3LHN0 102 aa7.54□□□□□ -1.2
SNX4-203ENST00000471751 KRTAP10-7P60409 375 aaPredicted RBP7.52□□□□□ -1.21
SNX4-203ENST00000471751 KRTAP20-1Q3LI63 56 aa7.52□□□□□ -1.21
SNX4-203ENST00000471751 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
SNX4-203ENST00000471751 PMAIP1Q13794 54 aa7.46□□□□□ -1.22
SNX4-203ENST00000471751 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.22
SNX4-203ENST00000471751 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
SNX4-203ENST00000471751 KMT2DO14686 5537 aa7.28□□□□□ -1.24
SNX4-203ENST00000471751 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.24
SNX4-203ENST00000471751 PP632Q6XCG6 107 aa7.27□□□□□ -1.24
SNX4-203ENST00000471751 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.24
SNX4-203ENST00000471751 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.24
SNX4-203ENST00000471751 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
SNX4-203ENST00000471751 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
SNX4-203ENST00000471751 MDN1Q9NU22 5596 aa7.23□□□□□ -1.25
SNX4-203ENST00000471751 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
SNX4-203ENST00000471751 SPRR2FQ96RM1 72 aa7.19□□□□□ -1.26
SNX4-203ENST00000471751 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
SNX4-203ENST00000471751 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
SNX4-203ENST00000471751 SPRR2EP22531 72 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms