RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
SSNA1-203ENST00000463511 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
SSNA1-203ENST00000463511 LINC00208Q96KT6 92 aa10.97□□□□□ -0.65
SSNA1-203ENST00000463511 KRTAP3-1Q9BYR8 98 aa10.97□□□□□ -0.65
SSNA1-203ENST00000463511 MP68P56378 58 aa10.95□□□□□ -0.66
SSNA1-203ENST00000463511 H3BPC8 53 aa10.88□□□□□ -0.67
SSNA1-203ENST00000463511 SMIM20Q8N5G0 67 aa10.87□□□□□ -0.67
SSNA1-203ENST00000463511 TRAV7A0A075B6U4 112 aa10.86□□□□□ -0.67
SSNA1-203ENST00000463511 KLKP1Q107X0 134 aa10.86□□□□□ -0.67
SSNA1-203ENST00000463511 S4R3F8 94 aa10.73□□□□□ -0.69
SSNA1-203ENST00000463511 LCA10Q71F78 164 aa10.69□□□□□ -0.7
SSNA1-203ENST00000463511 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
SSNA1-203ENST00000463511 A8MUN3 132 aa10.64□□□□□ -0.71
SSNA1-203ENST00000463511 KRTAP3-3Q9BYR6 98 aa10.62□□□□□ -0.71
SSNA1-203ENST00000463511 CSAG1Q6PB30 78 aa10.59□□□□□ -0.71
SSNA1-203ENST00000463511 SNURFQ9Y675 71 aa10.59□□□□□ -0.71
SSNA1-203ENST00000463511 A6NN06 94 aa10.57□□□□□ -0.72
SSNA1-203ENST00000463511 C20orf197Q8N268 126 aa10.56□□□□□ -0.72
SSNA1-203ENST00000463511 MUC12Q9UKN1 5478 aa10.56□□□□□ -0.72
SSNA1-203ENST00000463511 NEBP20929 6669 aa10.55□□□□□ -0.72
SSNA1-203ENST00000463511 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
SSNA1-203ENST00000463511 MT1BP07438 61 aa10.51□□□□□ -0.73
SSNA1-203ENST00000463511 COX7CP15954 63 aa10.49□□□□□ -0.73
SSNA1-203ENST00000463511 NDUFC1O43677 76 aa10.46□□□□□ -0.73
SSNA1-203ENST00000463511 Q5VV11 94 aa10.46□□□□□ -0.73
SSNA1-203ENST00000463511 KRTAP20-1Q3LI63 56 aa10.42□□□□□ -0.74
SSNA1-203ENST00000463511 KRTAP19-8Q3LI54 63 aa10.4□□□□□ -0.74
SSNA1-203ENST00000463511 SPRR2GQ9BYE4 73 aa10.38□□□□□ -0.75
SSNA1-203ENST00000463511 ACYP2P14621 99 aa10.37□□□□□ -0.75
SSNA1-203ENST00000463511 SPANXA2-OT1Q8N9U9 137 aa10.37□□□□□ -0.75
SSNA1-203ENST00000463511 KRTAP10-5P60370 271 aa10.36□□□□□ -0.75
SSNA1-203ENST00000463511 ANAPC13Q9BS18 74 aa10.36□□□□□ -0.75
SSNA1-203ENST00000463511 KRTAP5-9P26371 169 aa10.3□□□□□ -0.76
SSNA1-203ENST00000463511 CYSTM1Q9H1C7 97 aa10.28□□□□□ -0.76
SSNA1-203ENST00000463511 H0YAA0 97 aa10.25□□□□□ -0.77
SSNA1-203ENST00000463511 H7BZZ5 65 aa10.22□□□□□ -0.77
SSNA1-203ENST00000463511 KMT2DO14686 5537 aa10.21□□□□□ -0.78
SSNA1-203ENST00000463511 CCDC179H3BU77 68 aa10.18□□□□□ -0.78
SSNA1-203ENST00000463511 MDN1Q9NU22 5596 aa10.17□□□□□ -0.78
SSNA1-203ENST00000463511 ADM2Q7Z4H4 148 aa10.16□□□□□ -0.78
SSNA1-203ENST00000463511 CHKB-CPT1BH3BT56 60 aa10.15□□□□□ -0.78
SSNA1-203ENST00000463511 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
SSNA1-203ENST00000463511 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
SSNA1-203ENST00000463511 COA5Q86WW8 74 aa10.06□□□□□ -0.8
SSNA1-203ENST00000463511 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
SSNA1-203ENST00000463511 P0C880 135 aa10.03□□□□□ -0.8
SSNA1-203ENST00000463511 KRTAP2-3P0C7H8 128 aa10□□□□□ -0.81
SSNA1-203ENST00000463511 KRTAP2-4Q9BYR9 128 aa10□□□□□ -0.81
SSNA1-203ENST00000463511 SPRR2FQ96RM1 72 aa9.92□□□□□ -0.82
SSNA1-203ENST00000463511 SPRR2EP22531 72 aa9.88□□□□□ -0.83
SSNA1-203ENST00000463511 SPRR2BP35325 72 aa9.88□□□□□ -0.83
SSNA1-203ENST00000463511 SPRR2AP35326 72 aa9.88□□□□□ -0.83
SSNA1-203ENST00000463511 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
SSNA1-203ENST00000463511 R4GN34 69 aa9.83□□□□□ -0.84
SSNA1-203ENST00000463511 M0QZ58 72 aa9.8□□□□□ -0.84
SSNA1-203ENST00000463511 TMEM258P61165 79 aa9.78□□□□□ -0.84
SSNA1-203ENST00000463511 PRO2289Q9P1D8 64 aa9.77□□□□□ -0.85
SSNA1-203ENST00000463511 MT1XP80297 61 aa9.75□□□□□ -0.85
SSNA1-203ENST00000463511 KRTAP8-1Q8IUC2 63 aa9.72□□□□□ -0.85
SSNA1-203ENST00000463511 LCE1AQ5T7P2 110 aa9.67□□□□□ -0.86
SSNA1-203ENST00000463511 KRTAP2-2Q9BYT5 123 aa9.65□□□□□ -0.86
SSNA1-203ENST00000463511 KRTAP2-1Q9BYU5 128 aa9.65□□□□□ -0.86
SSNA1-203ENST00000463511 SEC61GP60059 68 aa9.64□□□□□ -0.87
SSNA1-203ENST00000463511 SERP1Q9Y6X1 66 aa9.64□□□□□ -0.87
SSNA1-203ENST00000463511 LINC01554Q52M75 96 aa9.62□□□□□ -0.87
SSNA1-203ENST00000463511 PLAC4Q8WY50 150 aa9.61□□□□□ -0.87
SSNA1-203ENST00000463511 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
SSNA1-203ENST00000463511 KRTAP12-2P59991 146 aa9.57□□□□□ -0.88
SSNA1-203ENST00000463511 SPRR2DP22532 72 aa9.56□□□□□ -0.88
SSNA1-203ENST00000463511 A0A1B0GU69 56 aa9.51□□□□□ -0.89
SSNA1-203ENST00000463511 PCP4P48539 62 aa9.51□□□□□ -0.89
SSNA1-203ENST00000463511 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
SSNA1-203ENST00000463511 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
SSNA1-203ENST00000463511 A0A1B0GU33 70 aa9.48□□□□□ -0.89
SSNA1-203ENST00000463511 LINC01558Q9Y6Z2 57 aa9.43□□□□□ -0.9
SSNA1-203ENST00000463511 SPATA8Q6RVD6 105 aa9.4□□□□□ -0.9
SSNA1-203ENST00000463511 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
SSNA1-203ENST00000463511 LCE3BQ5TA77 95 aa9.33□□□□□ -0.92
SSNA1-203ENST00000463511 KRTAP10-7P60409 375 aaPredicted RBP9.31□□□□□ -0.92
SSNA1-203ENST00000463511 A0A0D9SG42 100 aa9.3□□□□□ -0.92
SSNA1-203ENST00000463511 KRTAP10-12P60413 245 aa9.23□□□□□ -0.93
SSNA1-203ENST00000463511 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
SSNA1-203ENST00000463511 A8MU10 97 aa9.16□□□□□ -0.94
SSNA1-203ENST00000463511 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
SSNA1-203ENST00000463511 Q1T7F1 81 aa9.14□□□□□ -0.95
SSNA1-203ENST00000463511 V9GYY9 64 aa9.14□□□□□ -0.95
SSNA1-203ENST00000463511 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
SSNA1-203ENST00000463511 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
SSNA1-203ENST00000463511 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
SSNA1-203ENST00000463511 UQCR11O14957 56 aa9.07□□□□□ -0.96
SSNA1-203ENST00000463511 PSPHP1O15172 72 aa9.04□□□□□ -0.96
SSNA1-203ENST00000463511 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
SSNA1-203ENST00000463511 GPR98Q8WXG9 6306 aa8.86□□□□□ -0.99
SSNA1-203ENST00000463511 KRTAP4-9Q9BYQ8 210 aa8.82□□□□□ -1
SSNA1-203ENST00000463511 DSTQ03001 7570 aaKnown RBP8.82□□□□□ -1
SSNA1-203ENST00000463511 LCE5AQ5TCM9 118 aa8.77□□□□□ -1.01
SSNA1-203ENST00000463511 A6NED7 52 aa8.74□□□□□ -1.01
SSNA1-203ENST00000463511 C10orf95Q9H7T3 257 aa8.73□□□□□ -1.01
SSNA1-203ENST00000463511 KRTAP19-7Q3SYF9 63 aa8.71□□□□□ -1.02
SSNA1-203ENST00000463511 KRTAP19-3Q7Z4W3 81 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms