RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 LCA10Q71F78 164 aa4.41□□□□□ -1.7
PTPN18-206ENST00000460992 LPAP08519 4548 aa4.4□□□□□ -1.7
PTPN18-206ENST00000460992 TYMSOSQ8TAI1 123 aa4.4□□□□□ -1.71
PTPN18-206ENST00000460992 SPTSSBQ8NFR3 76 aa4.39□□□□□ -1.71
PTPN18-206ENST00000460992 A6NN06 94 aa4.38□□□□□ -1.71
PTPN18-206ENST00000460992 A0A1B0GU69 56 aa4.37□□□□□ -1.71
PTPN18-206ENST00000460992 C7orf65Q6ZTY9 151 aa4.37□□□□□ -1.71
PTPN18-206ENST00000460992 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
PTPN18-206ENST00000460992 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
PTPN18-206ENST00000460992 SEC61BP60468 96 aaKnown RBP4.36□□□□□ -1.71
PTPN18-206ENST00000460992 UQCR11O14957 56 aa4.35□□□□□ -1.71
PTPN18-206ENST00000460992 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
PTPN18-206ENST00000460992 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
PTPN18-206ENST00000460992 SPINK7P58062 85 aa4.33□□□□□ -1.72
PTPN18-206ENST00000460992 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
PTPN18-206ENST00000460992 RETNLBQ9BQ08 111 aa4.33□□□□□ -1.72
PTPN18-206ENST00000460992 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
PTPN18-206ENST00000460992 A8MU10 97 aa4.29□□□□□ -1.72
PTPN18-206ENST00000460992 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
PTPN18-206ENST00000460992 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
PTPN18-206ENST00000460992 XP32Q5T750 250 aa4.27□□□□□ -1.73
PTPN18-206ENST00000460992 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
PTPN18-206ENST00000460992 RBM12B-AS1Q9P1G2 102 aa4.26□□□□□ -1.73
PTPN18-206ENST00000460992 C20orf166-AS1Q96NR2 134 aa4.24□□□□□ -1.73
PTPN18-206ENST00000460992 A8MUU9 505 aa4.23□□□□□ -1.73
PTPN18-206ENST00000460992 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
PTPN18-206ENST00000460992 MUC2Q02817 5179 aa4.17□□□□□ -1.74
PTPN18-206ENST00000460992 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
PTPN18-206ENST00000460992 K7ERS5 55 aa4.13□□□□□ -1.75
PTPN18-206ENST00000460992 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
PTPN18-206ENST00000460992 A0A1B0GU33 70 aa4.11□□□□□ -1.75
PTPN18-206ENST00000460992 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
PTPN18-206ENST00000460992 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
PTPN18-206ENST00000460992 H1FX-AS1Q4G0G2 97 aa4.09□□□□□ -1.75
PTPN18-206ENST00000460992 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
PTPN18-206ENST00000460992 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
PTPN18-206ENST00000460992 H0YAA0 97 aa4.04□□□□□ -1.76
PTPN18-206ENST00000460992 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
PTPN18-206ENST00000460992 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
PTPN18-206ENST00000460992 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
PTPN18-206ENST00000460992 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
PTPN18-206ENST00000460992 CSAG1Q6PB30 78 aa4□□□□□ -1.77
PTPN18-206ENST00000460992 ADM2Q7Z4H4 148 aa3.99□□□□□ -1.77
PTPN18-206ENST00000460992 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
PTPN18-206ENST00000460992 S4R3F8 94 aa3.95□□□□□ -1.78
PTPN18-206ENST00000460992 ROMO1P60602 79 aa3.93□□□□□ -1.78
PTPN18-206ENST00000460992 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
PTPN18-206ENST00000460992 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
PTPN18-206ENST00000460992 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
PTPN18-206ENST00000460992 M0QZ58 72 aa3.87□□□□□ -1.79
PTPN18-206ENST00000460992 MT1HP80294 61 aa3.87□□□□□ -1.79
PTPN18-206ENST00000460992 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
PTPN18-206ENST00000460992 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
PTPN18-206ENST00000460992 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
PTPN18-206ENST00000460992 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
PTPN18-206ENST00000460992 M0R2T5 61 aa3.78□□□□□ -1.8
PTPN18-206ENST00000460992 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
PTPN18-206ENST00000460992 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
PTPN18-206ENST00000460992 A0A0D9SG42 100 aa3.76□□□□□ -1.81
PTPN18-206ENST00000460992 P0C880 135 aa3.76□□□□□ -1.81
PTPN18-206ENST00000460992 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
PTPN18-206ENST00000460992 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
PTPN18-206ENST00000460992 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
PTPN18-206ENST00000460992 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
PTPN18-206ENST00000460992 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
PTPN18-206ENST00000460992 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
PTPN18-206ENST00000460992 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
PTPN18-206ENST00000460992 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
PTPN18-206ENST00000460992 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
PTPN18-206ENST00000460992 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
PTPN18-206ENST00000460992 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
PTPN18-206ENST00000460992 R4GN34 69 aa3.67□□□□□ -1.82
PTPN18-206ENST00000460992 MT2AP02795 61 aa3.64□□□□□ -1.83
PTPN18-206ENST00000460992 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
PTPN18-206ENST00000460992 MT1FP04733 61 aa3.62□□□□□ -1.83
PTPN18-206ENST00000460992 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
PTPN18-206ENST00000460992 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
PTPN18-206ENST00000460992 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
PTPN18-206ENST00000460992 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
PTPN18-206ENST00000460992 USH2AO75445 5202 aa3.57□□□□□ -1.84
PTPN18-206ENST00000460992 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
PTPN18-206ENST00000460992 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
PTPN18-206ENST00000460992 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
PTPN18-206ENST00000460992 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
PTPN18-206ENST00000460992 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
PTPN18-206ENST00000460992 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
PTPN18-206ENST00000460992 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
PTPN18-206ENST00000460992 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
PTPN18-206ENST00000460992 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
PTPN18-206ENST00000460992 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
PTPN18-206ENST00000460992 TNP1P09430 55 aa3.42□□□□□ -1.86
PTPN18-206ENST00000460992 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
PTPN18-206ENST00000460992 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
PTPN18-206ENST00000460992 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
PTPN18-206ENST00000460992 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
PTPN18-206ENST00000460992 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
PTPN18-206ENST00000460992 MT1BP07438 61 aa3.34□□□□□ -1.87
PTPN18-206ENST00000460992 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
PTPN18-206ENST00000460992 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.87
PTPN18-206ENST00000460992 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms