RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ATP5EP56381 51 aaPredicted RBP3.06□□□□□ -1.92
SDC4P-201ENST00000453285 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
SDC4P-201ENST00000453285 COX6B2Q6YFQ2 88 aa3.05□□□□□ -1.92
SDC4P-201ENST00000453285 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
SDC4P-201ENST00000453285 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
SDC4P-201ENST00000453285 A8MUN3 132 aa3.02□□□□□ -1.93
SDC4P-201ENST00000453285 ACYP2P14621 99 aa3.02□□□□□ -1.93
SDC4P-201ENST00000453285 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
SDC4P-201ENST00000453285 RPS28P62857 69 aaKnown RBP3.01□□□□□ -1.93
SDC4P-201ENST00000453285 COA5Q86WW8 74 aa3□□□□□ -1.93
SDC4P-201ENST00000453285 RBM12B-AS1Q9P1G2 102 aa3□□□□□ -1.93
SDC4P-201ENST00000453285 H1FX-AS1Q4G0G2 97 aa2.98□□□□□ -1.93
SDC4P-201ENST00000453285 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
SDC4P-201ENST00000453285 LCA10Q71F78 164 aa2.95□□□□□ -1.94
SDC4P-201ENST00000453285 FLGP20930 4061 aaPredicted RBP2.94□□□□□ -1.94
SDC4P-201ENST00000453285 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
SDC4P-201ENST00000453285 S4R3F8 94 aa2.94□□□□□ -1.94
SDC4P-201ENST00000453285 SMIM26A0A096LP01 95 aa2.93□□□□□ -1.94
SDC4P-201ENST00000453285 Q1T7F1 81 aa2.9□□□□□ -1.95
SDC4P-201ENST00000453285 SPTSSBQ8NFR3 76 aa2.89□□□□□ -1.95
SDC4P-201ENST00000453285 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
SDC4P-201ENST00000453285 MT1HP80294 61 aa2.88□□□□□ -1.95
SDC4P-201ENST00000453285 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
SDC4P-201ENST00000453285 V9GYY9 64 aa2.86□□□□□ -1.95
SDC4P-201ENST00000453285 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
SDC4P-201ENST00000453285 A0A1B0GU69 56 aa2.83□□□□□ -1.96
SDC4P-201ENST00000453285 H0YAA0 97 aa2.83□□□□□ -1.96
SDC4P-201ENST00000453285 PSPHP1O15172 72 aa2.83□□□□□ -1.96
SDC4P-201ENST00000453285 Q5VV11 94 aa2.83□□□□□ -1.96
SDC4P-201ENST00000453285 PRR15LQ9BU68 103 aa2.83□□□□□ -1.96
SDC4P-201ENST00000453285 P0C880 135 aa2.81□□□□□ -1.96
SDC4P-201ENST00000453285 ADM2Q7Z4H4 148 aa2.81□□□□□ -1.96
SDC4P-201ENST00000453285 SEC61GP60059 68 aa2.8□□□□□ -1.96
SDC4P-201ENST00000453285 M0R2T5 61 aa2.79□□□□□ -1.96
SDC4P-201ENST00000453285 KRTAP9-8Q9BYQ0 159 aa2.79□□□□□ -1.96
SDC4P-201ENST00000453285 A0A1B0GU33 70 aa2.77□□□□□ -1.97
SDC4P-201ENST00000453285 MT2AP02795 61 aa2.76□□□□□ -1.97
SDC4P-201ENST00000453285 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
SDC4P-201ENST00000453285 UQCR11O14957 56 aa2.74□□□□□ -1.97
SDC4P-201ENST00000453285 MT1FP04733 61 aa2.74□□□□□ -1.97
SDC4P-201ENST00000453285 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
SDC4P-201ENST00000453285 A6NED7 52 aa2.72□□□□□ -1.97
SDC4P-201ENST00000453285 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
SDC4P-201ENST00000453285 A8MU10 97 aa2.71□□□□□ -1.98
SDC4P-201ENST00000453285 M0QZ58 72 aa2.71□□□□□ -1.98
SDC4P-201ENST00000453285 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
SDC4P-201ENST00000453285 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
SDC4P-201ENST00000453285 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
SDC4P-201ENST00000453285 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
SDC4P-201ENST00000453285 CRIPTQ9P021 101 aa2.7□□□□□ -1.98
SDC4P-201ENST00000453285 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
SDC4P-201ENST00000453285 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
SDC4P-201ENST00000453285 R4GN34 69 aa2.69□□□□□ -1.98
SDC4P-201ENST00000453285 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
SDC4P-201ENST00000453285 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
SDC4P-201ENST00000453285 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
SDC4P-201ENST00000453285 BRK1Q8WUW1 75 aa2.67□□□□□ -1.98
SDC4P-201ENST00000453285 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
SDC4P-201ENST00000453285 NEBP20929 6669 aa2.66□□□□□ -1.98
SDC4P-201ENST00000453285 A0A0D9SG42 100 aa2.65□□□□□ -1.99
SDC4P-201ENST00000453285 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
SDC4P-201ENST00000453285 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
SDC4P-201ENST00000453285 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
SDC4P-201ENST00000453285 LINC01554Q52M75 96 aa2.63□□□□□ -1.99
SDC4P-201ENST00000453285 A6NN06 94 aa2.62□□□□□ -1.99
SDC4P-201ENST00000453285 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
SDC4P-201ENST00000453285 KRTAP19-4Q3LI73 84 aa2.62□□□□□ -1.99
SDC4P-201ENST00000453285 MT1BP07438 61 aa2.6□□□□□ -1.99
SDC4P-201ENST00000453285 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
SDC4P-201ENST00000453285 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
SDC4P-201ENST00000453285 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
SDC4P-201ENST00000453285 K7ERS5 55 aa2.55□□□□□ -2
SDC4P-201ENST00000453285 PLAC4Q8WY50 150 aa2.55□□□□□ -2
SDC4P-201ENST00000453285 MACF1Q9UPN3 7388 aaKnown RBP2.54□□□□□ -2
SDC4P-201ENST00000453285 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
SDC4P-201ENST00000453285 PMAIP1Q13794 54 aa2.53□□□□□ -2
SDC4P-201ENST00000453285 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
SDC4P-201ENST00000453285 SVIPQ8NHG7 77 aa2.52□□□□□ -2.01
SDC4P-201ENST00000453285 USH2AO75445 5202 aa2.52□□□□□ -2.01
SDC4P-201ENST00000453285 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
SDC4P-201ENST00000453285 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
SDC4P-201ENST00000453285 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
SDC4P-201ENST00000453285 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
SDC4P-201ENST00000453285 MT1XP80297 61 aa2.5□□□□□ -2.01
SDC4P-201ENST00000453285 LCE3BQ5TA77 95 aa2.5□□□□□ -2.01
SDC4P-201ENST00000453285 ROMO1P60602 79 aa2.48□□□□□ -2.01
SDC4P-201ENST00000453285 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
SDC4P-201ENST00000453285 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
SDC4P-201ENST00000453285 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
SDC4P-201ENST00000453285 KMT2DO14686 5537 aa2.43□□□□□ -2.02
SDC4P-201ENST00000453285 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
SDC4P-201ENST00000453285 KTN1-AS1Q86SY8 53 aa2.41□□□□□ -2.02
SDC4P-201ENST00000453285 TNP1P09430 55 aa2.4□□□□□ -2.03
SDC4P-201ENST00000453285 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.03
SDC4P-201ENST00000453285 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
SDC4P-201ENST00000453285 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
SDC4P-201ENST00000453285 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
SDC4P-201ENST00000453285 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
SDC4P-201ENST00000453285 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
SDC4P-201ENST00000453285 KRTAP9-4Q9BYQ2 154 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms