RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
HDLBP-231ENST00000467435 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
HDLBP-231ENST00000467435 S4R3F8 94 aa6.17□□□□□ -1.42
HDLBP-231ENST00000467435 PSPHP1O15172 72 aa6.16□□□□□ -1.42
HDLBP-231ENST00000467435 LCA10Q71F78 164 aa6.14□□□□□ -1.43
HDLBP-231ENST00000467435 Q5VV11 94 aa6.11□□□□□ -1.43
HDLBP-231ENST00000467435 A0A1B0GU69 56 aa6.1□□□□□ -1.43
HDLBP-231ENST00000467435 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
HDLBP-231ENST00000467435 SEC61GP60059 68 aa6.04□□□□□ -1.44
HDLBP-231ENST00000467435 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
HDLBP-231ENST00000467435 A6NED7 52 aa5.99□□□□□ -1.45
HDLBP-231ENST00000467435 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
HDLBP-231ENST00000467435 BRK1Q8WUW1 75 aa5.96□□□□□ -1.46
HDLBP-231ENST00000467435 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.46
HDLBP-231ENST00000467435 UQCR11O14957 56 aa5.9□□□□□ -1.46
HDLBP-231ENST00000467435 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
HDLBP-231ENST00000467435 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
HDLBP-231ENST00000467435 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
HDLBP-231ENST00000467435 A0A1B0GU33 70 aa5.88□□□□□ -1.47
HDLBP-231ENST00000467435 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
HDLBP-231ENST00000467435 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
HDLBP-231ENST00000467435 H0YAA0 97 aa5.86□□□□□ -1.47
HDLBP-231ENST00000467435 A8MU10 97 aa5.85□□□□□ -1.47
HDLBP-231ENST00000467435 P0C880 135 aa5.85□□□□□ -1.47
HDLBP-231ENST00000467435 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
HDLBP-231ENST00000467435 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
HDLBP-231ENST00000467435 PRO0628Q9UI54 55 aa5.83□□□□□ -1.48
HDLBP-231ENST00000467435 MUC2Q02817 5179 aa5.83□□□□□ -1.48
HDLBP-231ENST00000467435 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
HDLBP-231ENST00000467435 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
HDLBP-231ENST00000467435 MT1HP80294 61 aa5.78□□□□□ -1.48
HDLBP-231ENST00000467435 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
HDLBP-231ENST00000467435 M0R2T5 61 aa5.74□□□□□ -1.49
HDLBP-231ENST00000467435 M0QZ58 72 aa5.7□□□□□ -1.5
HDLBP-231ENST00000467435 LORP23490 312 aaPredicted RBP5.67□□□□□ -1.5
HDLBP-231ENST00000467435 R4GN34 69 aa5.67□□□□□ -1.5
HDLBP-231ENST00000467435 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
HDLBP-231ENST00000467435 A0A0D9SG42 100 aa5.66□□□□□ -1.5
HDLBP-231ENST00000467435 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
HDLBP-231ENST00000467435 CRIPTQ9P021 101 aa5.6□□□□□ -1.51
HDLBP-231ENST00000467435 A6NN06 94 aa5.59□□□□□ -1.51
HDLBP-231ENST00000467435 K7ERS5 55 aa5.59□□□□□ -1.51
HDLBP-231ENST00000467435 LINC01554Q52M75 96 aa5.58□□□□□ -1.52
HDLBP-231ENST00000467435 MT2AP02795 61 aa5.57□□□□□ -1.52
HDLBP-231ENST00000467435 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
HDLBP-231ENST00000467435 MT1FP04733 61 aa5.54□□□□□ -1.52
HDLBP-231ENST00000467435 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
HDLBP-231ENST00000467435 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
HDLBP-231ENST00000467435 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
HDLBP-231ENST00000467435 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
HDLBP-231ENST00000467435 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
HDLBP-231ENST00000467435 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
HDLBP-231ENST00000467435 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
HDLBP-231ENST00000467435 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
HDLBP-231ENST00000467435 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
HDLBP-231ENST00000467435 ROMO1P60602 79 aa5.36□□□□□ -1.55
HDLBP-231ENST00000467435 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
HDLBP-231ENST00000467435 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
HDLBP-231ENST00000467435 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
HDLBP-231ENST00000467435 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
HDLBP-231ENST00000467435 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
HDLBP-231ENST00000467435 MT1BP07438 61 aa5.25□□□□□ -1.57
HDLBP-231ENST00000467435 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
HDLBP-231ENST00000467435 LCE2BO14633 110 aa5.2□□□□□ -1.58
HDLBP-231ENST00000467435 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
HDLBP-231ENST00000467435 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
HDLBP-231ENST00000467435 MT1XP80297 61 aa5.09□□□□□ -1.59
HDLBP-231ENST00000467435 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
HDLBP-231ENST00000467435 TNP1P09430 55 aa5.07□□□□□ -1.6
HDLBP-231ENST00000467435 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
HDLBP-231ENST00000467435 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
HDLBP-231ENST00000467435 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
HDLBP-231ENST00000467435 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
HDLBP-231ENST00000467435 USH2AO75445 5202 aa4.93□□□□□ -1.62
HDLBP-231ENST00000467435 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
HDLBP-231ENST00000467435 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
HDLBP-231ENST00000467435 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
HDLBP-231ENST00000467435 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
HDLBP-231ENST00000467435 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
HDLBP-231ENST00000467435 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
HDLBP-231ENST00000467435 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
HDLBP-231ENST00000467435 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
HDLBP-231ENST00000467435 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
HDLBP-231ENST00000467435 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
HDLBP-231ENST00000467435 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
HDLBP-231ENST00000467435 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
HDLBP-231ENST00000467435 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
HDLBP-231ENST00000467435 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
HDLBP-231ENST00000467435 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
HDLBP-231ENST00000467435 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
HDLBP-231ENST00000467435 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
HDLBP-231ENST00000467435 KMT2DO14686 5537 aa4.52□□□□□ -1.69
HDLBP-231ENST00000467435 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
HDLBP-231ENST00000467435 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
HDLBP-231ENST00000467435 MT1EP04732 61 aa4.46□□□□□ -1.7
HDLBP-231ENST00000467435 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
HDLBP-231ENST00000467435 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
HDLBP-231ENST00000467435 MT1LQ93083 61 aa4.38□□□□□ -1.71
HDLBP-231ENST00000467435 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
HDLBP-231ENST00000467435 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms