RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 FAM236DA0A1B0GTK5 79 aa6.4□□□□□ -1.38
C4A-244ENST00000460060 FAM236CP0DP71 79 aa6.4□□□□□ -1.38
C4A-244ENST00000460060 H7BZZ5 65 aa6.39□□□□□ -1.39
C4A-244ENST00000460060 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
C4A-244ENST00000460060 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
C4A-244ENST00000460060 A8MUN3 132 aa6.35□□□□□ -1.39
C4A-244ENST00000460060 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.39
C4A-244ENST00000460060 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
C4A-244ENST00000460060 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
C4A-244ENST00000460060 ACYP2P14621 99 aa6.29□□□□□ -1.4
C4A-244ENST00000460060 TMEM258P61165 79 aa6.28□□□□□ -1.4
C4A-244ENST00000460060 USH2AO75445 5202 aa6.28□□□□□ -1.4
C4A-244ENST00000460060 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
C4A-244ENST00000460060 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
C4A-244ENST00000460060 S4R3F8 94 aa6.23□□□□□ -1.41
C4A-244ENST00000460060 LCA10Q71F78 164 aa6.2□□□□□ -1.42
C4A-244ENST00000460060 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
C4A-244ENST00000460060 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
C4A-244ENST00000460060 COA5Q86WW8 74 aa6.18□□□□□ -1.42
C4A-244ENST00000460060 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
C4A-244ENST00000460060 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
C4A-244ENST00000460060 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
C4A-244ENST00000460060 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
C4A-244ENST00000460060 LCE2BO14633 110 aa6.11□□□□□ -1.43
C4A-244ENST00000460060 MT2AP02795 61 aa6.11□□□□□ -1.43
C4A-244ENST00000460060 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.43
C4A-244ENST00000460060 MT1FP04733 61 aa6.07□□□□□ -1.44
C4A-244ENST00000460060 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
C4A-244ENST00000460060 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
C4A-244ENST00000460060 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
C4A-244ENST00000460060 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
C4A-244ENST00000460060 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
C4A-244ENST00000460060 H0YAA0 97 aa5.96□□□□□ -1.46
C4A-244ENST00000460060 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
C4A-244ENST00000460060 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
C4A-244ENST00000460060 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
C4A-244ENST00000460060 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
C4A-244ENST00000460060 SEC61GP60059 68 aa5.89□□□□□ -1.47
C4A-244ENST00000460060 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
C4A-244ENST00000460060 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
C4A-244ENST00000460060 A0A1B0GU69 56 aa5.86□□□□□ -1.47
C4A-244ENST00000460060 P0C880 135 aa5.86□□□□□ -1.47
C4A-244ENST00000460060 V9GYY9 64 aa5.85□□□□□ -1.47
C4A-244ENST00000460060 Q1T7F1 81 aa5.84□□□□□ -1.47
C4A-244ENST00000460060 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
C4A-244ENST00000460060 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
C4A-244ENST00000460060 A0A1B0GU33 70 aa5.74□□□□□ -1.49
C4A-244ENST00000460060 R4GN34 69 aa5.74□□□□□ -1.49
C4A-244ENST00000460060 PSPHP1O15172 72 aa5.73□□□□□ -1.49
C4A-244ENST00000460060 M0QZ58 72 aa5.72□□□□□ -1.49
C4A-244ENST00000460060 NEBP20929 6669 aa5.72□□□□□ -1.49
C4A-244ENST00000460060 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
C4A-244ENST00000460060 Q5VV11 94 aa5.68□□□□□ -1.5
C4A-244ENST00000460060 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
C4A-244ENST00000460060 UQCR11O14957 56 aa5.64□□□□□ -1.51
C4A-244ENST00000460060 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
C4A-244ENST00000460060 LINC01554Q52M75 96 aa5.61□□□□□ -1.51
C4A-244ENST00000460060 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
C4A-244ENST00000460060 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
C4A-244ENST00000460060 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
C4A-244ENST00000460060 A6NED7 52 aa5.58□□□□□ -1.52
C4A-244ENST00000460060 A0A0D9SG42 100 aa5.56□□□□□ -1.52
C4A-244ENST00000460060 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
C4A-244ENST00000460060 A6NN06 94 aa5.54□□□□□ -1.52
C4A-244ENST00000460060 A8MU10 97 aa5.53□□□□□ -1.52
C4A-244ENST00000460060 MT1BP07438 61 aa5.51□□□□□ -1.53
C4A-244ENST00000460060 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
C4A-244ENST00000460060 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
C4A-244ENST00000460060 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
C4A-244ENST00000460060 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
C4A-244ENST00000460060 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
C4A-244ENST00000460060 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
C4A-244ENST00000460060 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
C4A-244ENST00000460060 KMT2DO14686 5537 aa5.41□□□□□ -1.54
C4A-244ENST00000460060 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
C4A-244ENST00000460060 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
C4A-244ENST00000460060 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
C4A-244ENST00000460060 K7ERS5 55 aa5.37□□□□□ -1.55
C4A-244ENST00000460060 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
C4A-244ENST00000460060 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
C4A-244ENST00000460060 MT1XP80297 61 aa5.29□□□□□ -1.56
C4A-244ENST00000460060 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
C4A-244ENST00000460060 SPRR2EP22531 72 aa5.22□□□□□ -1.57
C4A-244ENST00000460060 SPRR2BP35325 72 aa5.22□□□□□ -1.57
C4A-244ENST00000460060 SPRR2AP35326 72 aa5.22□□□□□ -1.57
C4A-244ENST00000460060 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
C4A-244ENST00000460060 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
C4A-244ENST00000460060 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
C4A-244ENST00000460060 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
C4A-244ENST00000460060 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
C4A-244ENST00000460060 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
C4A-244ENST00000460060 ROMO1P60602 79 aa5.1□□□□□ -1.59
C4A-244ENST00000460060 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
C4A-244ENST00000460060 TNP1P09430 55 aa5.07□□□□□ -1.6
C4A-244ENST00000460060 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
C4A-244ENST00000460060 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
C4A-244ENST00000460060 SPRR2DP22532 72 aa5.04□□□□□ -1.6
C4A-244ENST00000460060 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
C4A-244ENST00000460060 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
C4A-244ENST00000460060 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms