RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	FAM236A	A0A1B0GUQ0	79 aa		4.62	□□□□□ -1.67
PSMD4-208	ENST00000462970	FAM236B	A0A1B0GV22	79 aa		4.62	□□□□□ -1.67
PSMD4-208	ENST00000462970	MT1F	P04733	61 aa		4.62	□□□□□ -1.67
PSMD4-208	ENST00000462970	CYP4F30P	Q9H0H9	118 aa		4.62	□□□□□ -1.67
PSMD4-208	ENST00000462970	LOC101927531	A0A1B0GV80	90 aa		4.61	□□□□□ -1.67
PSMD4-208	ENST00000462970	ATOX1	O00244	68 aa		4.61	□□□□□ -1.67
PSMD4-208	ENST00000462970	RPS28	P62857	69 aa	Known RBP	4.6	□□□□□ -1.67
PSMD4-208	ENST00000462970	LCE3B	Q5TA77	95 aa		4.6	□□□□□ -1.67
PSMD4-208	ENST00000462970	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.59	□□□□□ -1.67
PSMD4-208	ENST00000462970	COX7C	P15954	63 aa		4.59	□□□□□ -1.67
PSMD4-208	ENST00000462970		S4R3F8	94 aa		4.59	□□□□□ -1.67
PSMD4-208	ENST00000462970	USH2A	O75445	5202 aa		4.58	□□□□□ -1.68
PSMD4-208	ENST00000462970	TMEM258	P61165	79 aa		4.57	□□□□□ -1.68
PSMD4-208	ENST00000462970	MP68	P56378	58 aa		4.56	□□□□□ -1.68
PSMD4-208	ENST00000462970	LINC00208	Q96KT6	92 aa		4.56	□□□□□ -1.68
PSMD4-208	ENST00000462970	SSPO	A2VEC9	5147 aa		4.55	□□□□□ -1.68
PSMD4-208	ENST00000462970	LCA10	Q71F78	164 aa		4.54	□□□□□ -1.68
PSMD4-208	ENST00000462970	OCR1	Q9BZK8	76 aa		4.54	□□□□□ -1.68
PSMD4-208	ENST00000462970	KRTAP9-7	A8MTY7	169 aa		4.53	□□□□□ -1.68
PSMD4-208	ENST00000462970	LCE4A	Q5TA78	99 aa		4.53	□□□□□ -1.68
PSMD4-208	ENST00000462970	CSAG1	Q6PB30	78 aa		4.53	□□□□□ -1.68
PSMD4-208	ENST00000462970	SERP2	Q8N6R1	65 aa		4.53	□□□□□ -1.68
PSMD4-208	ENST00000462970	KRTAP9-3	Q9BYQ3	159 aa		4.52	□□□□□ -1.69
PSMD4-208	ENST00000462970	KLKP1	Q107X0	134 aa		4.5	□□□□□ -1.69
PSMD4-208	ENST00000462970	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.47	□□□□□ -1.69
PSMD4-208	ENST00000462970		H3BPC8	53 aa		4.45	□□□□□ -1.7
PSMD4-208	ENST00000462970	SYNE2	Q8WXH0	6885 aa	Known RBP	4.45	□□□□□ -1.7
PSMD4-208	ENST00000462970	TRAV7	A0A075B6U4	112 aa		4.44	□□□□□ -1.7
PSMD4-208	ENST00000462970	NDUFC1	O43677	76 aa		4.44	□□□□□ -1.7
PSMD4-208	ENST00000462970	SERP1	Q9Y6X1	66 aa		4.44	□□□□□ -1.7
PSMD4-208	ENST00000462970	MACF1	Q9UPN3	7388 aa	Known RBP	4.44	□□□□□ -1.7
PSMD4-208	ENST00000462970		A8MUN3	132 aa		4.43	□□□□□ -1.7
PSMD4-208	ENST00000462970	PRO0628	Q9UI54	55 aa		4.42	□□□□□ -1.7
PSMD4-208	ENST00000462970	ATP5E	P56381	51 aa	Predicted RBP	4.41	□□□□□ -1.7
PSMD4-208	ENST00000462970	SMIM26	A0A096LP01	95 aa		4.4	□□□□□ -1.71
PSMD4-208	ENST00000462970	KRTAP9-9	Q9BYP9	154 aa		4.4	□□□□□ -1.71
PSMD4-208	ENST00000462970	KRTAP9-4	Q9BYQ2	154 aa		4.4	□□□□□ -1.71
PSMD4-208	ENST00000462970		A0A0A0MQY5	61 aa		4.38	□□□□□ -1.71
PSMD4-208	ENST00000462970	C20orf197	Q8N268	126 aa		4.38	□□□□□ -1.71
PSMD4-208	ENST00000462970	KRTAP15-1	Q3LI76	137 aa		4.37	□□□□□ -1.71
PSMD4-208	ENST00000462970	CYSTM1	Q9H1C7	97 aa		4.36	□□□□□ -1.71
PSMD4-208	ENST00000462970	DMAC1	Q96GE9	116 aa		4.35	□□□□□ -1.71
PSMD4-208	ENST00000462970	SNURF	Q9Y675	71 aa		4.35	□□□□□ -1.71
PSMD4-208	ENST00000462970	ADM2	Q7Z4H4	148 aa		4.33	□□□□□ -1.72
PSMD4-208	ENST00000462970		H7BZZ5	65 aa		4.32	□□□□□ -1.72
PSMD4-208	ENST00000462970		V9GYY9	64 aa		4.32	□□□□□ -1.72
PSMD4-208	ENST00000462970		Q5VV11	94 aa		4.31	□□□□□ -1.72
PSMD4-208	ENST00000462970	ACYP2	P14621	99 aa		4.3	□□□□□ -1.72
PSMD4-208	ENST00000462970	KRTAP19-6	Q3LI70	58 aa		4.3	□□□□□ -1.72
PSMD4-208	ENST00000462970	LCE1D	Q5T752	114 aa		4.3	□□□□□ -1.72
PSMD4-208	ENST00000462970	SPRR2G	Q9BYE4	73 aa		4.3	□□□□□ -1.72
PSMD4-208	ENST00000462970		H0YAA0	97 aa		4.29	□□□□□ -1.72
PSMD4-208	ENST00000462970	BRK1	Q8WUW1	75 aa		4.29	□□□□□ -1.72
PSMD4-208	ENST00000462970	CRIPT	Q9P021	101 aa		4.29	□□□□□ -1.72
PSMD4-208	ENST00000462970	KRTAP4-8	A0A0G2JLE6	195 aa		4.28	□□□□□ -1.72
PSMD4-208	ENST00000462970	CHKB-CPT1B	H3BT56	60 aa		4.28	□□□□□ -1.72
PSMD4-208	ENST00000462970	SEC61G	P60059	68 aa		4.27	□□□□□ -1.73
PSMD4-208	ENST00000462970	MT1B	P07438	61 aa		4.26	□□□□□ -1.73
PSMD4-208	ENST00000462970	KRTAP19-8	Q3LI54	63 aa		4.26	□□□□□ -1.73
PSMD4-208	ENST00000462970	LCE5A	Q5TCM9	118 aa		4.25	□□□□□ -1.73
PSMD4-208	ENST00000462970	SPTSSB	Q8NFR3	76 aa		4.25	□□□□□ -1.73
PSMD4-208	ENST00000462970		P0C880	135 aa		4.23	□□□□□ -1.73
PSMD4-208	ENST00000462970		A6NN06	94 aa		4.21	□□□□□ -1.74
PSMD4-208	ENST00000462970		R4GN34	69 aa		4.21	□□□□□ -1.74
PSMD4-208	ENST00000462970		M0QZ58	72 aa		4.2	□□□□□ -1.74
PSMD4-208	ENST00000462970	SPANXA2-OT1	Q8N9U9	137 aa		4.2	□□□□□ -1.74
PSMD4-208	ENST00000462970	PMAIP1	Q13794	54 aa		4.18	□□□□□ -1.74
PSMD4-208	ENST00000462970	NEB	P20929	6669 aa		4.18	□□□□□ -1.74
PSMD4-208	ENST00000462970	KRTAP6-3	Q3LI67	103 aa		4.17	□□□□□ -1.74
PSMD4-208	ENST00000462970	LINC01554	Q52M75	96 aa		4.17	□□□□□ -1.74
PSMD4-208	ENST00000462970		Q1T7F1	81 aa		4.16	□□□□□ -1.74
PSMD4-208	ENST00000462970	KRTAP10-5	P60370	271 aa		4.14	□□□□□ -1.75
PSMD4-208	ENST00000462970	COA5	Q86WW8	74 aa		4.14	□□□□□ -1.75
PSMD4-208	ENST00000462970	PLAC4	Q8WY50	150 aa		4.14	□□□□□ -1.75
PSMD4-208	ENST00000462970	KRTAP4-9	Q9BYQ8	210 aa		4.11	□□□□□ -1.75
PSMD4-208	ENST00000462970	KRTAP4-7	Q9BYR0	210 aa		4.11	□□□□□ -1.75
PSMD4-208	ENST00000462970	PSPHP1	O15172	72 aa		4.07	□□□□□ -1.76
PSMD4-208	ENST00000462970	PRO2289	Q9P1D8	64 aa		4.06	□□□□□ -1.76
PSMD4-208	ENST00000462970	MUC12	Q9UKN1	5478 aa		4.04	□□□□□ -1.76
PSMD4-208	ENST00000462970	MT1X	P80297	61 aa		4.03	□□□□□ -1.76
PSMD4-208	ENST00000462970	KTN1-AS1	Q86SY8	53 aa		4.03	□□□□□ -1.76
PSMD4-208	ENST00000462970	KRTAP4-11	Q9BYQ6	195 aa		4.02	□□□□□ -1.77
PSMD4-208	ENST00000462970	PRR15L	Q9BU68	103 aa		4.01	□□□□□ -1.77
PSMD4-208	ENST00000462970		A6NED7	52 aa		3.99	□□□□□ -1.77
PSMD4-208	ENST00000462970	KRTAP13-4	Q3LI77	160 aa		3.99	□□□□□ -1.77
PSMD4-208	ENST00000462970		A0A0D9SG42	100 aa		3.96	□□□□□ -1.78
PSMD4-208	ENST00000462970	CDC42SE1	Q9NRR8	79 aa		3.96	□□□□□ -1.78
PSMD4-208	ENST00000462970		A0A1B0GU33	70 aa		3.94	□□□□□ -1.78
PSMD4-208	ENST00000462970		A0A1B0GU69	56 aa		3.93	□□□□□ -1.78
PSMD4-208	ENST00000462970	KRTAP20-1	Q3LI63	56 aa		3.93	□□□□□ -1.78
PSMD4-208	ENST00000462970	SPATA8	Q6RVD6	105 aa		3.93	□□□□□ -1.78
PSMD4-208	ENST00000462970	CAMK2N1	Q7Z7J9	78 aa		3.93	□□□□□ -1.78
PSMD4-208	ENST00000462970	LINC01558	Q9Y6Z2	57 aa		3.92	□□□□□ -1.78
PSMD4-208	ENST00000462970	MDN1	Q9NU22	5596 aa		3.92	□□□□□ -1.78
PSMD4-208	ENST00000462970	KRTAP5-9	P26371	169 aa		3.91	□□□□□ -1.78
PSMD4-208	ENST00000462970	KMT2D	O14686	5537 aa		3.9	□□□□□ -1.78
PSMD4-208	ENST00000462970	KRTAP4-2	Q9BYR5	136 aa		3.9	□□□□□ -1.79
PSMD4-208	ENST00000462970	KRTAP12-2	P59991	146 aa		3.88	□□□□□ -1.79
PSMD4-208	ENST00000462970	SPINT4	Q6UDR6	99 aa		3.88	□□□□□ -1.79
PSMD4-208	ENST00000462970	KRTAP8-1	Q8IUC2	63 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms