RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
SF1-212ENST00000463343 KLKP1Q107X0 134 aa8.34□□□□□ -1.07
SF1-212ENST00000463343 LCA10Q71F78 164 aa8.33□□□□□ -1.08
SF1-212ENST00000463343 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
SF1-212ENST00000463343 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
SF1-212ENST00000463343 H3BPC8 53 aa8.3□□□□□ -1.08
SF1-212ENST00000463343 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
SF1-212ENST00000463343 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
SF1-212ENST00000463343 FAM236AA0A1B0GUQ0 79 aa8.26□□□□□ -1.09
SF1-212ENST00000463343 FAM236BA0A1B0GV22 79 aa8.26□□□□□ -1.09
SF1-212ENST00000463343 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
SF1-212ENST00000463343 A8MUN3 132 aa8.21□□□□□ -1.1
SF1-212ENST00000463343 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
SF1-212ENST00000463343 KRTAP6-3Q3LI67 103 aa8.16□□□□□ -1.1
SF1-212ENST00000463343 NDUFC1O43677 76 aa8.12□□□□□ -1.11
SF1-212ENST00000463343 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
SF1-212ENST00000463343 SERP2Q8N6R1 65 aa8.04□□□□□ -1.12
SF1-212ENST00000463343 SNURFQ9Y675 71 aa8.03□□□□□ -1.12
SF1-212ENST00000463343 H0YAA0 97 aa7.98□□□□□ -1.13
SF1-212ENST00000463343 C20orf197Q8N268 126 aa7.98□□□□□ -1.13
SF1-212ENST00000463343 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
SF1-212ENST00000463343 ACYP2P14621 99 aa7.94□□□□□ -1.14
SF1-212ENST00000463343 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
SF1-212ENST00000463343 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
SF1-212ENST00000463343 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
SF1-212ENST00000463343 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
SF1-212ENST00000463343 NEBP20929 6669 aa7.86□□□□□ -1.15
SF1-212ENST00000463343 MT1BP07438 61 aa7.86□□□□□ -1.15
SF1-212ENST00000463343 COX7CP15954 63 aa7.86□□□□□ -1.15
SF1-212ENST00000463343 Q5VV11 94 aa7.83□□□□□ -1.16
SF1-212ENST00000463343 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
SF1-212ENST00000463343 P0C880 135 aa7.8□□□□□ -1.16
SF1-212ENST00000463343 CHKB-CPT1BH3BT56 60 aa7.77□□□□□ -1.17
SF1-212ENST00000463343 A6NN06 94 aa7.76□□□□□ -1.17
SF1-212ENST00000463343 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
SF1-212ENST00000463343 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
SF1-212ENST00000463343 CYSTM1Q9H1C7 97 aa7.73□□□□□ -1.17
SF1-212ENST00000463343 ANAPC13Q9BS18 74 aa7.71□□□□□ -1.18
SF1-212ENST00000463343 H7BZZ5 65 aa7.69□□□□□ -1.18
SF1-212ENST00000463343 KRTAP20-1Q3LI63 56 aa7.68□□□□□ -1.18
SF1-212ENST00000463343 R4GN34 69 aa7.67□□□□□ -1.18
SF1-212ENST00000463343 KRTAP5-9P26371 169 aa7.65□□□□□ -1.18
SF1-212ENST00000463343 M0QZ58 72 aa7.64□□□□□ -1.19
SF1-212ENST00000463343 COA5Q86WW8 74 aa7.64□□□□□ -1.19
SF1-212ENST00000463343 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
SF1-212ENST00000463343 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
SF1-212ENST00000463343 KMT2DO14686 5537 aa7.54□□□□□ -1.2
SF1-212ENST00000463343 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
SF1-212ENST00000463343 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
SF1-212ENST00000463343 MDN1Q9NU22 5596 aa7.51□□□□□ -1.21
SF1-212ENST00000463343 KRTAP2-3P0C7H8 128 aa7.43□□□□□ -1.22
SF1-212ENST00000463343 MT1XP80297 61 aa7.43□□□□□ -1.22
SF1-212ENST00000463343 KRTAP2-4Q9BYR9 128 aa7.43□□□□□ -1.22
SF1-212ENST00000463343 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
SF1-212ENST00000463343 SEC61GP60059 68 aa7.38□□□□□ -1.23
SF1-212ENST00000463343 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
SF1-212ENST00000463343 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
SF1-212ENST00000463343 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
SF1-212ENST00000463343 A0A1B0GU33 70 aa7.26□□□□□ -1.25
SF1-212ENST00000463343 TMEM258P61165 79 aa7.26□□□□□ -1.25
SF1-212ENST00000463343 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
SF1-212ENST00000463343 A0A1B0GU69 56 aa7.23□□□□□ -1.25
SF1-212ENST00000463343 SPRR2EP22531 72 aa7.23□□□□□ -1.25
SF1-212ENST00000463343 SPRR2BP35325 72 aa7.23□□□□□ -1.25
SF1-212ENST00000463343 SPRR2AP35326 72 aa7.23□□□□□ -1.25
SF1-212ENST00000463343 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
SF1-212ENST00000463343 A0A0D9SG42 100 aa7.18□□□□□ -1.26
SF1-212ENST00000463343 KRTAP2-2Q9BYT5 123 aa7.18□□□□□ -1.26
SF1-212ENST00000463343 KRTAP2-1Q9BYU5 128 aa7.18□□□□□ -1.26
SF1-212ENST00000463343 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
SF1-212ENST00000463343 LCE1AQ5T7P2 110 aa7.12□□□□□ -1.27
SF1-212ENST00000463343 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
SF1-212ENST00000463343 LINC01558Q9Y6Z2 57 aa7.11□□□□□ -1.27
SF1-212ENST00000463343 KRTAP10-7P60409 375 aaPredicted RBP7.09□□□□□ -1.27
SF1-212ENST00000463343 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
SF1-212ENST00000463343 KRTAP10-12P60413 245 aa7.06□□□□□ -1.28
SF1-212ENST00000463343 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
SF1-212ENST00000463343 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SF1-212ENST00000463343 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
SF1-212ENST00000463343 SPINT4Q6UDR6 99 aa7.05□□□□□ -1.28
SF1-212ENST00000463343 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
SF1-212ENST00000463343 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
SF1-212ENST00000463343 A8MU10 97 aa7.02□□□□□ -1.29
SF1-212ENST00000463343 SPRR2DP22532 72 aa7□□□□□ -1.29
SF1-212ENST00000463343 PCP4P48539 62 aa6.88□□□□□ -1.31
SF1-212ENST00000463343 UQCR11O14957 56 aa6.86□□□□□ -1.31
SF1-212ENST00000463343 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
SF1-212ENST00000463343 Q1T7F1 81 aa6.82□□□□□ -1.32
SF1-212ENST00000463343 V9GYY9 64 aa6.82□□□□□ -1.32
SF1-212ENST00000463343 PSPHP1O15172 72 aa6.77□□□□□ -1.33
SF1-212ENST00000463343 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
SF1-212ENST00000463343 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
SF1-212ENST00000463343 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
SF1-212ENST00000463343 GPR98Q8WXG9 6306 aa6.65□□□□□ -1.34
SF1-212ENST00000463343 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
SF1-212ENST00000463343 TNP1P09430 55 aa6.62□□□□□ -1.35
SF1-212ENST00000463343 MT1EP04732 61 aa6.56□□□□□ -1.36
SF1-212ENST00000463343 DSTQ03001 7570 aaKnown RBP6.56□□□□□ -1.36
SF1-212ENST00000463343 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
SF1-212ENST00000463343 A6NED7 52 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms