RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 H3BS24 57 aa4.69□□□□□ -1.66
RPE-216ENST00000454822 ATP11AUNQ6ZP68 121 aa4.69□□□□□ -1.66
RPE-216ENST00000454822 RPL37P61927 97 aaKnown RBP4.68□□□□□ -1.66
RPE-216ENST00000454822 XP32Q5T750 250 aa4.68□□□□□ -1.66
RPE-216ENST00000454822 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
RPE-216ENST00000454822 LCA10Q71F78 164 aa4.62□□□□□ -1.67
RPE-216ENST00000454822 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
RPE-216ENST00000454822 TPRXLQ17RH7 258 aa4.6□□□□□ -1.67
RPE-216ENST00000454822 A6NED7 52 aa4.59□□□□□ -1.67
RPE-216ENST00000454822 A0A1B0GU69 56 aa4.58□□□□□ -1.68
RPE-216ENST00000454822 HERC1Q15751 4861 aa4.57□□□□□ -1.68
RPE-216ENST00000454822 SPTSSBQ8NFR3 76 aa4.57□□□□□ -1.68
RPE-216ENST00000454822 LRP2P98164 4655 aa4.55□□□□□ -1.68
RPE-216ENST00000454822 J3QL48 77 aa4.54□□□□□ -1.68
RPE-216ENST00000454822 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
RPE-216ENST00000454822 LPAP08519 4548 aa4.53□□□□□ -1.68
RPE-216ENST00000454822 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
RPE-216ENST00000454822 UQCR11O14957 56 aa4.47□□□□□ -1.69
RPE-216ENST00000454822 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
RPE-216ENST00000454822 S4R3F8 94 aa4.45□□□□□ -1.7
RPE-216ENST00000454822 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
RPE-216ENST00000454822 H1FX-AS1Q4G0G2 97 aa4.45□□□□□ -1.7
RPE-216ENST00000454822 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
RPE-216ENST00000454822 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
RPE-216ENST00000454822 A0A1B0GU33 70 aa4.4□□□□□ -1.7
RPE-216ENST00000454822 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
RPE-216ENST00000454822 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
RPE-216ENST00000454822 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
RPE-216ENST00000454822 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
RPE-216ENST00000454822 H0YAA0 97 aa4.36□□□□□ -1.71
RPE-216ENST00000454822 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
RPE-216ENST00000454822 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
RPE-216ENST00000454822 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
RPE-216ENST00000454822 P0C880 135 aa4.3□□□□□ -1.72
RPE-216ENST00000454822 MUC2Q02817 5179 aa4.29□□□□□ -1.72
RPE-216ENST00000454822 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
RPE-216ENST00000454822 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
RPE-216ENST00000454822 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
RPE-216ENST00000454822 LCE2BO14633 110 aa4.22□□□□□ -1.73
RPE-216ENST00000454822 A0A0D9SG42 100 aa4.21□□□□□ -1.74
RPE-216ENST00000454822 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
RPE-216ENST00000454822 ROMO1P60602 79 aa4.19□□□□□ -1.74
RPE-216ENST00000454822 K7ERS5 55 aa4.19□□□□□ -1.74
RPE-216ENST00000454822 M0QZ58 72 aa4.18□□□□□ -1.74
RPE-216ENST00000454822 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
RPE-216ENST00000454822 FLGP20930 4061 aaPredicted RBP4.16□□□□□ -1.74
RPE-216ENST00000454822 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
RPE-216ENST00000454822 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
RPE-216ENST00000454822 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
RPE-216ENST00000454822 R4GN34 69 aa4.11□□□□□ -1.75
RPE-216ENST00000454822 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
RPE-216ENST00000454822 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
RPE-216ENST00000454822 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
RPE-216ENST00000454822 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
RPE-216ENST00000454822 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
RPE-216ENST00000454822 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
RPE-216ENST00000454822 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
RPE-216ENST00000454822 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
RPE-216ENST00000454822 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
RPE-216ENST00000454822 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
RPE-216ENST00000454822 KRTAP4-8A0A0G2JLE6 195 aa4.06□□□□□ -1.76
RPE-216ENST00000454822 MT1HP80294 61 aa4□□□□□ -1.77
RPE-216ENST00000454822 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
RPE-216ENST00000454822 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
RPE-216ENST00000454822 M0R2T5 61 aa3.98□□□□□ -1.77
RPE-216ENST00000454822 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
RPE-216ENST00000454822 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
RPE-216ENST00000454822 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
RPE-216ENST00000454822 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
RPE-216ENST00000454822 MT2AP02795 61 aa3.89□□□□□ -1.79
RPE-216ENST00000454822 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
RPE-216ENST00000454822 MT1FP04733 61 aa3.88□□□□□ -1.79
RPE-216ENST00000454822 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
RPE-216ENST00000454822 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
RPE-216ENST00000454822 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
RPE-216ENST00000454822 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
RPE-216ENST00000454822 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
RPE-216ENST00000454822 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
RPE-216ENST00000454822 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
RPE-216ENST00000454822 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
RPE-216ENST00000454822 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
RPE-216ENST00000454822 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
RPE-216ENST00000454822 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
RPE-216ENST00000454822 LCE1DQ5T752 114 aa3.71□□□□□ -1.81
RPE-216ENST00000454822 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.81
RPE-216ENST00000454822 TNP1P09430 55 aa3.71□□□□□ -1.82
RPE-216ENST00000454822 MT1BP07438 61 aa3.7□□□□□ -1.82
RPE-216ENST00000454822 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
RPE-216ENST00000454822 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
RPE-216ENST00000454822 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
RPE-216ENST00000454822 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
RPE-216ENST00000454822 MT1XP80297 61 aa3.62□□□□□ -1.83
RPE-216ENST00000454822 USH2AO75445 5202 aa3.6□□□□□ -1.83
RPE-216ENST00000454822 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
RPE-216ENST00000454822 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
RPE-216ENST00000454822 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
RPE-216ENST00000454822 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
RPE-216ENST00000454822 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
RPE-216ENST00000454822 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
RPE-216ENST00000454822 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms