RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
SNIP1-202ENST00000468040 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
SNIP1-202ENST00000468040 LCA10Q71F78 164 aa7.33□□□□□ -1.24
SNIP1-202ENST00000468040 NDUFC1O43677 76 aa7.32□□□□□ -1.24
SNIP1-202ENST00000468040 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
SNIP1-202ENST00000468040 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
SNIP1-202ENST00000468040 ACYP2P14621 99 aa7.27□□□□□ -1.25
SNIP1-202ENST00000468040 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
SNIP1-202ENST00000468040 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
SNIP1-202ENST00000468040 H7BZZ5 65 aa7.24□□□□□ -1.25
SNIP1-202ENST00000468040 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
SNIP1-202ENST00000468040 MT2AP02795 61 aa7.19□□□□□ -1.26
SNIP1-202ENST00000468040 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
SNIP1-202ENST00000468040 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
SNIP1-202ENST00000468040 MT1FP04733 61 aa7.14□□□□□ -1.27
SNIP1-202ENST00000468040 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
SNIP1-202ENST00000468040 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
SNIP1-202ENST00000468040 H0YAA0 97 aa7.08□□□□□ -1.28
SNIP1-202ENST00000468040 ATP5EP56381 51 aaPredicted RBP7.08□□□□□ -1.28
SNIP1-202ENST00000468040 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
SNIP1-202ENST00000468040 COA5Q86WW8 74 aa7.07□□□□□ -1.28
SNIP1-202ENST00000468040 TMEM258P61165 79 aa7.04□□□□□ -1.28
SNIP1-202ENST00000468040 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
SNIP1-202ENST00000468040 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
SNIP1-202ENST00000468040 PCP4P48539 62 aa6.96□□□□□ -1.3
SNIP1-202ENST00000468040 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
SNIP1-202ENST00000468040 P0C880 135 aa6.88□□□□□ -1.31
SNIP1-202ENST00000468040 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
SNIP1-202ENST00000468040 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
SNIP1-202ENST00000468040 SEC61GP60059 68 aa6.83□□□□□ -1.32
SNIP1-202ENST00000468040 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
SNIP1-202ENST00000468040 R4GN34 69 aa6.81□□□□□ -1.32
SNIP1-202ENST00000468040 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
SNIP1-202ENST00000468040 M0QZ58 72 aa6.76□□□□□ -1.33
SNIP1-202ENST00000468040 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
SNIP1-202ENST00000468040 A0A1B0GU69 56 aa6.73□□□□□ -1.33
SNIP1-202ENST00000468040 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
SNIP1-202ENST00000468040 Q5VV11 94 aa6.73□□□□□ -1.33
SNIP1-202ENST00000468040 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
SNIP1-202ENST00000468040 USH2AO75445 5202 aa6.7□□□□□ -1.34
SNIP1-202ENST00000468040 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
SNIP1-202ENST00000468040 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
SNIP1-202ENST00000468040 MT1BP07438 61 aa6.66□□□□□ -1.34
SNIP1-202ENST00000468040 A0A1B0GU33 70 aa6.64□□□□□ -1.35
SNIP1-202ENST00000468040 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
SNIP1-202ENST00000468040 RPS28P62857 69 aaKnown RBP6.61□□□□□ -1.35
SNIP1-202ENST00000468040 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
SNIP1-202ENST00000468040 V9GYY9 64 aa6.59□□□□□ -1.35
SNIP1-202ENST00000468040 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
SNIP1-202ENST00000468040 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
SNIP1-202ENST00000468040 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
SNIP1-202ENST00000468040 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
SNIP1-202ENST00000468040 Q1T7F1 81 aa6.54□□□□□ -1.36
SNIP1-202ENST00000468040 A6NN06 94 aa6.53□□□□□ -1.36
SNIP1-202ENST00000468040 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
SNIP1-202ENST00000468040 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
SNIP1-202ENST00000468040 A0A0D9SG42 100 aa6.45□□□□□ -1.38
SNIP1-202ENST00000468040 UQCR11O14957 56 aa6.44□□□□□ -1.38
SNIP1-202ENST00000468040 PSPHP1O15172 72 aa6.44□□□□□ -1.38
SNIP1-202ENST00000468040 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
SNIP1-202ENST00000468040 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
SNIP1-202ENST00000468040 A8MU10 97 aa6.37□□□□□ -1.39
SNIP1-202ENST00000468040 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
SNIP1-202ENST00000468040 MT1XP80297 61 aa6.36□□□□□ -1.39
SNIP1-202ENST00000468040 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
SNIP1-202ENST00000468040 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
SNIP1-202ENST00000468040 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
SNIP1-202ENST00000468040 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
SNIP1-202ENST00000468040 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
SNIP1-202ENST00000468040 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
SNIP1-202ENST00000468040 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
SNIP1-202ENST00000468040 A6NED7 52 aa6.27□□□□□ -1.41
SNIP1-202ENST00000468040 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
SNIP1-202ENST00000468040 K7ERS5 55 aa6.16□□□□□ -1.42
SNIP1-202ENST00000468040 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
SNIP1-202ENST00000468040 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
SNIP1-202ENST00000468040 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
SNIP1-202ENST00000468040 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
SNIP1-202ENST00000468040 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
SNIP1-202ENST00000468040 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
SNIP1-202ENST00000468040 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
SNIP1-202ENST00000468040 TNP1P09430 55 aa5.95□□□□□ -1.46
SNIP1-202ENST00000468040 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
SNIP1-202ENST00000468040 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
SNIP1-202ENST00000468040 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
SNIP1-202ENST00000468040 KMT2DO14686 5537 aa5.88□□□□□ -1.47
SNIP1-202ENST00000468040 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
SNIP1-202ENST00000468040 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
SNIP1-202ENST00000468040 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
SNIP1-202ENST00000468040 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
SNIP1-202ENST00000468040 ROMO1P60602 79 aa5.79□□□□□ -1.48
SNIP1-202ENST00000468040 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
SNIP1-202ENST00000468040 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
SNIP1-202ENST00000468040 NEBP20929 6669 aa5.69□□□□□ -1.5
SNIP1-202ENST00000468040 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
SNIP1-202ENST00000468040 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
SNIP1-202ENST00000468040 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
SNIP1-202ENST00000468040 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
SNIP1-202ENST00000468040 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
SNIP1-202ENST00000468040 SPRR2EP22531 72 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms