RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
RTFDC1-205ENST00000466260 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
RTFDC1-205ENST00000466260 Q96NJ1 140 aa5.21□□□□□ -1.58
RTFDC1-205ENST00000466260 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
RTFDC1-205ENST00000466260 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
RTFDC1-205ENST00000466260 LOC101927531A0A1B0GV80 90 aa5.19□□□□□ -1.58
RTFDC1-205ENST00000466260 Q1T7F1 81 aa5.19□□□□□ -1.58
RTFDC1-205ENST00000466260 C4orf26Q17RF5 130 aa5.18□□□□□ -1.58
RTFDC1-205ENST00000466260 IGHV6-1A0A0B4J1U7 121 aa5.17□□□□□ -1.58
RTFDC1-205ENST00000466260 NDUFS5O43920 106 aa5.16□□□□□ -1.58
RTFDC1-205ENST00000466260 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
RTFDC1-205ENST00000466260 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
RTFDC1-205ENST00000466260 Q75L30 129 aa5.15□□□□□ -1.59
RTFDC1-205ENST00000466260 LINC00313P59037 77 aa5.13□□□□□ -1.59
RTFDC1-205ENST00000466260 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
RTFDC1-205ENST00000466260 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
RTFDC1-205ENST00000466260 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
RTFDC1-205ENST00000466260 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
RTFDC1-205ENST00000466260 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
RTFDC1-205ENST00000466260 A8MUU9 505 aa5.1□□□□□ -1.59
RTFDC1-205ENST00000466260 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
RTFDC1-205ENST00000466260 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
RTFDC1-205ENST00000466260 MT1HP80294 61 aa5.07□□□□□ -1.6
RTFDC1-205ENST00000466260 COA5Q86WW8 74 aa5.07□□□□□ -1.6
RTFDC1-205ENST00000466260 Q8N9P0 234 aaPredicted RBP5.07□□□□□ -1.6
RTFDC1-205ENST00000466260 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
RTFDC1-205ENST00000466260 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
RTFDC1-205ENST00000466260 ACYP2P14621 99 aa5.05□□□□□ -1.6
RTFDC1-205ENST00000466260 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
RTFDC1-205ENST00000466260 M0R2T5 61 aa5.04□□□□□ -1.6
RTFDC1-205ENST00000466260 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
RTFDC1-205ENST00000466260 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
RTFDC1-205ENST00000466260 CHKB-CPT1BH3BT56 60 aa4.98□□□□□ -1.61
RTFDC1-205ENST00000466260 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
RTFDC1-205ENST00000466260 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
RTFDC1-205ENST00000466260 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
RTFDC1-205ENST00000466260 PSPHP1O15172 72 aa4.97□□□□□ -1.61
RTFDC1-205ENST00000466260 Q5W150 140 aa4.97□□□□□ -1.61
RTFDC1-205ENST00000466260 A8MUN3 132 aa4.96□□□□□ -1.62
RTFDC1-205ENST00000466260 HRES1P13985 223 aa4.95□□□□□ -1.62
RTFDC1-205ENST00000466260 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
RTFDC1-205ENST00000466260 Q5VV11 94 aa4.95□□□□□ -1.62
RTFDC1-205ENST00000466260 C7orf65Q6ZTY9 151 aa4.93□□□□□ -1.62
RTFDC1-205ENST00000466260 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
RTFDC1-205ENST00000466260 A6NED7 52 aa4.92□□□□□ -1.62
RTFDC1-205ENST00000466260 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
RTFDC1-205ENST00000466260 SPINK7P58062 85 aa4.91□□□□□ -1.62
RTFDC1-205ENST00000466260 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
RTFDC1-205ENST00000466260 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
RTFDC1-205ENST00000466260 A0A1B0GU69 56 aa4.85□□□□□ -1.63
RTFDC1-205ENST00000466260 SEC61GP60059 68 aa4.83□□□□□ -1.64
RTFDC1-205ENST00000466260 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
RTFDC1-205ENST00000466260 UQCR11O14957 56 aa4.79□□□□□ -1.64
RTFDC1-205ENST00000466260 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
RTFDC1-205ENST00000466260 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
RTFDC1-205ENST00000466260 LCA10Q71F78 164 aa4.76□□□□□ -1.65
RTFDC1-205ENST00000466260 MT2AP02795 61 aa4.74□□□□□ -1.65
RTFDC1-205ENST00000466260 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
RTFDC1-205ENST00000466260 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
RTFDC1-205ENST00000466260 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
RTFDC1-205ENST00000466260 MT1FP04733 61 aa4.71□□□□□ -1.66
RTFDC1-205ENST00000466260 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
RTFDC1-205ENST00000466260 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
RTFDC1-205ENST00000466260 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
RTFDC1-205ENST00000466260 A6NN06 94 aa4.69□□□□□ -1.66
RTFDC1-205ENST00000466260 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
RTFDC1-205ENST00000466260 A8MU10 97 aa4.61□□□□□ -1.67
RTFDC1-205ENST00000466260 K7ERS5 55 aa4.6□□□□□ -1.67
RTFDC1-205ENST00000466260 S4R3F8 94 aa4.6□□□□□ -1.67
RTFDC1-205ENST00000466260 A0A1B0GU33 70 aa4.59□□□□□ -1.67
RTFDC1-205ENST00000466260 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
RTFDC1-205ENST00000466260 USH2AO75445 5202 aa4.56□□□□□ -1.68
RTFDC1-205ENST00000466260 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
RTFDC1-205ENST00000466260 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
RTFDC1-205ENST00000466260 H0YAA0 97 aa4.46□□□□□ -1.7
RTFDC1-205ENST00000466260 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
RTFDC1-205ENST00000466260 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
RTFDC1-205ENST00000466260 M0QZ58 72 aa4.37□□□□□ -1.71
RTFDC1-205ENST00000466260 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
RTFDC1-205ENST00000466260 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
RTFDC1-205ENST00000466260 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.71
RTFDC1-205ENST00000466260 MT1BP07438 61 aa4.33□□□□□ -1.72
RTFDC1-205ENST00000466260 ROMO1P60602 79 aa4.33□□□□□ -1.72
RTFDC1-205ENST00000466260 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
RTFDC1-205ENST00000466260 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
RTFDC1-205ENST00000466260 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
RTFDC1-205ENST00000466260 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
RTFDC1-205ENST00000466260 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
RTFDC1-205ENST00000466260 P0C880 135 aa4.25□□□□□ -1.73
RTFDC1-205ENST00000466260 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
RTFDC1-205ENST00000466260 A0A0D9SG42 100 aa4.23□□□□□ -1.73
RTFDC1-205ENST00000466260 R4GN34 69 aa4.22□□□□□ -1.73
RTFDC1-205ENST00000466260 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
RTFDC1-205ENST00000466260 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
RTFDC1-205ENST00000466260 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
RTFDC1-205ENST00000466260 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
RTFDC1-205ENST00000466260 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
RTFDC1-205ENST00000466260 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
RTFDC1-205ENST00000466260 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
RTFDC1-205ENST00000466260 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms