RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 M0R2T5 61 aa10.09□□□□□ -0.79
BRAF-202ENST00000469930 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
BRAF-202ENST00000469930 ACYP2P14621 99 aa10.08□□□□□ -0.8
BRAF-202ENST00000469930 LCA10Q71F78 164 aa10.05□□□□□ -0.8
BRAF-202ENST00000469930 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
BRAF-202ENST00000469930 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
BRAF-202ENST00000469930 LORP23490 312 aaPredicted RBP9.98□□□□□ -0.81
BRAF-202ENST00000469930 CSAG1Q6PB30 78 aa9.98□□□□□ -0.81
BRAF-202ENST00000469930 ATP5EP56381 51 aaPredicted RBP9.92□□□□□ -0.82
BRAF-202ENST00000469930 PCP4P48539 62 aa9.89□□□□□ -0.83
BRAF-202ENST00000469930 TMEM258P61165 79 aa9.89□□□□□ -0.83
BRAF-202ENST00000469930 KRTAP9-8Q9BYQ0 159 aa9.88□□□□□ -0.83
BRAF-202ENST00000469930 CHKB-CPT1BH3BT56 60 aa9.83□□□□□ -0.84
BRAF-202ENST00000469930 SPTSSBQ8NFR3 76 aa9.83□□□□□ -0.84
BRAF-202ENST00000469930 FSIP2Q5CZC0 6907 aa9.83□□□□□ -0.84
BRAF-202ENST00000469930 COA5Q86WW8 74 aa9.82□□□□□ -0.84
BRAF-202ENST00000469930 CRCT1Q9UGL9 99 aa9.82□□□□□ -0.84
BRAF-202ENST00000469930 H0YAA0 97 aa9.78□□□□□ -0.84
BRAF-202ENST00000469930 MT2AP02795 61 aa9.77□□□□□ -0.85
BRAF-202ENST00000469930 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
BRAF-202ENST00000469930 MT1FP04733 61 aa9.69□□□□□ -0.86
BRAF-202ENST00000469930 KRTAP10-10P60014 251 aa9.65□□□□□ -0.86
BRAF-202ENST00000469930 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
BRAF-202ENST00000469930 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
BRAF-202ENST00000469930 KRTAP9-3Q9BYQ3 159 aa9.55□□□□□ -0.88
BRAF-202ENST00000469930 CRIPTQ9P021 101 aa9.53□□□□□ -0.88
BRAF-202ENST00000469930 P0C880 135 aa9.45□□□□□ -0.9
BRAF-202ENST00000469930 SPRR2GQ9BYE4 73 aa9.42□□□□□ -0.9
BRAF-202ENST00000469930 RPS28P62857 69 aaKnown RBP9.41□□□□□ -0.9
BRAF-202ENST00000469930 SEC61GP60059 68 aa9.4□□□□□ -0.9
BRAF-202ENST00000469930 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
BRAF-202ENST00000469930 LINC01558Q9Y6Z2 57 aa9.35□□□□□ -0.91
BRAF-202ENST00000469930 LCE2BO14633 110 aa9.32□□□□□ -0.92
BRAF-202ENST00000469930 A0A1B0GU69 56 aa9.3□□□□□ -0.92
BRAF-202ENST00000469930 R4GN34 69 aa9.29□□□□□ -0.92
BRAF-202ENST00000469930 M0QZ58 72 aa9.28□□□□□ -0.92
BRAF-202ENST00000469930 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
BRAF-202ENST00000469930 KRTAP19-8Q3LI54 63 aa9.25□□□□□ -0.93
BRAF-202ENST00000469930 PRR15LQ9BU68 103 aa9.25□□□□□ -0.93
BRAF-202ENST00000469930 V9GYY9 64 aa9.25□□□□□ -0.93
BRAF-202ENST00000469930 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
BRAF-202ENST00000469930 Q1T7F1 81 aa9.22□□□□□ -0.93
BRAF-202ENST00000469930 A0A1B0GU33 70 aa9.18□□□□□ -0.94
BRAF-202ENST00000469930 Q5VV11 94 aa9.18□□□□□ -0.94
BRAF-202ENST00000469930 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.17□□□□□ -0.94
BRAF-202ENST00000469930 MT1BP07438 61 aa9.11□□□□□ -0.95
BRAF-202ENST00000469930 USH2AO75445 5202 aa9.1□□□□□ -0.95
BRAF-202ENST00000469930 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
BRAF-202ENST00000469930 A6NN06 94 aa9.04□□□□□ -0.96
BRAF-202ENST00000469930 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
BRAF-202ENST00000469930 SPATA8Q6RVD6 105 aa8.99□□□□□ -0.97
BRAF-202ENST00000469930 UQCR11O14957 56 aa8.97□□□□□ -0.97
BRAF-202ENST00000469930 PSPHP1O15172 72 aa8.96□□□□□ -0.98
BRAF-202ENST00000469930 KRTAP19-6Q3LI70 58 aa8.94□□□□□ -0.98
BRAF-202ENST00000469930 PLAC4Q8WY50 150 aa8.94□□□□□ -0.98
BRAF-202ENST00000469930 SSPOA2VEC9 5147 aa8.89□□□□□ -0.99
BRAF-202ENST00000469930 A0A0D9SG42 100 aa8.83□□□□□ -1
BRAF-202ENST00000469930 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
BRAF-202ENST00000469930 FCGBPQ9Y6R7 5405 aaPredicted RBP8.78□□□□□ -1
BRAF-202ENST00000469930 A8MU10 97 aa8.78□□□□□ -1
BRAF-202ENST00000469930 KRTAP10-5P60370 271 aa8.78□□□□□ -1
BRAF-202ENST00000469930 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
BRAF-202ENST00000469930 A6NED7 52 aa8.72□□□□□ -1.01
BRAF-202ENST00000469930 MT1XP80297 61 aa8.7□□□□□ -1.02
BRAF-202ENST00000469930 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
BRAF-202ENST00000469930 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
BRAF-202ENST00000469930 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
BRAF-202ENST00000469930 SYNE2Q8WXH0 6885 aaKnown RBP8.67□□□□□ -1.02
BRAF-202ENST00000469930 MACF1Q9UPN3 7388 aaKnown RBP8.65□□□□□ -1.02
BRAF-202ENST00000469930 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
BRAF-202ENST00000469930 CDC42SE1Q9NRR8 79 aa8.56□□□□□ -1.04
BRAF-202ENST00000469930 K7ERS5 55 aa8.51□□□□□ -1.05
BRAF-202ENST00000469930 KRTAP6-3Q3LI67 103 aa8.35□□□□□ -1.07
BRAF-202ENST00000469930 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
BRAF-202ENST00000469930 KRTAP10-12P60413 245 aa8.31□□□□□ -1.08
BRAF-202ENST00000469930 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
BRAF-202ENST00000469930 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
BRAF-202ENST00000469930 TNP1P09430 55 aa8.18□□□□□ -1.1
BRAF-202ENST00000469930 NEBP20929 6669 aa8.16□□□□□ -1.1
BRAF-202ENST00000469930 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
BRAF-202ENST00000469930 ROMO1P60602 79 aa8.07□□□□□ -1.12
BRAF-202ENST00000469930 KRTAP4-8A0A0G2JLE6 195 aa8.06□□□□□ -1.12
BRAF-202ENST00000469930 KRTAP4-8Q9BYQ9 185 aa8.06□□□□□ -1.12
BRAF-202ENST00000469930 KRTAP20-1Q3LI63 56 aa8.04□□□□□ -1.12
BRAF-202ENST00000469930 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
BRAF-202ENST00000469930 MUC12Q9UKN1 5478 aa7.98□□□□□ -1.13
BRAF-202ENST00000469930 KRTAP5-9P26371 169 aa7.97□□□□□ -1.13
BRAF-202ENST00000469930 KMT2DO14686 5537 aa7.97□□□□□ -1.13
BRAF-202ENST00000469930 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
BRAF-202ENST00000469930 PRO0628Q9UI54 55 aa7.89□□□□□ -1.15
BRAF-202ENST00000469930 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
BRAF-202ENST00000469930 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
BRAF-202ENST00000469930 SPRR2FQ96RM1 72 aa7.79□□□□□ -1.16
BRAF-202ENST00000469930 KRTAP19-7Q3SYF9 63 aa7.77□□□□□ -1.17
BRAF-202ENST00000469930 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
BRAF-202ENST00000469930 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
BRAF-202ENST00000469930 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
BRAF-202ENST00000469930 MT1EP04732 61 aa7.66□□□□□ -1.18
BRAF-202ENST00000469930 KRTAP2-3P0C7H8 128 aa7.66□□□□□ -1.18
BRAF-202ENST00000469930 KRTAP2-4Q9BYR9 128 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms