RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
CTNS-205ENST00000467663 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
CTNS-205ENST00000467663 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
CTNS-205ENST00000467663 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
CTNS-205ENST00000467663 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
CTNS-205ENST00000467663 ACYP2P14621 99 aa6.11□□□□□ -1.43
CTNS-205ENST00000467663 MPLKIPQ8TAP9 179 aa6.11□□□□□ -1.43
CTNS-205ENST00000467663 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
CTNS-205ENST00000467663 C4orf26Q17RF5 130 aa6.1□□□□□ -1.43
CTNS-205ENST00000467663 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
CTNS-205ENST00000467663 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
CTNS-205ENST00000467663 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
CTNS-205ENST00000467663 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
CTNS-205ENST00000467663 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
CTNS-205ENST00000467663 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
CTNS-205ENST00000467663 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
CTNS-205ENST00000467663 COA5Q86WW8 74 aa5.97□□□□□ -1.45
CTNS-205ENST00000467663 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
CTNS-205ENST00000467663 S4R3F8 94 aa5.92□□□□□ -1.46
CTNS-205ENST00000467663 MT2AP02795 61 aa5.88□□□□□ -1.47
CTNS-205ENST00000467663 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
CTNS-205ENST00000467663 LCA10Q71F78 164 aa5.86□□□□□ -1.47
CTNS-205ENST00000467663 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
CTNS-205ENST00000467663 V9GYY9 64 aa5.84□□□□□ -1.47
CTNS-205ENST00000467663 MT1FP04733 61 aa5.83□□□□□ -1.48
CTNS-205ENST00000467663 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
CTNS-205ENST00000467663 USH2AO75445 5202 aa5.78□□□□□ -1.48
CTNS-205ENST00000467663 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
CTNS-205ENST00000467663 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
CTNS-205ENST00000467663 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
CTNS-205ENST00000467663 Q1T7F1 81 aa5.77□□□□□ -1.49
CTNS-205ENST00000467663 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
CTNS-205ENST00000467663 H0YAA0 97 aa5.75□□□□□ -1.49
CTNS-205ENST00000467663 SEC61GP60059 68 aa5.75□□□□□ -1.49
CTNS-205ENST00000467663 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
CTNS-205ENST00000467663 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
CTNS-205ENST00000467663 A0A1B0GU69 56 aa5.7□□□□□ -1.5
CTNS-205ENST00000467663 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
CTNS-205ENST00000467663 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
CTNS-205ENST00000467663 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
CTNS-205ENST00000467663 FCGBPQ9Y6R7 5405 aaPredicted RBP5.62□□□□□ -1.51
CTNS-205ENST00000467663 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
CTNS-205ENST00000467663 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
CTNS-205ENST00000467663 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
CTNS-205ENST00000467663 PSPHP1O15172 72 aa5.56□□□□□ -1.52
CTNS-205ENST00000467663 A0A1B0GU33 70 aa5.55□□□□□ -1.52
CTNS-205ENST00000467663 UQCR11O14957 56 aa5.54□□□□□ -1.52
CTNS-205ENST00000467663 Q5VV11 94 aa5.54□□□□□ -1.52
CTNS-205ENST00000467663 M0QZ58 72 aa5.53□□□□□ -1.52
CTNS-205ENST00000467663 P0C880 135 aa5.52□□□□□ -1.53
CTNS-205ENST00000467663 R4GN34 69 aa5.47□□□□□ -1.53
CTNS-205ENST00000467663 A6NED7 52 aa5.46□□□□□ -1.54
CTNS-205ENST00000467663 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
CTNS-205ENST00000467663 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
CTNS-205ENST00000467663 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
CTNS-205ENST00000467663 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
CTNS-205ENST00000467663 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
CTNS-205ENST00000467663 A6NN06 94 aa5.35□□□□□ -1.55
CTNS-205ENST00000467663 MT1BP07438 61 aa5.35□□□□□ -1.55
CTNS-205ENST00000467663 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
CTNS-205ENST00000467663 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
CTNS-205ENST00000467663 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
CTNS-205ENST00000467663 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
CTNS-205ENST00000467663 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
CTNS-205ENST00000467663 K7ERS5 55 aa5.29□□□□□ -1.56
CTNS-205ENST00000467663 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
CTNS-205ENST00000467663 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
CTNS-205ENST00000467663 A0A0D9SG42 100 aa5.25□□□□□ -1.57
CTNS-205ENST00000467663 A8MU10 97 aa5.25□□□□□ -1.57
CTNS-205ENST00000467663 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
CTNS-205ENST00000467663 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
CTNS-205ENST00000467663 PLAC4Q8WY50 150 aa5.21□□□□□ -1.58
CTNS-205ENST00000467663 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
CTNS-205ENST00000467663 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
CTNS-205ENST00000467663 KRTAP12-2P59991 146 aa5.15□□□□□ -1.59
CTNS-205ENST00000467663 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
CTNS-205ENST00000467663 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
CTNS-205ENST00000467663 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
CTNS-205ENST00000467663 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
CTNS-205ENST00000467663 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
CTNS-205ENST00000467663 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
CTNS-205ENST00000467663 NEBP20929 6669 aa5.02□□□□□ -1.61
CTNS-205ENST00000467663 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
CTNS-205ENST00000467663 MT1XP80297 61 aa5□□□□□ -1.61
CTNS-205ENST00000467663 ROMO1P60602 79 aa4.97□□□□□ -1.61
CTNS-205ENST00000467663 KMT2DO14686 5537 aa4.96□□□□□ -1.62
CTNS-205ENST00000467663 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
CTNS-205ENST00000467663 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
CTNS-205ENST00000467663 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
CTNS-205ENST00000467663 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
CTNS-205ENST00000467663 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
CTNS-205ENST00000467663 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
CTNS-205ENST00000467663 TNP1P09430 55 aa4.88□□□□□ -1.63
CTNS-205ENST00000467663 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
CTNS-205ENST00000467663 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
CTNS-205ENST00000467663 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
CTNS-205ENST00000467663 SPRR2EP22531 72 aa4.82□□□□□ -1.64
CTNS-205ENST00000467663 SPRR2BP35325 72 aa4.82□□□□□ -1.64
CTNS-205ENST00000467663 SPRR2AP35326 72 aa4.82□□□□□ -1.64
CTNS-205ENST00000467663 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms