RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SPINK7P58062 85 aa10.84□□□□□ -0.67
C9orf3-208ENST00000451893 HRES1P13985 223 aa10.83□□□□□ -0.68
C9orf3-208ENST00000451893 KRTAP9-8Q9BYQ0 159 aa10.79□□□□□ -0.68
C9orf3-208ENST00000451893 MPLKIPQ8TAP9 179 aa10.76□□□□□ -0.69
C9orf3-208ENST00000451893 MT2AP02795 61 aa10.68□□□□□ -0.7
C9orf3-208ENST00000451893 KRTAP10-10P60014 251 aa10.67□□□□□ -0.7
C9orf3-208ENST00000451893 A8MUN3 132 aa10.65□□□□□ -0.7
C9orf3-208ENST00000451893 DMAC1Q96GE9 116 aa10.64□□□□□ -0.71
C9orf3-208ENST00000451893 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
C9orf3-208ENST00000451893 ACYP2P14621 99 aa10.62□□□□□ -0.71
C9orf3-208ENST00000451893 RPS28P62857 69 aaKnown RBP10.62□□□□□ -0.71
C9orf3-208ENST00000451893 C4orf26Q17RF5 130 aa10.6□□□□□ -0.71
C9orf3-208ENST00000451893 MT1FP04733 61 aa10.59□□□□□ -0.71
C9orf3-208ENST00000451893 USH2AO75445 5202 aa10.54□□□□□ -0.72
C9orf3-208ENST00000451893 COA5Q86WW8 74 aa10.47□□□□□ -0.73
C9orf3-208ENST00000451893 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-208ENST00000451893 KRTAP9-3Q9BYQ3 159 aa10.46□□□□□ -0.73
C9orf3-208ENST00000451893 KRTAP3-1Q9BYR8 98 aa10.46□□□□□ -0.73
C9orf3-208ENST00000451893 SSPOA2VEC9 5147 aa10.46□□□□□ -0.74
C9orf3-208ENST00000451893 LCE2BO14633 110 aa10.44□□□□□ -0.74
C9orf3-208ENST00000451893 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
C9orf3-208ENST00000451893 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
C9orf3-208ENST00000451893 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
C9orf3-208ENST00000451893 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
C9orf3-208ENST00000451893 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
C9orf3-208ENST00000451893 H1FX-AS1Q4G0G2 97 aa10.38□□□□□ -0.75
C9orf3-208ENST00000451893 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
C9orf3-208ENST00000451893 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
C9orf3-208ENST00000451893 FCGBPQ9Y6R7 5405 aaPredicted RBP10.26□□□□□ -0.77
C9orf3-208ENST00000451893 S4R3F8 94 aa10.23□□□□□ -0.77
C9orf3-208ENST00000451893 V9GYY9 64 aa10.22□□□□□ -0.77
C9orf3-208ENST00000451893 Q1T7F1 81 aa10.16□□□□□ -0.78
C9orf3-208ENST00000451893 LCA10Q71F78 164 aa10.15□□□□□ -0.78
C9orf3-208ENST00000451893 KRTAP19-6Q3LI70 58 aa10.13□□□□□ -0.79
C9orf3-208ENST00000451893 LINC01558Q9Y6Z2 57 aa10.1□□□□□ -0.79
C9orf3-208ENST00000451893 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
C9orf3-208ENST00000451893 SEC61GP60059 68 aa9.99□□□□□ -0.81
C9orf3-208ENST00000451893 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
C9orf3-208ENST00000451893 MACF1Q9UPN3 7388 aaKnown RBP9.98□□□□□ -0.81
C9orf3-208ENST00000451893 A0A1B0GU69 56 aa9.95□□□□□ -0.82
C9orf3-208ENST00000451893 SYNE2Q8WXH0 6885 aaKnown RBP9.93□□□□□ -0.82
C9orf3-208ENST00000451893 H0YAA0 97 aa9.89□□□□□ -0.83
C9orf3-208ENST00000451893 PSPHP1O15172 72 aa9.86□□□□□ -0.83
C9orf3-208ENST00000451893 Q5VV11 94 aa9.81□□□□□ -0.84
C9orf3-208ENST00000451893 A6NN06 94 aa9.77□□□□□ -0.85
C9orf3-208ENST00000451893 ADM2Q7Z4H4 148 aa9.74□□□□□ -0.85
C9orf3-208ENST00000451893 KRTAP6-3Q3LI67 103 aa9.73□□□□□ -0.85
C9orf3-208ENST00000451893 A0A1B0GU33 70 aa9.69□□□□□ -0.86
C9orf3-208ENST00000451893 SPRR2GQ9BYE4 73 aa9.69□□□□□ -0.86
C9orf3-208ENST00000451893 UQCR11O14957 56 aa9.67□□□□□ -0.86
C9orf3-208ENST00000451893 MT1BP07438 61 aa9.65□□□□□ -0.86
C9orf3-208ENST00000451893 A6NED7 52 aa9.63□□□□□ -0.87
C9orf3-208ENST00000451893 P0C880 135 aa9.63□□□□□ -0.87
C9orf3-208ENST00000451893 KRTAP19-8Q3LI54 63 aa9.63□□□□□ -0.87
C9orf3-208ENST00000451893 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
C9orf3-208ENST00000451893 M0QZ58 72 aa9.55□□□□□ -0.88
C9orf3-208ENST00000451893 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
C9orf3-208ENST00000451893 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
C9orf3-208ENST00000451893 KRTAP10-5P60370 271 aa9.5□□□□□ -0.89
C9orf3-208ENST00000451893 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
C9orf3-208ENST00000451893 R4GN34 69 aa9.44□□□□□ -0.9
C9orf3-208ENST00000451893 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
C9orf3-208ENST00000451893 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
C9orf3-208ENST00000451893 NEBP20929 6669 aa9.29□□□□□ -0.92
C9orf3-208ENST00000451893 MUC12Q9UKN1 5478 aa9.27□□□□□ -0.93
C9orf3-208ENST00000451893 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
C9orf3-208ENST00000451893 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
C9orf3-208ENST00000451893 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
C9orf3-208ENST00000451893 A8MU10 97 aa9.24□□□□□ -0.93
C9orf3-208ENST00000451893 A0A0D9SG42 100 aa9.21□□□□□ -0.94
C9orf3-208ENST00000451893 K7ERS5 55 aa9.21□□□□□ -0.94
C9orf3-208ENST00000451893 KRTAP5-9P26371 169 aa9.18□□□□□ -0.94
C9orf3-208ENST00000451893 LINC01554Q52M75 96 aa9.16□□□□□ -0.94
C9orf3-208ENST00000451893 KRTAP20-1Q3LI63 56 aa9.15□□□□□ -0.94
C9orf3-208ENST00000451893 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
C9orf3-208ENST00000451893 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
C9orf3-208ENST00000451893 KMT2DO14686 5537 aa9.03□□□□□ -0.96
C9orf3-208ENST00000451893 MT1XP80297 61 aa9.03□□□□□ -0.96
C9orf3-208ENST00000451893 SPRR2FQ96RM1 72 aa9.02□□□□□ -0.97
C9orf3-208ENST00000451893 KRTAP12-2P59991 146 aa9.01□□□□□ -0.97
C9orf3-208ENST00000451893 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
C9orf3-208ENST00000451893 PMAIP1Q13794 54 aa8.96□□□□□ -0.98
C9orf3-208ENST00000451893 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
C9orf3-208ENST00000451893 SPRR2EP22531 72 aa8.93□□□□□ -0.98
C9orf3-208ENST00000451893 SPRR2BP35325 72 aa8.93□□□□□ -0.98
C9orf3-208ENST00000451893 SPRR2AP35326 72 aa8.93□□□□□ -0.98
C9orf3-208ENST00000451893 KRTAP2-3P0C7H8 128 aa8.84□□□□□ -0.99
C9orf3-208ENST00000451893 KRTAP2-4Q9BYR9 128 aa8.84□□□□□ -0.99
C9orf3-208ENST00000451893 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
C9orf3-208ENST00000451893 ROMO1P60602 79 aa8.73□□□□□ -1.01
C9orf3-208ENST00000451893 KRTAP4-8A0A0G2JLE6 195 aa8.7□□□□□ -1.02
C9orf3-208ENST00000451893 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
C9orf3-208ENST00000451893 LCE1AQ5T7P2 110 aa8.67□□□□□ -1.02
C9orf3-208ENST00000451893 KRTAP10-7P60409 375 aaPredicted RBP8.65□□□□□ -1.02
C9orf3-208ENST00000451893 SPRR2DP22532 72 aa8.64□□□□□ -1.03
C9orf3-208ENST00000451893 KRTAP10-12P60413 245 aa8.58□□□□□ -1.04
C9orf3-208ENST00000451893 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
C9orf3-208ENST00000451893 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
C9orf3-208ENST00000451893 KRTAP2-2Q9BYT5 123 aa8.56□□□□□ -1.04
C9orf3-208ENST00000451893 KRTAP2-1Q9BYU5 128 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms