RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
SF3A1-206ENST00000471037 MT1FP04733 61 aa4.53□□□□□ -1.68
SF3A1-206ENST00000471037 HRES1P13985 223 aa4.53□□□□□ -1.68
SF3A1-206ENST00000471037 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
SF3A1-206ENST00000471037 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
SF3A1-206ENST00000471037 MPLKIPQ8TAP9 179 aa4.5□□□□□ -1.69
SF3A1-206ENST00000471037 RBM12B-AS1Q9P1G2 102 aa4.5□□□□□ -1.69
SF3A1-206ENST00000471037 NDUFC1O43677 76 aa4.49□□□□□ -1.69
SF3A1-206ENST00000471037 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
SF3A1-206ENST00000471037 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
SF3A1-206ENST00000471037 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
SF3A1-206ENST00000471037 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
SF3A1-206ENST00000471037 C4orf26Q17RF5 130 aa4.47□□□□□ -1.69
SF3A1-206ENST00000471037 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
SF3A1-206ENST00000471037 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
SF3A1-206ENST00000471037 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
SF3A1-206ENST00000471037 H7BZZ5 65 aa4.44□□□□□ -1.7
SF3A1-206ENST00000471037 PCP4P48539 62 aa4.44□□□□□ -1.7
SF3A1-206ENST00000471037 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
SF3A1-206ENST00000471037 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
SF3A1-206ENST00000471037 A8MUN3 132 aa4.43□□□□□ -1.7
SF3A1-206ENST00000471037 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
SF3A1-206ENST00000471037 CYSTM1Q9H1C7 97 aa4.43□□□□□ -1.7
SF3A1-206ENST00000471037 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SF3A1-206ENST00000471037 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
SF3A1-206ENST00000471037 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
SF3A1-206ENST00000471037 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
SF3A1-206ENST00000471037 ACYP2P14621 99 aa4.37□□□□□ -1.71
SF3A1-206ENST00000471037 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
SF3A1-206ENST00000471037 TMEM258P61165 79 aa4.37□□□□□ -1.71
SF3A1-206ENST00000471037 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
SF3A1-206ENST00000471037 S4R3F8 94 aa4.34□□□□□ -1.71
SF3A1-206ENST00000471037 LCA10Q71F78 164 aa4.3□□□□□ -1.72
SF3A1-206ENST00000471037 CHKB-CPT1BH3BT56 60 aa4.29□□□□□ -1.72
SF3A1-206ENST00000471037 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
SF3A1-206ENST00000471037 COA5Q86WW8 74 aa4.28□□□□□ -1.72
SF3A1-206ENST00000471037 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
SF3A1-206ENST00000471037 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
SF3A1-206ENST00000471037 SERP1Q9Y6X1 66 aa4.23□□□□□ -1.73
SF3A1-206ENST00000471037 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
SF3A1-206ENST00000471037 NEBP20929 6669 aa4.19□□□□□ -1.74
SF3A1-206ENST00000471037 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
SF3A1-206ENST00000471037 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
SF3A1-206ENST00000471037 H0YAA0 97 aa4.17□□□□□ -1.74
SF3A1-206ENST00000471037 RPS28P62857 69 aaKnown RBP4.16□□□□□ -1.74
SF3A1-206ENST00000471037 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
SF3A1-206ENST00000471037 A6NN06 94 aa4.12□□□□□ -1.75
SF3A1-206ENST00000471037 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
SF3A1-206ENST00000471037 ADM2Q7Z4H4 148 aa4.11□□□□□ -1.75
SF3A1-206ENST00000471037 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
SF3A1-206ENST00000471037 MT1BP07438 61 aa4.1□□□□□ -1.75
SF3A1-206ENST00000471037 SEC61GP60059 68 aa4.1□□□□□ -1.75
SF3A1-206ENST00000471037 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
SF3A1-206ENST00000471037 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
SF3A1-206ENST00000471037 V9GYY9 64 aa4.08□□□□□ -1.76
SF3A1-206ENST00000471037 A0A1B0GU69 56 aa4.07□□□□□ -1.76
SF3A1-206ENST00000471037 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
SF3A1-206ENST00000471037 Q5VV11 94 aa4.07□□□□□ -1.76
SF3A1-206ENST00000471037 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
SF3A1-206ENST00000471037 P0C880 135 aa4.05□□□□□ -1.76
SF3A1-206ENST00000471037 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
SF3A1-206ENST00000471037 Q1T7F1 81 aa4.05□□□□□ -1.76
SF3A1-206ENST00000471037 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
SF3A1-206ENST00000471037 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
SF3A1-206ENST00000471037 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
SF3A1-206ENST00000471037 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
SF3A1-206ENST00000471037 KMT2DO14686 5537 aa4.02□□□□□ -1.77
SF3A1-206ENST00000471037 MDN1Q9NU22 5596 aa4□□□□□ -1.77
SF3A1-206ENST00000471037 R4GN34 69 aa3.99□□□□□ -1.77
SF3A1-206ENST00000471037 A0A1B0GU33 70 aa3.98□□□□□ -1.77
SF3A1-206ENST00000471037 M0QZ58 72 aa3.98□□□□□ -1.77
SF3A1-206ENST00000471037 PSPHP1O15172 72 aa3.96□□□□□ -1.78
SF3A1-206ENST00000471037 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
SF3A1-206ENST00000471037 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SF3A1-206ENST00000471037 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SF3A1-206ENST00000471037 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
SF3A1-206ENST00000471037 UQCR11O14957 56 aa3.92□□□□□ -1.78
SF3A1-206ENST00000471037 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
SF3A1-206ENST00000471037 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
SF3A1-206ENST00000471037 LINC01554Q52M75 96 aa3.88□□□□□ -1.79
SF3A1-206ENST00000471037 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
SF3A1-206ENST00000471037 A6NED7 52 aa3.86□□□□□ -1.79
SF3A1-206ENST00000471037 SPRR2EP22531 72 aa3.86□□□□□ -1.79
SF3A1-206ENST00000471037 SPRR2BP35325 72 aa3.86□□□□□ -1.79
SF3A1-206ENST00000471037 SPRR2AP35326 72 aa3.86□□□□□ -1.79
SF3A1-206ENST00000471037 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
SF3A1-206ENST00000471037 A0A0D9SG42 100 aa3.84□□□□□ -1.79
SF3A1-206ENST00000471037 A8MU10 97 aa3.81□□□□□ -1.8
SF3A1-206ENST00000471037 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
SF3A1-206ENST00000471037 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
SF3A1-206ENST00000471037 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
SF3A1-206ENST00000471037 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
SF3A1-206ENST00000471037 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
SF3A1-206ENST00000471037 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
SF3A1-206ENST00000471037 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SF3A1-206ENST00000471037 MT1XP80297 61 aa3.79□□□□□ -1.8
SF3A1-206ENST00000471037 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
SF3A1-206ENST00000471037 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
SF3A1-206ENST00000471037 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
SF3A1-206ENST00000471037 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms