RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
MSH5-214ENST00000468602 MT1HP80294 61 aa5.61□□□□□ -1.51
MSH5-214ENST00000468602 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
MSH5-214ENST00000468602 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
MSH5-214ENST00000468602 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
MSH5-214ENST00000468602 A8MUN3 132 aa5.57□□□□□ -1.52
MSH5-214ENST00000468602 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
MSH5-214ENST00000468602 SPANXA2-OT1Q8N9U9 137 aa5.51□□□□□ -1.53
MSH5-214ENST00000468602 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
MSH5-214ENST00000468602 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
MSH5-214ENST00000468602 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
MSH5-214ENST00000468602 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
MSH5-214ENST00000468602 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
MSH5-214ENST00000468602 M0R2T5 61 aa5.42□□□□□ -1.54
MSH5-214ENST00000468602 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
MSH5-214ENST00000468602 S4R3F8 94 aa5.42□□□□□ -1.54
MSH5-214ENST00000468602 LCA10Q71F78 164 aa5.41□□□□□ -1.54
MSH5-214ENST00000468602 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
MSH5-214ENST00000468602 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
MSH5-214ENST00000468602 ACYP2P14621 99 aa5.39□□□□□ -1.55
MSH5-214ENST00000468602 CSAG1Q6PB30 78 aa5.38□□□□□ -1.55
MSH5-214ENST00000468602 H0YAA0 97 aa5.34□□□□□ -1.55
MSH5-214ENST00000468602 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.56
MSH5-214ENST00000468602 USH2AO75445 5202 aa5.32□□□□□ -1.56
MSH5-214ENST00000468602 MT2AP02795 61 aa5.32□□□□□ -1.56
MSH5-214ENST00000468602 V9GYY9 64 aa5.31□□□□□ -1.56
MSH5-214ENST00000468602 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
MSH5-214ENST00000468602 COA5Q86WW8 74 aa5.3□□□□□ -1.56
MSH5-214ENST00000468602 Q1T7F1 81 aa5.27□□□□□ -1.57
MSH5-214ENST00000468602 MT1FP04733 61 aa5.26□□□□□ -1.57
MSH5-214ENST00000468602 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
MSH5-214ENST00000468602 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
MSH5-214ENST00000468602 CHKB-CPT1BH3BT56 60 aa5.22□□□□□ -1.57
MSH5-214ENST00000468602 NEBP20929 6669 aa5.21□□□□□ -1.58
MSH5-214ENST00000468602 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
MSH5-214ENST00000468602 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
MSH5-214ENST00000468602 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.59
MSH5-214ENST00000468602 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
MSH5-214ENST00000468602 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
MSH5-214ENST00000468602 PSPHP1O15172 72 aa5.12□□□□□ -1.59
MSH5-214ENST00000468602 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
MSH5-214ENST00000468602 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
MSH5-214ENST00000468602 PRR15LQ9BU68 103 aa5.12□□□□□ -1.59
MSH5-214ENST00000468602 LCE2BO14633 110 aa5.08□□□□□ -1.6
MSH5-214ENST00000468602 P0C880 135 aa5.08□□□□□ -1.6
MSH5-214ENST00000468602 Q5VV11 94 aa5.08□□□□□ -1.6
MSH5-214ENST00000468602 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
MSH5-214ENST00000468602 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
MSH5-214ENST00000468602 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
MSH5-214ENST00000468602 SEC61GP60059 68 aa5.05□□□□□ -1.6
MSH5-214ENST00000468602 A0A1B0GU69 56 aa5.04□□□□□ -1.6
MSH5-214ENST00000468602 A6NED7 52 aa5.02□□□□□ -1.61
MSH5-214ENST00000468602 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
MSH5-214ENST00000468602 M0QZ58 72 aa5.01□□□□□ -1.61
MSH5-214ENST00000468602 R4GN34 69 aa4.99□□□□□ -1.61
MSH5-214ENST00000468602 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
MSH5-214ENST00000468602 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
MSH5-214ENST00000468602 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
MSH5-214ENST00000468602 MT1BP07438 61 aa4.95□□□□□ -1.62
MSH5-214ENST00000468602 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
MSH5-214ENST00000468602 A6NN06 94 aa4.93□□□□□ -1.62
MSH5-214ENST00000468602 UQCR11O14957 56 aa4.93□□□□□ -1.62
MSH5-214ENST00000468602 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
MSH5-214ENST00000468602 A0A1B0GU33 70 aa4.9□□□□□ -1.63
MSH5-214ENST00000468602 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
MSH5-214ENST00000468602 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
MSH5-214ENST00000468602 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
MSH5-214ENST00000468602 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.63
MSH5-214ENST00000468602 A8MU10 97 aa4.8□□□□□ -1.64
MSH5-214ENST00000468602 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
MSH5-214ENST00000468602 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
MSH5-214ENST00000468602 KMT2DO14686 5537 aa4.79□□□□□ -1.64
MSH5-214ENST00000468602 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
MSH5-214ENST00000468602 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
MSH5-214ENST00000468602 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
MSH5-214ENST00000468602 MT1XP80297 61 aa4.73□□□□□ -1.65
MSH5-214ENST00000468602 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
MSH5-214ENST00000468602 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
MSH5-214ENST00000468602 K7ERS5 55 aa4.7□□□□□ -1.66
MSH5-214ENST00000468602 A0A0D9SG42 100 aa4.67□□□□□ -1.66
MSH5-214ENST00000468602 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
MSH5-214ENST00000468602 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
MSH5-214ENST00000468602 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
MSH5-214ENST00000468602 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
MSH5-214ENST00000468602 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
MSH5-214ENST00000468602 CAMK2N1Q7Z7J9 78 aa4.59□□□□□ -1.67
MSH5-214ENST00000468602 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
MSH5-214ENST00000468602 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
MSH5-214ENST00000468602 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
MSH5-214ENST00000468602 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
MSH5-214ENST00000468602 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
MSH5-214ENST00000468602 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
MSH5-214ENST00000468602 ROMO1P60602 79 aa4.46□□□□□ -1.7
MSH5-214ENST00000468602 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
MSH5-214ENST00000468602 TNP1P09430 55 aa4.38□□□□□ -1.71
MSH5-214ENST00000468602 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
MSH5-214ENST00000468602 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
MSH5-214ENST00000468602 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
MSH5-214ENST00000468602 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
MSH5-214ENST00000468602 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms