RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 C1orf64Q8NEQ6 169 aa9.15□□□□□ -0.94
VARS-221ENST00000463184 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
VARS-221ENST00000463184 FAM236AA0A1B0GUQ0 79 aa9.12□□□□□ -0.95
VARS-221ENST00000463184 FAM236BA0A1B0GV22 79 aa9.12□□□□□ -0.95
VARS-221ENST00000463184 H3BPC8 53 aa9.1□□□□□ -0.95
VARS-221ENST00000463184 KRTAP3-1Q9BYR8 98 aa9.1□□□□□ -0.95
VARS-221ENST00000463184 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
VARS-221ENST00000463184 NEBP20929 6669 aa9.06□□□□□ -0.96
VARS-221ENST00000463184 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
VARS-221ENST00000463184 A6NN06 94 aa9.04□□□□□ -0.96
VARS-221ENST00000463184 KLKP1Q107X0 134 aa9.01□□□□□ -0.97
VARS-221ENST00000463184 S4R3F8 94 aa8.97□□□□□ -0.97
VARS-221ENST00000463184 MUC12Q9UKN1 5478 aa8.96□□□□□ -0.97
VARS-221ENST00000463184 MT1BP07438 61 aa8.96□□□□□ -0.98
VARS-221ENST00000463184 Q5VV11 94 aa8.95□□□□□ -0.98
VARS-221ENST00000463184 A8MUN3 132 aa8.92□□□□□ -0.98
VARS-221ENST00000463184 KRTAP19-8Q3LI54 63 aa8.9□□□□□ -0.98
VARS-221ENST00000463184 KRTAP20-1Q3LI63 56 aa8.9□□□□□ -0.98
VARS-221ENST00000463184 LCA10Q71F78 164 aa8.9□□□□□ -0.98
VARS-221ENST00000463184 SPRR2GQ9BYE4 73 aa8.89□□□□□ -0.99
VARS-221ENST00000463184 SERP2Q8N6R1 65 aa8.88□□□□□ -0.99
VARS-221ENST00000463184 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
VARS-221ENST00000463184 KRTAP10-5P60370 271 aa8.85□□□□□ -0.99
VARS-221ENST00000463184 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
VARS-221ENST00000463184 KRTAP5-9P26371 169 aa8.81□□□□□ -1
VARS-221ENST00000463184 SNURFQ9Y675 71 aa8.8□□□□□ -1
VARS-221ENST00000463184 C20orf197Q8N268 126 aa8.78□□□□□ -1
VARS-221ENST00000463184 DMAC1Q96GE9 116 aa8.78□□□□□ -1
VARS-221ENST00000463184 NDUFC1O43677 76 aa8.76□□□□□ -1.01
VARS-221ENST00000463184 COX7CP15954 63 aa8.72□□□□□ -1.01
VARS-221ENST00000463184 KMT2DO14686 5537 aa8.68□□□□□ -1.02
VARS-221ENST00000463184 ACYP2P14621 99 aa8.67□□□□□ -1.02
VARS-221ENST00000463184 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
VARS-221ENST00000463184 MDN1Q9NU22 5596 aa8.64□□□□□ -1.03
VARS-221ENST00000463184 ANAPC13Q9BS18 74 aa8.62□□□□□ -1.03
VARS-221ENST00000463184 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
VARS-221ENST00000463184 H0YAA0 97 aa8.58□□□□□ -1.04
VARS-221ENST00000463184 KRTAP2-3P0C7H8 128 aa8.57□□□□□ -1.04
VARS-221ENST00000463184 KRTAP2-4Q9BYR9 128 aa8.57□□□□□ -1.04
VARS-221ENST00000463184 CHKB-CPT1BH3BT56 60 aa8.5□□□□□ -1.05
VARS-221ENST00000463184 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
VARS-221ENST00000463184 H7BZZ5 65 aa8.48□□□□□ -1.05
VARS-221ENST00000463184 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
VARS-221ENST00000463184 CYSTM1Q9H1C7 97 aa8.48□□□□□ -1.05
VARS-221ENST00000463184 SPRR2FQ96RM1 72 aa8.45□□□□□ -1.06
VARS-221ENST00000463184 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
VARS-221ENST00000463184 SPRR2EP22531 72 aa8.42□□□□□ -1.06
VARS-221ENST00000463184 SPRR2BP35325 72 aa8.42□□□□□ -1.06
VARS-221ENST00000463184 SPRR2AP35326 72 aa8.42□□□□□ -1.06
VARS-221ENST00000463184 PRO2289Q9P1D8 64 aa8.39□□□□□ -1.07
VARS-221ENST00000463184 COA5Q86WW8 74 aa8.37□□□□□ -1.07
VARS-221ENST00000463184 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
VARS-221ENST00000463184 P0C880 135 aa8.33□□□□□ -1.08
VARS-221ENST00000463184 MT1XP80297 61 aa8.31□□□□□ -1.08
VARS-221ENST00000463184 KRTAP8-1Q8IUC2 63 aa8.29□□□□□ -1.08
VARS-221ENST00000463184 KRTAP2-2Q9BYT5 123 aa8.28□□□□□ -1.08
VARS-221ENST00000463184 KRTAP2-1Q9BYU5 128 aa8.28□□□□□ -1.08
VARS-221ENST00000463184 LCE1AQ5T7P2 110 aa8.25□□□□□ -1.09
VARS-221ENST00000463184 PLAC4Q8WY50 150 aa8.25□□□□□ -1.09
VARS-221ENST00000463184 R4GN34 69 aa8.24□□□□□ -1.09
VARS-221ENST00000463184 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
VARS-221ENST00000463184 KRTAP12-2P59991 146 aa8.21□□□□□ -1.1
VARS-221ENST00000463184 M0QZ58 72 aa8.19□□□□□ -1.1
VARS-221ENST00000463184 SPRR2DP22532 72 aa8.15□□□□□ -1.1
VARS-221ENST00000463184 TMEM258P61165 79 aa8.14□□□□□ -1.11
VARS-221ENST00000463184 SEC61GP60059 68 aa8.1□□□□□ -1.11
VARS-221ENST00000463184 SERP1Q9Y6X1 66 aa8.08□□□□□ -1.12
VARS-221ENST00000463184 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
VARS-221ENST00000463184 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
VARS-221ENST00000463184 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
VARS-221ENST00000463184 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
VARS-221ENST00000463184 A0A1B0GU69 56 aa7.94□□□□□ -1.14
VARS-221ENST00000463184 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
VARS-221ENST00000463184 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
VARS-221ENST00000463184 A0A1B0GU33 70 aa7.9□□□□□ -1.14
VARS-221ENST00000463184 KRTAP10-12P60413 245 aa7.9□□□□□ -1.14
VARS-221ENST00000463184 PCP4P48539 62 aa7.87□□□□□ -1.15
VARS-221ENST00000463184 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
VARS-221ENST00000463184 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
VARS-221ENST00000463184 SPATA8Q6RVD6 105 aa7.81□□□□□ -1.16
VARS-221ENST00000463184 A0A0D9SG42 100 aa7.74□□□□□ -1.17
VARS-221ENST00000463184 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
VARS-221ENST00000463184 V9GYY9 64 aa7.65□□□□□ -1.18
VARS-221ENST00000463184 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
VARS-221ENST00000463184 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
VARS-221ENST00000463184 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
VARS-221ENST00000463184 A8MU10 97 aa7.6□□□□□ -1.19
VARS-221ENST00000463184 Q1T7F1 81 aa7.6□□□□□ -1.19
VARS-221ENST00000463184 UQCR11O14957 56 aa7.58□□□□□ -1.2
VARS-221ENST00000463184 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
VARS-221ENST00000463184 GPR98Q8WXG9 6306 aa7.57□□□□□ -1.2
VARS-221ENST00000463184 DSTQ03001 7570 aaKnown RBP7.55□□□□□ -1.2
VARS-221ENST00000463184 PSPHP1O15172 72 aa7.51□□□□□ -1.21
VARS-221ENST00000463184 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
VARS-221ENST00000463184 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
VARS-221ENST00000463184 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
VARS-221ENST00000463184 KRTAP19-7Q3SYF9 63 aa7.42□□□□□ -1.22
VARS-221ENST00000463184 KRTAP19-3Q7Z4W3 81 aa7.42□□□□□ -1.22
VARS-221ENST00000463184 MT1EP04732 61 aa7.39□□□□□ -1.23
VARS-221ENST00000463184 A6NED7 52 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms