RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 LCA10Q71F78 164 aa6.05□□□□□ -1.44
GTF3C2-208ENST00000457748 H7BZZ5 65 aa6.04□□□□□ -1.44
GTF3C2-208ENST00000457748 LCE2DQ5TA82 110 aaPredicted RBP6.03□□□□□ -1.44
GTF3C2-208ENST00000457748 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
GTF3C2-208ENST00000457748 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
GTF3C2-208ENST00000457748 CHKB-CPT1BH3BT56 60 aa6□□□□□ -1.45
GTF3C2-208ENST00000457748 KRTAP10-6P60371 365 aaPredicted RBP6□□□□□ -1.45
GTF3C2-208ENST00000457748 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
GTF3C2-208ENST00000457748 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
GTF3C2-208ENST00000457748 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
GTF3C2-208ENST00000457748 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
GTF3C2-208ENST00000457748 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
GTF3C2-208ENST00000457748 PCP4P48539 62 aa5.93□□□□□ -1.46
GTF3C2-208ENST00000457748 TMEM258P61165 79 aa5.92□□□□□ -1.46
GTF3C2-208ENST00000457748 COA5Q86WW8 74 aa5.92□□□□□ -1.46
GTF3C2-208ENST00000457748 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
GTF3C2-208ENST00000457748 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
GTF3C2-208ENST00000457748 MT2AP02795 61 aa5.85□□□□□ -1.47
GTF3C2-208ENST00000457748 H0YAA0 97 aa5.81□□□□□ -1.48
GTF3C2-208ENST00000457748 MT1FP04733 61 aa5.81□□□□□ -1.48
GTF3C2-208ENST00000457748 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
GTF3C2-208ENST00000457748 SEC61GP60059 68 aa5.74□□□□□ -1.49
GTF3C2-208ENST00000457748 SERP1Q9Y6X1 66 aa5.74□□□□□ -1.49
GTF3C2-208ENST00000457748 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
GTF3C2-208ENST00000457748 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
GTF3C2-208ENST00000457748 P0C880 135 aa5.68□□□□□ -1.5
GTF3C2-208ENST00000457748 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
GTF3C2-208ENST00000457748 KRTAP3-2Q9BYR7 98 aa5.67□□□□□ -1.5
GTF3C2-208ENST00000457748 R4GN34 69 aa5.65□□□□□ -1.5
GTF3C2-208ENST00000457748 A0A1B0GU69 56 aa5.64□□□□□ -1.51
GTF3C2-208ENST00000457748 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
GTF3C2-208ENST00000457748 M0QZ58 72 aa5.61□□□□□ -1.51
GTF3C2-208ENST00000457748 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
GTF3C2-208ENST00000457748 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
GTF3C2-208ENST00000457748 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
GTF3C2-208ENST00000457748 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
GTF3C2-208ENST00000457748 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
GTF3C2-208ENST00000457748 V9GYY9 64 aa5.56□□□□□ -1.52
GTF3C2-208ENST00000457748 SMIM26A0A096LP01 95 aa5.55□□□□□ -1.52
GTF3C2-208ENST00000457748 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
GTF3C2-208ENST00000457748 LCE2BO14633 110 aa5.55□□□□□ -1.52
GTF3C2-208ENST00000457748 A0A1B0GU33 70 aa5.54□□□□□ -1.52
GTF3C2-208ENST00000457748 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
GTF3C2-208ENST00000457748 Q5VV11 94 aa5.52□□□□□ -1.53
GTF3C2-208ENST00000457748 Q1T7F1 81 aa5.49□□□□□ -1.53
GTF3C2-208ENST00000457748 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
GTF3C2-208ENST00000457748 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
GTF3C2-208ENST00000457748 USH2AO75445 5202 aa5.45□□□□□ -1.54
GTF3C2-208ENST00000457748 PSPHP1O15172 72 aa5.44□□□□□ -1.54
GTF3C2-208ENST00000457748 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
GTF3C2-208ENST00000457748 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
GTF3C2-208ENST00000457748 A0A0D9SG42 100 aa5.41□□□□□ -1.54
GTF3C2-208ENST00000457748 UQCR11O14957 56 aa5.41□□□□□ -1.54
GTF3C2-208ENST00000457748 MT1BP07438 61 aa5.41□□□□□ -1.54
GTF3C2-208ENST00000457748 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
GTF3C2-208ENST00000457748 A6NN06 94 aa5.37□□□□□ -1.55
GTF3C2-208ENST00000457748 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
GTF3C2-208ENST00000457748 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
GTF3C2-208ENST00000457748 A8MU10 97 aa5.31□□□□□ -1.56
GTF3C2-208ENST00000457748 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
GTF3C2-208ENST00000457748 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
GTF3C2-208ENST00000457748 A6NED7 52 aa5.3□□□□□ -1.56
GTF3C2-208ENST00000457748 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
GTF3C2-208ENST00000457748 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
GTF3C2-208ENST00000457748 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
GTF3C2-208ENST00000457748 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
GTF3C2-208ENST00000457748 K7ERS5 55 aa5.21□□□□□ -1.58
GTF3C2-208ENST00000457748 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
GTF3C2-208ENST00000457748 MT1XP80297 61 aa5.18□□□□□ -1.58
GTF3C2-208ENST00000457748 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
GTF3C2-208ENST00000457748 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
GTF3C2-208ENST00000457748 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.6
GTF3C2-208ENST00000457748 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
GTF3C2-208ENST00000457748 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
GTF3C2-208ENST00000457748 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
GTF3C2-208ENST00000457748 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
GTF3C2-208ENST00000457748 TNP1P09430 55 aa4.95□□□□□ -1.62
GTF3C2-208ENST00000457748 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
GTF3C2-208ENST00000457748 ROMO1P60602 79 aa4.87□□□□□ -1.63
GTF3C2-208ENST00000457748 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
GTF3C2-208ENST00000457748 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
GTF3C2-208ENST00000457748 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
GTF3C2-208ENST00000457748 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
GTF3C2-208ENST00000457748 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
GTF3C2-208ENST00000457748 KMT2DO14686 5537 aa4.83□□□□□ -1.64
GTF3C2-208ENST00000457748 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
GTF3C2-208ENST00000457748 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
GTF3C2-208ENST00000457748 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
GTF3C2-208ENST00000457748 NEBP20929 6669 aa4.74□□□□□ -1.65
GTF3C2-208ENST00000457748 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
GTF3C2-208ENST00000457748 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
GTF3C2-208ENST00000457748 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
GTF3C2-208ENST00000457748 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
GTF3C2-208ENST00000457748 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
GTF3C2-208ENST00000457748 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
GTF3C2-208ENST00000457748 SPRR2EP22531 72 aa4.64□□□□□ -1.67
GTF3C2-208ENST00000457748 SPRR2BP35325 72 aa4.64□□□□□ -1.67
GTF3C2-208ENST00000457748 SPRR2AP35326 72 aa4.64□□□□□ -1.67
GTF3C2-208ENST00000457748 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
GTF3C2-208ENST00000457748 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms