RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 HMCN2Q8NDA2 5059 aa9.62□□□□□ -0.87
LETM1-202ENST00000466175 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
LETM1-202ENST00000466175 LCA10Q71F78 164 aa9.6□□□□□ -0.87
LETM1-202ENST00000466175 SEC61GP60059 68 aa9.56□□□□□ -0.88
LETM1-202ENST00000466175 TPRXLQ17RH7 258 aa9.54□□□□□ -0.88
LETM1-202ENST00000466175 A8MU10 97 aa9.49□□□□□ -0.89
LETM1-202ENST00000466175 UQCR11O14957 56 aa9.49□□□□□ -0.89
LETM1-202ENST00000466175 LRP2P98164 4655 aa9.48□□□□□ -0.89
LETM1-202ENST00000466175 PMAIP1Q13794 54 aa9.46□□□□□ -0.89
LETM1-202ENST00000466175 SPATA8Q6RVD6 105 aa9.44□□□□□ -0.9
LETM1-202ENST00000466175 LPAP08519 4548 aa9.42□□□□□ -0.9
LETM1-202ENST00000466175 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
LETM1-202ENST00000466175 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
LETM1-202ENST00000466175 A6NN06 94 aa9.3□□□□□ -0.92
LETM1-202ENST00000466175 S4R3F8 94 aa9.3□□□□□ -0.92
LETM1-202ENST00000466175 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.92
LETM1-202ENST00000466175 KTN1-AS1Q86SY8 53 aa9.27□□□□□ -0.93
LETM1-202ENST00000466175 A0A1B0GU33 70 aa9.26□□□□□ -0.93
LETM1-202ENST00000466175 RBM12B-AS1Q9P1G2 102 aa9.25□□□□□ -0.93
LETM1-202ENST00000466175 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
LETM1-202ENST00000466175 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
LETM1-202ENST00000466175 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
LETM1-202ENST00000466175 H0YAA0 97 aa9.13□□□□□ -0.95
LETM1-202ENST00000466175 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
LETM1-202ENST00000466175 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
LETM1-202ENST00000466175 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.96
LETM1-202ENST00000466175 MUC2Q02817 5179 aa9.02□□□□□ -0.97
LETM1-202ENST00000466175 K7ERS5 55 aa8.96□□□□□ -0.98
LETM1-202ENST00000466175 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
LETM1-202ENST00000466175 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
LETM1-202ENST00000466175 P0C880 135 aa8.89□□□□□ -0.99
LETM1-202ENST00000466175 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
LETM1-202ENST00000466175 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
LETM1-202ENST00000466175 M0QZ58 72 aa8.81□□□□□ -1
LETM1-202ENST00000466175 A0A0D9SG42 100 aa8.73□□□□□ -1.01
LETM1-202ENST00000466175 KRTAP19-2Q3LHN2 52 aa8.73□□□□□ -1.01
LETM1-202ENST00000466175 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
LETM1-202ENST00000466175 PRAC1Q96KF2 57 aa8.7□□□□□ -1.02
LETM1-202ENST00000466175 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
LETM1-202ENST00000466175 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
LETM1-202ENST00000466175 ROMO1P60602 79 aa8.61□□□□□ -1.03
LETM1-202ENST00000466175 R4GN34 69 aa8.59□□□□□ -1.03
LETM1-202ENST00000466175 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
LETM1-202ENST00000466175 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
LETM1-202ENST00000466175 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
LETM1-202ENST00000466175 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.05
LETM1-202ENST00000466175 MT1HP80294 61 aa8.5□□□□□ -1.05
LETM1-202ENST00000466175 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
LETM1-202ENST00000466175 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
LETM1-202ENST00000466175 FLGP20930 4061 aaPredicted RBP8.4□□□□□ -1.07
LETM1-202ENST00000466175 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.07
LETM1-202ENST00000466175 M0R2T5 61 aa8.39□□□□□ -1.07
LETM1-202ENST00000466175 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
LETM1-202ENST00000466175 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
LETM1-202ENST00000466175 C10orf95Q9H7T3 257 aa8.08□□□□□ -1.12
LETM1-202ENST00000466175 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
LETM1-202ENST00000466175 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
LETM1-202ENST00000466175 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
LETM1-202ENST00000466175 MT2AP02795 61 aa8□□□□□ -1.13
LETM1-202ENST00000466175 MT1FP04733 61 aa7.95□□□□□ -1.14
LETM1-202ENST00000466175 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
LETM1-202ENST00000466175 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
LETM1-202ENST00000466175 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
LETM1-202ENST00000466175 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
LETM1-202ENST00000466175 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
LETM1-202ENST00000466175 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
LETM1-202ENST00000466175 TNP1P09430 55 aa7.81□□□□□ -1.16
LETM1-202ENST00000466175 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
LETM1-202ENST00000466175 CRCT1Q9UGL9 99 aa7.78□□□□□ -1.16
LETM1-202ENST00000466175 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
LETM1-202ENST00000466175 KRTAP23-1A1A580 65 aa7.77□□□□□ -1.17
LETM1-202ENST00000466175 LCE2BO14633 110 aa7.74□□□□□ -1.17
LETM1-202ENST00000466175 H3BS24 57 aa7.71□□□□□ -1.17
LETM1-202ENST00000466175 USH2AO75445 5202 aa7.64□□□□□ -1.19
LETM1-202ENST00000466175 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
LETM1-202ENST00000466175 MT1BP07438 61 aa7.59□□□□□ -1.19
LETM1-202ENST00000466175 SSPOA2VEC9 5147 aa7.54□□□□□ -1.2
LETM1-202ENST00000466175 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
LETM1-202ENST00000466175 MT1XP80297 61 aa7.45□□□□□ -1.22
LETM1-202ENST00000466175 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
LETM1-202ENST00000466175 KRTAP19-6Q3LI70 58 aa7.36□□□□□ -1.23
LETM1-202ENST00000466175 FCGBPQ9Y6R7 5405 aaPredicted RBP7.33□□□□□ -1.24
LETM1-202ENST00000466175 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
LETM1-202ENST00000466175 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
LETM1-202ENST00000466175 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
LETM1-202ENST00000466175 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.24□□□□□ -1.25
LETM1-202ENST00000466175 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
LETM1-202ENST00000466175 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.27
LETM1-202ENST00000466175 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
LETM1-202ENST00000466175 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
LETM1-202ENST00000466175 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
LETM1-202ENST00000466175 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
LETM1-202ENST00000466175 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
LETM1-202ENST00000466175 SYNE2Q8WXH0 6885 aaKnown RBP6.98□□□□□ -1.29
LETM1-202ENST00000466175 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
LETM1-202ENST00000466175 KRTAP6-3Q3LI67 103 aa6.81□□□□□ -1.32
LETM1-202ENST00000466175 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
LETM1-202ENST00000466175 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
LETM1-202ENST00000466175 A0A0A0MQY5 61 aa6.71□□□□□ -1.34
LETM1-202ENST00000466175 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms