RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 PCP4P48539 62 aa9.98□□□□□ -0.81
NPM3-202ENST00000462391 H3BPC8 53 aa9.95□□□□□ -0.82
NPM3-202ENST00000462391 LINC00208Q96KT6 92 aa9.94□□□□□ -0.82
NPM3-202ENST00000462391 CCDC179H3BU77 68 aa9.93□□□□□ -0.82
NPM3-202ENST00000462391 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
NPM3-202ENST00000462391 KRTAP9-7A8MTY7 169 aa9.91□□□□□ -0.82
NPM3-202ENST00000462391 C1orf64Q8NEQ6 169 aa9.91□□□□□ -0.82
NPM3-202ENST00000462391 KRTAP19-6Q3LI70 58 aa9.9□□□□□ -0.82
NPM3-202ENST00000462391 KRTAP3-1Q9BYR8 98 aa9.9□□□□□ -0.82
NPM3-202ENST00000462391 SNURFQ9Y675 71 aa9.89□□□□□ -0.83
NPM3-202ENST00000462391 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
NPM3-202ENST00000462391 S4R3F8 94 aa9.87□□□□□ -0.83
NPM3-202ENST00000462391 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
NPM3-202ENST00000462391 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
NPM3-202ENST00000462391 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
NPM3-202ENST00000462391 LCA10Q71F78 164 aa9.78□□□□□ -0.84
NPM3-202ENST00000462391 NDUFC1O43677 76 aa9.76□□□□□ -0.85
NPM3-202ENST00000462391 CYSTM1Q9H1C7 97 aa9.76□□□□□ -0.85
NPM3-202ENST00000462391 H7BZZ5 65 aa9.7□□□□□ -0.86
NPM3-202ENST00000462391 MACF1Q9UPN3 7388 aaKnown RBP9.69□□□□□ -0.86
NPM3-202ENST00000462391 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
NPM3-202ENST00000462391 SPRR2GQ9BYE4 73 aa9.61□□□□□ -0.87
NPM3-202ENST00000462391 SPANXA2-OT1Q8N9U9 137 aa9.6□□□□□ -0.87
NPM3-202ENST00000462391 TMEM258P61165 79 aa9.56□□□□□ -0.88
NPM3-202ENST00000462391 Q5VV11 94 aa9.55□□□□□ -0.88
NPM3-202ENST00000462391 SYNE2Q8WXH0 6885 aaKnown RBP9.55□□□□□ -0.88
NPM3-202ENST00000462391 KRTAP19-8Q3LI54 63 aa9.54□□□□□ -0.88
NPM3-202ENST00000462391 MT1BP07438 61 aa9.52□□□□□ -0.89
NPM3-202ENST00000462391 A8MUN3 132 aa9.5□□□□□ -0.89
NPM3-202ENST00000462391 ATP5EP56381 51 aaPredicted RBP9.5□□□□□ -0.89
NPM3-202ENST00000462391 CRIPTQ9P021 101 aa9.5□□□□□ -0.89
NPM3-202ENST00000462391 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
NPM3-202ENST00000462391 A6NN06 94 aa9.44□□□□□ -0.9
NPM3-202ENST00000462391 H0YAA0 97 aa9.42□□□□□ -0.9
NPM3-202ENST00000462391 ACYP2P14621 99 aa9.42□□□□□ -0.9
NPM3-202ENST00000462391 KRTAP6-3Q3LI67 103 aa9.41□□□□□ -0.9
NPM3-202ENST00000462391 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
NPM3-202ENST00000462391 COA5Q86WW8 74 aa9.3□□□□□ -0.92
NPM3-202ENST00000462391 SERP1Q9Y6X1 66 aa9.29□□□□□ -0.92
NPM3-202ENST00000462391 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
NPM3-202ENST00000462391 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
NPM3-202ENST00000462391 RPS28P62857 69 aaKnown RBP9.21□□□□□ -0.94
NPM3-202ENST00000462391 SPTSSBQ8NFR3 76 aa9.13□□□□□ -0.95
NPM3-202ENST00000462391 R4GN34 69 aa9.06□□□□□ -0.96
NPM3-202ENST00000462391 P0C880 135 aa9.04□□□□□ -0.96
NPM3-202ENST00000462391 NEBP20929 6669 aa9.04□□□□□ -0.96
NPM3-202ENST00000462391 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
NPM3-202ENST00000462391 PRO2289Q9P1D8 64 aa9.03□□□□□ -0.96
NPM3-202ENST00000462391 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
NPM3-202ENST00000462391 KRTAP5-9P26371 169 aa8.98□□□□□ -0.97
NPM3-202ENST00000462391 MUC12Q9UKN1 5478 aa8.98□□□□□ -0.97
NPM3-202ENST00000462391 M0QZ58 72 aa8.97□□□□□ -0.97
NPM3-202ENST00000462391 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
NPM3-202ENST00000462391 MT1XP80297 61 aa8.93□□□□□ -0.98
NPM3-202ENST00000462391 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
NPM3-202ENST00000462391 V9GYY9 64 aa8.9□□□□□ -0.98
NPM3-202ENST00000462391 Q1T7F1 81 aa8.89□□□□□ -0.99
NPM3-202ENST00000462391 KMT2DO14686 5537 aa8.85□□□□□ -0.99
NPM3-202ENST00000462391 SEC61GP60059 68 aa8.83□□□□□ -1
NPM3-202ENST00000462391 LINC01554Q52M75 96 aa8.82□□□□□ -1
NPM3-202ENST00000462391 A0A1B0GU69 56 aa8.81□□□□□ -1
NPM3-202ENST00000462391 MDN1Q9NU22 5596 aa8.78□□□□□ -1
NPM3-202ENST00000462391 KRTAP12-2P59991 146 aa8.77□□□□□ -1.01
NPM3-202ENST00000462391 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
NPM3-202ENST00000462391 PSPHP1O15172 72 aa8.72□□□□□ -1.01
NPM3-202ENST00000462391 KRTAP20-1Q3LI63 56 aa8.7□□□□□ -1.02
NPM3-202ENST00000462391 SPRR2FQ96RM1 72 aa8.69□□□□□ -1.02
NPM3-202ENST00000462391 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
NPM3-202ENST00000462391 A0A1B0GU33 70 aa8.61□□□□□ -1.03
NPM3-202ENST00000462391 SPRR2EP22531 72 aa8.56□□□□□ -1.04
NPM3-202ENST00000462391 SPRR2BP35325 72 aa8.56□□□□□ -1.04
NPM3-202ENST00000462391 SPRR2AP35326 72 aa8.56□□□□□ -1.04
NPM3-202ENST00000462391 UQCR11O14957 56 aa8.52□□□□□ -1.05
NPM3-202ENST00000462391 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
NPM3-202ENST00000462391 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
NPM3-202ENST00000462391 KRTAP10-7P60409 375 aaPredicted RBP8.5□□□□□ -1.05
NPM3-202ENST00000462391 KRTAP10-12P60413 245 aa8.5□□□□□ -1.05
NPM3-202ENST00000462391 KRTAP2-3P0C7H8 128 aa8.49□□□□□ -1.05
NPM3-202ENST00000462391 KRTAP2-4Q9BYR9 128 aa8.49□□□□□ -1.05
NPM3-202ENST00000462391 A6NED7 52 aa8.46□□□□□ -1.06
NPM3-202ENST00000462391 LCE1AQ5T7P2 110 aa8.46□□□□□ -1.06
NPM3-202ENST00000462391 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
NPM3-202ENST00000462391 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
NPM3-202ENST00000462391 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
NPM3-202ENST00000462391 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
NPM3-202ENST00000462391 A8MU10 97 aa8.3□□□□□ -1.08
NPM3-202ENST00000462391 CDC42SE1Q9NRR8 79 aa8.3□□□□□ -1.08
NPM3-202ENST00000462391 A0A0D9SG42 100 aa8.28□□□□□ -1.08
NPM3-202ENST00000462391 SPRR2DP22532 72 aa8.28□□□□□ -1.08
NPM3-202ENST00000462391 BRK1Q8WUW1 75 aa8.22□□□□□ -1.09
NPM3-202ENST00000462391 KRTAP2-2Q9BYT5 123 aa8.22□□□□□ -1.09
NPM3-202ENST00000462391 KRTAP2-1Q9BYU5 128 aa8.22□□□□□ -1.09
NPM3-202ENST00000462391 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
NPM3-202ENST00000462391 SPINT4Q6UDR6 99 aa8.13□□□□□ -1.11
NPM3-202ENST00000462391 K7ERS5 55 aa8.07□□□□□ -1.12
NPM3-202ENST00000462391 LCE3BQ5TA77 95 aa8.06□□□□□ -1.12
NPM3-202ENST00000462391 KRTAP19-7Q3SYF9 63 aa7.98□□□□□ -1.13
NPM3-202ENST00000462391 PRO0628Q9UI54 55 aa7.96□□□□□ -1.14
NPM3-202ENST00000462391 MT1EP04732 61 aa7.92□□□□□ -1.14
NPM3-202ENST00000462391 LCE5AQ5TCM9 118 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms